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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAX is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
59.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
56.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
55.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
49.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
45.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
43.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
43.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
41.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
37.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
36.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
35.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
35.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
34.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
31.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
30.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
30.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
30.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
30.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
29.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
29.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
29.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
29.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
28.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
28.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
28.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
27.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
27.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
27.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
27.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
26.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
26.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
26.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
26.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
26.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
25.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
25.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
25.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
25.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
24.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
24.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
24.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
24.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
24.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
23.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
23.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
23.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
23.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
23.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
23.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
23.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
23.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
22.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
22.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
22.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
22.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
22.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
22.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
22.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
22.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
22.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
21.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
21.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
21.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
21.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
21.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
21.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
21.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
21.2
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
21.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
20.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
20.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
20.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
20.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
20.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
20.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
20.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
20.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
20.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
20.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
20.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
20.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
20.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
20.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
19.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
19.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
19.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
19.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
19.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
19.5
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
19.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
19.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
19.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
19.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
19.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
19.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
19.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
19.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
19.2
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
19.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
19.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
19.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
19.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
19.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
19.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
18.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
18.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
18.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
18.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
18.8
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
18.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
18.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
18.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
18.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
18.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
18.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
18.6
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
18.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
18.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
18.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
18.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
18.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
18.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
18.0
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
18.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
17.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
17.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
17.7
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
17.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
17.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
17.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
17.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
17.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
17.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
17.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
17.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
17.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
17.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
17.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
17.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
17.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
16.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
16.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
16.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
16.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
16.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
16.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
16.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
16.5
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
16.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
16.5
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
16.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
16.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
16.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
16.3
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
16.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
16.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
16.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
16.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
16.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
16.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
16.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
16.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
16.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
16.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
15.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
15.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
15.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
15.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
15.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
15.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
15.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
15.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
15.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
15.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
15.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
15.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
15.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
15.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
15.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
15.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
15.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
15.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
15.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
15.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
15.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
15.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
15.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
15.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
15.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
15.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
15.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
15.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
14.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
14.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
14.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
14.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
14.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
14.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
14.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
14.8
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
14.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
14.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
14.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
14.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
14.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
14.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
14.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
14.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
14.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
14.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
14.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
14.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
14.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
14.1
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
14.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
14.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
14.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
13.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
13.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
13.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
13.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
13.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
