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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CLPP is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
84.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
240.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
192.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
186.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
181.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
178.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
171.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
166.2
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
158.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
158.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
156.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
155.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
153.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
153.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
151.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
147.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
147.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
146.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
143.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
141.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
141.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
139.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
138.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
138.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
137.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
135.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
133.5
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
130.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
130.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
130.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
130.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
130.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
129.6
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
128.7
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
128.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
128.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
127.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
127.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
126.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
126.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
125.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
125.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
124.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
124.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
124.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
124.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
123.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
123.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
122.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
122.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
120.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
120.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
120.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
120.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
119.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
118.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
117.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
117.3
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
116.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
116.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
115.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
115.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
114.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
113.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
112.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
112.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
112.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
112.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
111.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
111.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
110.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
110.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
108.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
106.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
106.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
105.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
105.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
104.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
103.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
103.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
103.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
103.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
102.8
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
102.1
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
101.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
100.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
100.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
100.1
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
99.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
99.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
99.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
99.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
99.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
97.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
96.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
96.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
96.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
96.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
96.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
96.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
95.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
95.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
95.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
95.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
95.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
95.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
94.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
94.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
94.0
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
93.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
93.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
93.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
92.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
92.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
92.1
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
91.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
91.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
91.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
91.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
90.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
90.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
90.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
90.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
89.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
89.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
89.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
89.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
89.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
89.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
88.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
88.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
88.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
88.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
87.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
87.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
87.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
86.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
86.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
86.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
86.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
86.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
86.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
85.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
85.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
85.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
85.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
85.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
84.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
84.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
83.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
83.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
83.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
83.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
83.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
82.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
82.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
82.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
82.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
82.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
82.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
81.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
81.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
81.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
81.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
81.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
81.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
80.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
