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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
149.4
nTPM
GTEx:
149.4
nTPM
FANTOM5:
62.8
Scaled Tags Per Million
Pig:
66.1
nTPM
Mouse:
198.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
149.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 149.4
Samples: 105
Max nTPM: 297.0
Min nTPM: 92.8
Std nTPM: 35.4
Median nTPM:
491_1
89 years, female
297.0
2_1
77 years, female
231.0
413_1
59 years, female
227.3
490_1
67 years, female
226.4
139_1
64 years, female
224.8
149_1
88 years, male
217.3
32_1
67 years, male
213.6
43_1
64 years, female
212.4
322_1
76 years, male
199.9
501_1
88 years, male
196.3
145_1
84 years, male
193.6
81_1
67 years, male
189.4
415_1
77 years, female
187.2
89_1
63 years, male
186.8
142_1
61 years, female
184.5
315_1
62 years, female
183.0
117_1
61 years, male
181.8
18_1
88 years, male
180.8
495_1
57 years, female
180.3
17_1
71 years, male
179.7
4_1
88 years, female
178.5
324_1
76 years, male
177.3
6_1
73 years, female
176.1
307_1
66 years, female
175.7
120_1
70 years, female
174.4
217_1
76 years, male
172.4
518_1
75 years, female
172.0
288_1
66 years, female
170.4
316_1
62 years, male
170.3
153_1
70 years, female
169.1
348_1
84 years, male
168.2
162_1
79 years, female
167.7
41_1
94 years, female
166.6
35_1
74 years, female
162.0
137_1
83 years, male
160.5
321_1
62 years, female
160.4
42_1
85 years, male
159.9
109_1
81 years, female
155.4
447_1
81 years, male
154.4
126_1
63 years, male
154.1
314_1
67 years, male
154.0
9_1
66 years, female
153.6
396_1
62 years, male
153.6
229_1
69 years, female
153.4
466_1
57 years, female
152.9
115_1
83 years, male
152.7
119_1
70 years, female
150.4
265_1
87 years, male
149.1
526_1
61 years, male
148.0
517_1
88 years, male
146.0
291_1
76 years, male
143.6
414_1
84 years, female
143.3
313_1
79 years, female
141.0
499_1
55 years, female
141.0
375_1
74 years, female
140.2
254_1
77 years, female
139.9
335_1
73 years, female
139.1
468_1
89 years, male
137.3
386_1
76 years, male
136.9
99_1
64 years, male
136.6
173_1
67 years, male
135.9
318_1
68 years, male
135.6
320_1
89 years, female
135.4
404_1
82 years, female
134.5
347_1
72 years, male
131.5
237_1
82 years, male
130.5
353_1
82 years, female
130.5
405_1
91 years, male
128.6
246_1
77 years, male
126.8
243_1
75 years, male
126.5
389_1
86 years, female
125.6
377_1
82 years, female
125.5
292_1
71 years, male
124.6
379_1
60 years, male
123.6
317_1
60 years, male
123.4
189_1
76 years, male
121.7
295_1
61 years, female
121.0
452_1
88 years, female
119.7
503_1
68 years, male
119.5
293_1
68 years, female
118.9
218_1
71 years, female
118.5
350_1
84 years, female
118.5
506_1
65 years, male
118.4
311_1
78 years, male
118.0
351_1
91 years, male
118.0
480_1
63 years, male
117.6
264_1
73 years, female
117.5
384_1
83 years, male
117.3
319_1
81 years, male
117.1
406_1
79 years, male
116.9
266_1
85 years, male
116.7
286_1
68 years, female
116.4
251_1
78 years, male
115.2
354_1
81 years, female
115.0
352_1
62 years, male
114.3
355_1
70 years, female
113.3
308_1
70 years, female
112.3
425_1
59 years, female
110.6
172_1
72 years, female
110.3
376_1
75 years, female
105.0
349_1
83 years, male
102.3
163_1
78 years, male
100.5
177_1
74 years, male
98.9
356_1
87 years, female
97.9
394_1
75 years, female
92.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.