13.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
13.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
13.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
13.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
13.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
13.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
13.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
13.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
13.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
13.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
13.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
13.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
13.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
13.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
13.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
13.1
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
13.0
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
12.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
12.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
12.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
12.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
12.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
12.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
12.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
12.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
12.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
12.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
12.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
12.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
12.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
12.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
12.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
12.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
12.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
12.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
12.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
12.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
12.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
12.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
12.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
12.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
12.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
11.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
11.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
11.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
11.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
11.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
11.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
11.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
11.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
11.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
11.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
11.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
11.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
11.4
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
11.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
11.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
11.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
11.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
11.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
11.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
11.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
11.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
11.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
11.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
10.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
10.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
10.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
10.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
10.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
10.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
10.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
10.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
10.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
10.7
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
10.7
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
10.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
10.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
10.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
10.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
10.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
10.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
10.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
10.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
10.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
10.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
10.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
10.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
10.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
10.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
10.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
10.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
10.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
9.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
9.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
9.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
9.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
9.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
9.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
9.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.3
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
9.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
9.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
9.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
9.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
9.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
9.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
9.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
8.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
8.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
8.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
8.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
8.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
8.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
8.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
8.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
8.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
8.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
8.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
8.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
7.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
7.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
7.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
7.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
7.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
7.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
7.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
7.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
7.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
6.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
6.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
5.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
5.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAX is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.7
Number of samples
231
Samples
Sample
Description
TPM
DO45287
0 years, male, NA, stage:1, alive, 390 days
52.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
47.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
42.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
40.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
40.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
38.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
36.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
34.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
33.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
33.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
33.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
32.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
32.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
32.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
32.1
DO45251
0 years, female, NA, stage:2, alive, 900 days
32.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
31.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
31.3
DO48747
0 years, male, NA, stage:3, alive, 540 days
30.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
30.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
29.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
29.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
29.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
28.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
28.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
28.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
28.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
28.2
DO50800
0 years, male, NA, stage:2, alive, 510 days
27.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
27.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
27.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
27.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
27.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
26.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
26.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
26.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
26.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
26.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
26.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
26.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
25.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
25.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
25.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
25.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
25.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
25.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
24.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
24.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
23.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
23.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
23.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
23.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
23.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
23.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
22.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
22.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
22.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
22.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
22.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
22.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
22.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
22.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
21.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
21.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
21.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
21.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
21.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
21.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
21.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
21.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
21.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
21.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
21.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
20.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
20.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
20.6
DO45139
0 years, male, NA, stage:3, alive, 1320 days
20.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
20.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
20.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
20.3
DO23537
0 years, male, NA, stage:2, dead, 900 days
20.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
19.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
19.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
19.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
19.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
19.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
19.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
19.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
19.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
19.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