80.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
80.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
80.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
80.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
79.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
79.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
79.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
79.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
78.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
78.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
78.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
78.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
78.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
78.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
78.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
78.2
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
78.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
77.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
77.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
77.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
77.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
77.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
77.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
77.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
76.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
76.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
76.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
76.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
76.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
76.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
75.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
75.2
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
75.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
74.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
74.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
74.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
74.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
74.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
74.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
74.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
74.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
73.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
73.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
73.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
73.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
73.1
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
73.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
72.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
72.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
72.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
72.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
72.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
71.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
71.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
71.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
71.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
70.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
70.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
70.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
70.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
70.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
69.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
69.9
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
69.9
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
69.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
69.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
69.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
68.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
68.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
68.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
68.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
68.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
68.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
67.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
67.4
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
67.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
67.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
67.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
67.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
67.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
66.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
66.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
66.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
66.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
66.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
66.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
66.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
66.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
66.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
65.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
65.4
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
65.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
64.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
64.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
64.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
64.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
63.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
63.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
63.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
63.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
63.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
62.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
62.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
62.6
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
62.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
62.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
62.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
62.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
62.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
62.0
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
61.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
61.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
61.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
61.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
61.3
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
61.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
61.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
60.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
60.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
59.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
59.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
59.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
59.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
59.1
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
59.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
59.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
58.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
58.5
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
58.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
58.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
58.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
58.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
57.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
57.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
57.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
57.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
57.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
56.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
56.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
56.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
56.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
55.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
55.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
55.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
55.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
55.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
54.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
54.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
54.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
54.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
54.5
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
54.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
54.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
54.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
54.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
53.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
53.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
52.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
52.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
52.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
51.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
51.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
51.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
50.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
50.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
50.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
50.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
49.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
49.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
49.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
48.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
47.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
