HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:39.2 nTPM
HPA Brain:62.7 nTPM
GTEx:39.2 nTPM
FANTOM5:127.0 Scaled Tags Per Million
Pig:30.3 nTPM
Mouse:57.0 nTPM
Allen mouse:14.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022793Antibody HPA070752
Glial cells HighMedium
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 62.7
Sample id Sample description nTPM
Hippocampus
nTPM: 58.4
2621 Female, age 67, right hemisphere 64.4
2529 Female, age 94, left hemisphere 62.3
2148 Female, age 91, left hemisphere 62.0
1898 Male, age 80, left hemisphere 60.6
1855 Male, age 76, left hemisphere 55.3
1911 Female, age 85, right hemisphere 45.9
Dentate gyrus
nTPM: 57.2
2531 Female, age 67, both hemispheres 68.1
2530 Female, age 94, left hemisphere 66.6
1927 Female, age 91, both hemispheres 56.2
2010 Male, age 76, both hemispheres 55.2
2246 Female, age 85, both hemispheres 51.3
2528 Male, age 74, both hemispheres 45.7
Entorhinal gyrus
nTPM: 59.7
1787 Male, age 76, left hemisphere 62.5
2613 Female, age 94, left hemisphere 62.4
2764 Male, age 80, right hemisphere 62.2
1938 Female, age 85, left hemisphere 61.3
2686 Male, age 75, right hemisphere 59.5
2117 Female, age 91, right hemisphere 50.3
Hippocampus, CA1
nTPM: 59.2
2749 Male, age 80, left hemisphere 78.7
1873 Female, age 85, both hemispheres 58.3
2045 Male, age 76, both hemispheres 55.8
2527 Male, age 74, both hemispheres 54.0
2082 Female, age 91, right hemisphere 49.1
Hippocampus, CA2
nTPM: 54.3
1892 Male, age 76, both hemispheres 70.7
2437 Female, age 94, left hemisphere 56.2
1940 Female, age 85, left hemisphere 53.8
1963 Male, age 80, left hemisphere 51.1
2113 Female, age 91, right hemisphere 49.9
2249 Male, age 74, both hemispheres 44.3
Hippocampus, CA3
nTPM: 60.0
2861 Female, age 67, both hemispheres 75.8
2620 Female, age 94, left hemisphere 67.7
2137 Male, age 80, left hemisphere 63.8
1867 Male, age 76, both hemispheres 59.0
2436 Male, age 74, both hemispheres 49.0
1891 Female, age 85, both hemispheres 44.7
Parahippocampal cortex
nTPM: 57.2
2245 Female, age 91, both hemispheres 68.1
2532 Female, age 72, left hemisphere 64.0
2622 Female, age 67, right hemisphere 63.7
1850 Male, age 80, both hemispheres 62.8
1933 Female, age 85, both hemispheres 55.2
2250 Female, age 67, right hemisphere 53.5
1990 Female, age 91, right hemisphere 53.1
2693 Female, age 94, both hemispheres 51.4
2018 Male, age 76, both hemispheres 50.6
2692 Male, age 74, both hemispheres 50.0
Perirhinal gyrus
nTPM: 62.7
1794 Male, age 80, right hemisphere 69.8
1847 Female, age 91, left hemisphere 66.6
1841 Female, age 85, right hemisphere 63.4
2848 Male, age 76, right hemisphere 57.9
2521 Female, age 94, right hemisphere 55.4
Subiculum
nTPM: 50.6
1977 Female, age 85, both hemispheres 56.5
2619 Male, age 74, both hemispheres 51.3
2438 Female, age 94, left hemisphere 51.0
1901 Male, age 80, both hemispheres 50.1
2042 Male, age 76, both hemispheres 48.9
2729 Female, age 91, right hemisphere 46.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 39.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.2
Samples: 197

Max nTPM: 141.8
Min nTPM: 21.3
Std nTPM: 11.5
Median nTPM: 37.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 141.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 72.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 63.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 59.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 59.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 57.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 55.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 55.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 55.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 54.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 54.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 127.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 127.0
FF:10169-103B7 60 years, female 128.7
FF:10153-102I9 76 years, female 125.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 30.3
Pig sample Sample description nTPM
Subiculum
nTPM: 27.1
Samples: 4

Max nTPM: 34.8
Min nTPM: 23.1
Sample A Female 34.8
Sample B Female 24.9
Sample C Male 25.7
Sample D Male 23.1
Dorsal hippocampus
nTPM: 30.3
Samples: 4

Max nTPM: 36.0
Min nTPM: 25.7
Sample A Female 36.0
Sample B Female 28.4
Sample C Male 31.0
Sample D Male 25.7
Entorhinal cortex
nTPM: 23.8
Samples: 4

Max nTPM: 25.5
Min nTPM: 22.9
Sample A Female 25.5
Sample B Female 23.7
Sample C Male 23.2
Sample D Male 22.9
Ventral hippocampus
nTPM: 28.4
Samples: 4

Max nTPM: 35.0
Min nTPM: 22.0
Sample A Female 26.5
Sample B Female 22.0
Sample C Male 35.0
Sample D Male 29.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 57.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.0
Samples: 4

Max nTPM: 57.2
Min nTPM: 56.6
Sample A Male 57.0
Sample B Male 56.6
Sample C Female 57.2
Sample D Female 57.1
Hippocampal formation
nTPM: 56.3
Samples: 4

Max nTPM: 60.0
Min nTPM: 52.2
Sample A Male 54.0
Sample B Male 52.2
Sample C Female 58.8
Sample D Female 60.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 14.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.7
68203445 Antisense, RP_041018_01_C04, Mouse strain C57BL/6J (56 days, male) 14.7
67870080 Antisense, RP_041018_01_C04, Mouse strain C57BL/6J (56 days, male) 14.4

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