19.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
19.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
18.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
18.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
18.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
18.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
18.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
18.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
18.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
18.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
18.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
18.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
17.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
17.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
17.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
17.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
17.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
17.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
17.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
17.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
17.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
17.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
17.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
17.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
17.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
17.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
17.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
16.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
16.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
16.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
16.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
16.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
16.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
16.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
16.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
16.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
16.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
16.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
16.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
16.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
16.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
16.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
16.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
16.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
16.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
16.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
16.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
15.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
15.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
15.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
15.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
15.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
15.4
DO45161
0 years, male, NA, stage:2, dead, 540 days
15.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
15.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
15.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
15.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
15.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
15.3
DO45137
0 years, male, NA, stage:1, alive, 1320 days
15.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
15.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
14.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
14.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
14.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
14.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
14.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
14.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
14.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
14.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
14.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
14.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
14.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
13.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
13.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
13.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
13.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
13.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
13.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
13.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
13.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
13.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
13.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
13.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
13.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
13.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
13.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
13.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
13.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
13.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
12.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
12.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
12.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
12.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
12.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
12.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
12.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
12.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
12.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
12.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
12.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
12.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
12.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
11.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
11.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
11.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
11.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
11.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
11.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
11.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
11.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
11.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
11.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
11.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
11.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
11.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
11.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
11.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
10.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
10.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
10.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
10.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
10.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
10.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
10.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
10.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
10.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
9.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
9.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
9.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
9.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
8.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
8.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
8.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
8.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
8.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
7.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
7.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
7.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
7.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
7.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
6.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
211
Tumor
1.2
467
Tumor
0.9
975
Tumor
0.8
536
Normal
0.8
473
Tumor
0.8
814
Normal
0.8
852
Normal
0.7
478
Normal
0.7
497
Tumor
0.7
471
Tumor
0.7
1044
Normal
0.7
1043
Tumor
0.7
943
Tumor
0.7
385
Tumor
0.7
434
Normal
0.7
447
Tumor
0.7
213
Tumor
0.7
461
Tumor
0.7
823
Tumor
0.6
857
Tumor
0.6
444
Normal
0.6
192
Normal
0.6
217
Tumor
0.6
661
Tumor
0.6
743
Tumor
0.6
455
Tumor
0.6
817
Tumor
0.6
224
Normal
0.6
818
Normal
0.5
492
Normal
0.5
813
Tumor
0.5
535
Tumor
0.5
493
Tumor
0.5
697
Tumor
0.5
777
Tumor
0.5
698
Normal
0.5
881
Tumor
0.5
816
Normal
0.5
1041
Tumor
0.5
1015
Tumor
0.5
861
Tumor
0.5
298
Normal
0.5
963
Tumor
0.5
384
Normal
0.5
865
Tumor
0.5
448
Normal
0.5
212
Normal
0.5
297
Tumor
0.5
724
Normal
0.5
332
Normal
0.5
343
Tumor
0.5
498
Normal
0.5
737
Tumor
0.4
283
Tumor
0.4
952
Normal
0.4
191
Tumor
0.4
524
Normal
0.4
355
Tumor
0.4
188
Normal
0.4
1046
Normal
0.4
185
Tumor
0.4
858
Normal
0.4
954
Normal
0.4
523
Tumor
0.4
851
Tumor
0.4
128
Normal
0.4
195
Tumor
0.4
863
Tumor
0.4
221
Tumor
0.4
955
Tumor
0.4
744
Normal
0.3
393
Tumor
0.3
695
Tumor
0.3
516
Normal
0.3
956
Normal
0.3
494
Normal
0.3
574
Normal
0.3
938
Normal
0.3
364
Normal
0.3
785
Tumor
0.3
824
Normal
0.3
354
Normal
0.3
415
Tumor
0.3
491
Tumor
0.3
411
Tumor
0.3
883
Tumor
0.3
352
Normal
0.3
232
Normal
0.3
366
Normal
0.3
383
Tumor
0.3
218
Normal
0.3
463
Tumor
0.3
223
Tumor
0.3
135
Tumor
0.3
1045
Tumor
0.2
958
Normal
0.2
913
Tumor
0.2
1042
Normal
0.2
433
Tumor
0.2
126
Normal
0.2
738
Normal
0.2
362
Normal
0.2
285
Tumor
0.2
513
Tumor
0.2
131
Tumor
0.2
525
Tumor
0.2
268
Normal
0.2
967
Tumor
0.2
187
Tumor
0.2
395
Tumor
0.2
533
Tumor
0.2
214
Normal
0.2
284
Normal
0.2
1028
Normal
0.2
445
Tumor
0.2
874
Normal
0.2
358
Normal
0.2
468
Normal
0.2
978
Normal
0.2
196
Normal
0.2
515
Tumor
0.2
937
Tumor
0.2
526
Normal
0.2
412
Normal
0.2
538
Normal
0.2
451
Tumor
0.2
534
Normal
0.2
363
Tumor
0.2
563
Tumor
0.2
641
Tumor
0.1
1025
Tumor
0.1
114
Normal
0.1
573
Tumor
0.1
686
Normal
0.1
518
Normal
0.1
966
Normal
0.1
968
Normal
0.1
976
Normal
0.1
375
Tumor
0.1
262
Normal
0.1
456
Normal
0.1
756
Normal
0.1
344
Normal
0.1
477
Tumor
0.1
1031
Tumor
0.1
517
Tumor
0.1
965
Tumor
0.1
721
Tumor
0.1
416
Normal
0.1
944
Normal
0.1
452
Normal
0.1
386
Normal
0.1
723
Tumor
0.1
353
Tumor
0.1
113
Tumor
0.1
716
Normal
0.1
545
Tumor
0.1
558
Normal
0.1
125
Tumor
0.1
514
Normal
0.1
727
Tumor
0.1
328
Normal
0.1
342
Normal
0.1
357
Tumor
0.1
146
Normal
0.1
161
Tumor
0.1
884
Normal
0.1
672
Normal
0.1
951
Tumor
0.1
953
Tumor
0.1
272
Normal
0.1
715
Tumor
0.1
557
Tumor
0.1
356
Normal
0.1
145
Tumor
0.0
222
Normal
0.0
462
Normal
0.0
138
Normal
0.0
864
Normal
0.0
741
Tumor
0.0
914
Normal
0.0
228
Normal
0.0
983
Tumor
0.0
361
Tumor
0.0
286
Normal
0.0
755
Tumor
0.0
432
Normal
0.0
124
Normal
0.0
778
Normal
0.0
481
Tumor
0.0
815
Tumor
0.0
376
Normal
0.0
1014
Normal
0.0
483
Tumor
0.0
528
Normal
0.0
527
Tumor
0.0
878
Normal
0.0
396
Normal
0.0
877
Tumor
0.0
446
Normal
0.0
112
Tumor
0.0
368
Normal
0.0
742
Normal
0.0
912
Normal
0.0
964
Normal
0.0
882
Normal
0.0
367
Tumor
0.0
488
Normal
0.0
868
Normal
0.0
1016
Normal
0.0
487
Tumor
0.0
472
Normal
0.0
696
Normal
0.0
277
Tumor
0.0
628
Normal
0.0
977
Tumor
0.0
351
Tumor
0.0
866
Normal
0.0
331
Tumor
0.0
957
Tumor
-0.1
142
Normal
-0.1
663
Tumor
-0.1
554
Normal
-0.1
474
Normal
-0.1
365
Tumor
-0.1
728
Normal
-0.1
546
Normal
-0.1
127
Tumor
-0.1
147
Tumor
-0.1
1022
Normal
-0.1
484
Normal
-0.1
392
Normal
-0.1
662
Normal
-0.1
466
Normal
-0.1
981
Tumor
-0.1
862
Normal
-0.1
553
Tumor
-0.1
786
Normal
-0.1
616
Normal
-0.1
311
Tumor
-0.1
745
Tumor
-0.1
341
Tumor
-0.1
387
Tumor
-0.1
984
Normal
-0.1
714
Normal
-0.1
911
Tumor
-0.1
391
Tumor
-0.1
617
Tumor
-0.1
136
Normal
-0.1
258
Normal
-0.1
537
Tumor
-0.1
722
Normal
-0.1
482
Normal
-0.1
162
Normal
-0.1
141
Tumor
-0.1
231
Tumor
-0.2
123
Tumor
-0.2
132
Normal
-0.2
1026
Normal
-0.2
148
Normal
-0.2
572
Normal
-0.2
666
Normal
-0.2
664
Normal
-0.2
431
Tumor
-0.2
464
Normal
-0.2
564
Normal
-0.2
312
Normal
-0.2
271
Tumor
-0.2
1032
Normal
-0.2
186
Normal
-0.2
713
Tumor
-0.2
443
Tumor
-0.2
111
Normal
-0.2
172
Normal
-0.2
867
Tumor
-0.2
1013
Tumor
-0.2
314
Normal
-0.2
388
Normal
-0.2
394
Normal
-0.2
278
Normal
-0.2
1027
Tumor
-0.2
648
Normal
-0.3
671
Tumor
-0.3
465
Tumor
-0.3
137
Tumor
-0.3
665
Tumor
-0.3
873
Tumor
-0.3
746
Normal
-0.3
568
Normal
-0.3
982
Normal
-0.3
267
Tumor
-0.3
642
Normal
-0.3
647
Tumor
-0.3
627
Tumor
-0.4
567
Tumor
-0.4
435
Tumor
-0.4
227
Tumor
-0.4
257
Tumor
-0.4
261
Tumor
-0.4
615
Tumor
-0.4
635
Tumor
-0.4
171
Tumor
-0.4
1021
Tumor
-0.5
313
Tumor
-0.5
636
Normal
-0.5
571
Tumor
-0.5
436
Normal
-0.5
618
Normal
-0.5
685
Tumor
-0.6
327
Tumor
-0.6
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
413
Tumor
N/A
414
Normal
N/A
421
Tumor
N/A
422
Normal
N/A
423
Tumor
N/A
424
Normal
N/A
425
Tumor
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