47.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
47.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
47.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
47.0
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
46.4
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
46.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
45.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
45.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
44.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
43.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
42.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
42.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
42.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
41.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
41.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
40.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
39.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
39.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
38.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
37.7
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
34.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
33.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
33.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CLPP is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.4
Number of samples
231
Samples
Sample
Description
TPM
DO50839
0 years, female, NA, stage:3, alive, 330 days
76.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
64.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
55.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
50.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
49.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
44.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
43.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
43.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
42.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
42.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
42.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
41.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
41.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
40.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
40.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
40.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
40.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
39.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
39.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
39.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
39.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
38.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
37.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
37.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
37.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
37.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
37.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
37.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
36.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
36.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
36.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
36.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
35.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
35.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
35.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
35.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
34.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
34.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
34.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
33.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
33.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
33.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
33.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
33.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
32.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
32.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
32.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
32.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
32.3
DO45275
0 years, male, NA, stage:3, dead, 10 days
32.2
DO23515
0 years, male, NA, stage:2, alive, 1230 days
32.1
DO50819
0 years, female, NA, stage:2, alive, 510 days
32.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
31.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
31.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
31.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
31.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
31.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
31.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
30.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
30.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
30.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
30.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
30.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
30.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
30.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
30.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
29.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
29.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
29.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
29.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
29.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
28.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
28.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
28.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
28.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
28.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
28.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
27.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
27.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
27.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
27.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
27.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
27.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
27.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
27.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
27.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
27.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
26.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
26.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
26.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
26.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
26.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
26.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
26.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
26.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
26.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
26.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
26.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
25.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
25.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
25.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
25.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
25.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
25.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
25.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
25.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
25.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
25.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
25.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
24.6
DO23536
0 years, male, NA, stage:2, alive, 930 days
24.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
24.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
24.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
23.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
23.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
23.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
23.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
23.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
23.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
23.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
23.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
23.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
23.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
23.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
23.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
23.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
23.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
23.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
23.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
23.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
23.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
22.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
22.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
22.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
22.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
22.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
22.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
22.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
22.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
22.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
22.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
21.8
DO48682
0 years, female, NA, stage:3, dead, 120 days
21.6
DO23551
0 years, male, NA, stage:3, dead, 150 days
21.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
21.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
21.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
20.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
20.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
20.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
20.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
20.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
20.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
20.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
20.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
20.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
20.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
20.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
20.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
20.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
20.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
19.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
19.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
19.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
19.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
19.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
19.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
19.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
19.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
19.3
DO45107
0 years, female, NA, stage:2, alive, 1710 days
19.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
19.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
18.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
18.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
18.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
18.5
DO23512
0 years, male, NA, stage:1, alive, 1260 days
18.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
18.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
18.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
18.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
18.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
17.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
17.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
17.7
DO23532
0 years, female, NA, stage:1, alive, 960 days
17.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
17.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
17.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
17.0
DO23527
0 years, male, NA, stage:1, alive, 1050 days
17.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
16.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
16.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
16.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
16.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
16.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
16.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
16.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
16.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
16.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
16.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
16.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
16.1
DO45247
0 years, female, NA, stage:2, alive, 210 days
16.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
16.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
15.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
15.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
15.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
15.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
15.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
14.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
14.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
14.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
14.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
14.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
13.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
13.9
DO45195
0 years, male, NA, stage:1, alive, 390 days
13.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
13.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
13.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
13.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
12.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
12.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
12.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
11.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
11.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
11.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
11.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
10.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
10.0
DO45197
0 years, male, NA, stage:2, alive, 1170 days
9.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
9.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
9.4
DO50815
0 years, male, NA, stage:3, alive, 150 days
6.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
557
Tumor
1.2
487
Tumor
1.0
513
Tumor
1.0
1041
Tumor
1.0
937
Tumor
1.0
393
Tumor
0.9
915
Tumor
0.9
697
Tumor
0.8
865
Tumor
0.8
715
Tumor
0.8
465
Tumor
0.8
785
Tumor
0.8
925
Tumor
0.7
285
Tumor
0.7
223
Tumor
0.7
755
Tumor
0.7
483
Tumor
0.6
665
Tumor
0.6
615
Tumor
0.6
431
Tumor
0.6
423
Tumor
0.6
452
Normal
0.6
411
Tumor
0.6
953
Tumor
0.6
473
Tumor
0.6
227
Tumor
0.6
145
Tumor
0.6
267
Tumor
0.5
462
Normal
0.5
627
Tumor
0.5
911
Tumor
0.5
361
Tumor
0.5
328
Normal
0.5
1013
Tumor
0.5
526
Normal
0.5
484
Normal
0.5
686
Normal
0.5
1014
Normal
0.5
1025
Tumor
0.5
983
Tumor
0.5
944
Normal
0.5
481
Tumor
0.5
964
Normal
0.4
488
Normal
0.4
356
Normal
0.4
1032
Normal
0.4
523
Tumor
0.4
823
Tumor
0.4
922
Normal
0.4
534
Normal
0.4
515
Tumor
0.4
446
Normal
0.4
558
Normal
0.4
538
Normal
0.4
976
Normal
0.4
514
Normal
0.4
954
Normal
0.4
1043
Tumor
0.4
468
Normal
0.4
648
Normal
0.4
1028
Normal
0.4
851
Tumor
0.4
1046
Normal
0.4
716
Normal
0.3
685
Tumor
0.3
568
Normal
0.3
786
Normal
0.3
494
Normal
0.3
628
Normal
0.3
311
Tumor
0.3
142
Normal
0.3
162
Normal
0.3
696
Normal
0.3
546
Normal
0.3
873
Tumor
0.3
392
Normal
0.3
491
Tumor
0.3
394
Normal
0.3
857
Tumor
0.3
714
Normal
0.3
746
Normal
0.3
938
Normal
0.3
977
Tumor
0.3
388
Normal
0.3
963
Tumor
0.3
756
Normal
0.3
742
Normal
0.3
616
Normal
0.3
172
Normal
0.3
554
Normal
0.3
472
Normal
0.3
981
Tumor
0.3
858
Normal
0.3
572
Normal
0.3
958
Normal
0.3
924
Normal
0.3
466
Normal
0.3
912
Normal
0.3
618
Normal
0.3
984
Normal
0.3
414
Normal
0.2
363
Tumor
0.2
474
Normal
0.2
314
Normal
0.2
1045
Tumor
0.2
1022
Normal
0.2
436
Normal
0.2
432
Normal
0.2
926
Normal
0.2
698
Normal
0.2
723
Tumor
0.2
376
Normal
0.2
364
Normal
0.2
128
Normal
0.2
148
Normal
0.2
571
Tumor
0.2
722
Normal
0.2
195
Tumor
0.2
564
Normal
0.2
461
Tumor
0.2
868
Normal
0.2
448
Normal
0.2
124
Normal
0.2
524
Normal
0.2
368
Normal
0.2
365
Tumor
0.2
867
Tumor
0.2
982
Normal
0.2
916
Normal
0.2
186
Normal
0.2
196
Normal
0.2
492
Normal
0.2
478
Normal
0.2
344
Normal
0.2
641
Tumor
0.2
518
Normal
0.2
212
Normal
0.2
918
Normal
0.2
463
Tumor
0.2
881
Tumor
0.2
498
Normal
0.2
354
Normal
0.2
1031
Tumor
0.2
114
Normal
0.2
1027
Tumor
0.2
352
Normal
0.2
191
Tumor
0.2
815
Tumor
0.2
443
Tumor
0.1
464
Normal
0.1
882
Normal
0.1
222
Normal
0.1
967
Tumor
0.1
968
Normal
0.1
482
Normal
0.1
664
Normal
0.1
528
Normal
0.1
642
Normal
0.1
672
Normal
0.1
636
Normal
0.1
383
Tumor
0.1
395
Tumor
0.1
396
Normal
0.1
357
Tumor
0.1
286
Normal
0.1
864
Normal
0.1
331
Tumor
0.1
137
Tumor
0.1
955
Tumor
0.1
1016
Normal
0.1
1026
Normal
0.1
327
Tumor
0.1
978
Normal
0.1
298
Normal
0.1
412
Normal
0.1
663
Tumor
0.1
384
Normal
0.1
187
Tumor
0.1
113
Tumor
0.1
884
Normal
0.1
426
Normal
0.1
866
Normal
0.1
147
Tumor
0.1
877
Tumor
0.1
738
Normal
0.1
536
Normal
0.1
332
Normal
0.1
824
Normal
0.1
141
Tumor
0.1
874
Normal
0.1
1015
Tumor
0.1
666
Normal
0.1
553
Tumor
0.1
913
Tumor
0.1
1044
Normal
0.1
862
Normal
0.1
516
Normal
0.1
883
Tumor
0.1
228
Normal
0.1
342
Normal
0.1
471
Tumor
0.1
467
Tumor
0.0
424
Normal
0.0
434
Normal
0.0
662
Normal
0.0
647
Tumor
0.0
413
Tumor
0.0
451
Tumor
0.0
952
Normal
0.0
126
Normal
0.0
138
Normal
0.0
1042
Normal
0.0
444
Normal
0.0
527
Tumor
0.0
111
Normal
0.0
878
Normal
0.0
362
Normal
0.0
271
Tumor
0.0
778
Normal
0.0
861
Tumor
0.0
214
Normal
0.0
258
Normal
0.0
218
Normal
0.0
574
Normal
0.0
358
Normal
0.0
852
Normal
0.0
728
Normal
0.0
224
Normal
0.0
132
Normal
0.0
272
Normal
0.0
353
Tumor
0.0
427
Tumor
0.0
284
Normal
0.0
221
Tumor
0.0
744
Normal
0.0
277
Tumor
0.0
232
Normal
0.0
943
Tumor
0.0
416
Normal
0.0
445
Tumor
0.0
818
Normal
0.0
966
Normal
0.0
278
Normal
0.0
567
Tumor
0.0
211
Tumor
-0.1
777
Tumor
-0.1
415
Tumor
-0.1
136
Normal
-0.1
422
Normal
-0.1
914
Normal
-0.1
814
Normal
-0.1
923
Tumor
-0.1
743
Tumor
-0.1
123
Tumor
-0.1
217
Tumor
-0.1
721
Tumor
-0.1
312
Normal
-0.1
125
Tumor
-0.1
135
Tumor
-0.1
428
Normal
-0.1
741
Tumor
-0.1
231
Tumor
-0.1
724
Normal
-0.1
535
Tumor
-0.1
262
Normal
-0.1
695
Tumor
-0.1
493
Tumor
-0.1
456
Normal
-0.1
957
Tumor
-0.1
447
Tumor
-0.1
737
Tumor
-0.1
816
Normal
-0.1
455
Tumor
-0.1
956
Normal
-0.1
261
Tumor
-0.1
188
Normal
-0.2
146
Normal
-0.2
386
Normal
-0.2
366
Normal
-0.2
127
Tumor
-0.2
537
Tumor
-0.2
367
Tumor
-0.2
161
Tumor
-0.2
268
Normal
-0.2
131
Tumor
-0.2
297
Tumor
-0.2
863
Tumor
-0.2
355
Tumor
-0.3
375
Tumor
-0.3
917
Tumor
-0.3
573
Tumor
-0.3
387
Tumor
-0.3
975
Tumor
-0.3
813
Tumor
-0.3
727
Tumor
-0.3
545
Tumor
-0.3
351
Tumor
-0.3
497
Tumor
-0.3
921
Tumor
-0.3
533
Tumor
-0.3
563
Tumor
-0.4
171
Tumor
-0.4
185
Tumor
-0.4
951
Tumor
-0.4
192
Normal
-0.4
517
Tumor
-0.4
433
Tumor
-0.4
313
Tumor
-0.4
213
Tumor
-0.4
617
Tumor
-0.5
525
Tumor
-0.5
745
Tumor
-0.5
385
Tumor
-0.5
435
Tumor
-0.5
965
Tumor
-0.5
421
Tumor
-0.6
635
Tumor
-0.6
671
Tumor
-0.6
283
Tumor
-0.6
341
Tumor
-0.6
112
Tumor
-0.6
477
Tumor
-0.6
391
Tumor
-0.7
661
Tumor
-0.7
257
Tumor
-0.7
713
Tumor
-0.7
1021
Tumor
-0.8
425
Tumor
-1.0
817
Tumor
-1.0
343
Tumor
-1.1
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.