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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PAX8 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
62.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
212.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
127.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
123.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
117.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
115.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
112.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
108.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
107.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
106.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
104.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
102.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
92.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
90.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
86.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
86.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
85.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
79.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
77.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
76.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
74.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
74.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
66.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
66.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
62.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
61.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
59.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
59.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
57.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
57.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
56.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
56.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
55.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
52.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
51.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
50.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
49.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
48.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
48.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
48.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
46.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
46.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
45.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
44.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
42.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
42.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
40.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
39.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
39.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
38.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
37.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
36.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
35.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
34.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
33.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
30.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
29.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
28.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
28.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
27.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
23.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
22.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
21.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PAX8 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
148.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
146.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
145.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
135.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
134.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
134.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
130.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
126.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
113.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
110.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
110.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
108.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
106.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
102.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
102.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
97.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
96.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
95.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
93.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
92.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
91.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
90.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
90.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
88.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
87.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
85.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
84.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
84.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
83.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
83.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
81.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
81.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
80.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
78.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
78.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
77.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
76.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
73.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
73.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
73.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
73.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
73.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
73.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
72.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
72.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
72.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
71.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
71.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
70.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
70.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
69.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
69.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
69.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
69.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
68.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
67.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
67.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
67.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
67.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
66.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
66.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
66.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
65.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
65.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
65.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
64.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
64.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
64.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
64.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
64.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
63.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
63.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
63.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
63.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
63.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
62.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
62.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
62.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
61.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
61.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
61.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
61.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
61.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
60.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
60.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
60.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
60.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
60.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
59.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
59.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
59.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
59.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
59.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
58.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
58.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
58.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
58.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
58.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
57.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
57.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
57.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
57.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
56.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
56.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
55.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
55.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
55.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
55.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
55.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
55.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
55.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
54.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
54.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
54.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
54.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
53.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
53.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
53.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
53.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
53.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
52.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
52.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
52.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
52.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
52.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
52.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
52.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
52.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
51.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
51.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
51.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
51.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
51.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
50.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
50.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
50.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
50.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
50.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
50.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
50.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
50.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
50.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
49.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
49.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
49.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
49.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
49.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
48.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
48.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
48.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
48.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
48.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
48.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
47.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
47.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
47.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
47.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
46.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
46.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
46.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
46.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
46.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
46.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
46.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
45.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
45.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
45.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
45.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
45.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
45.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
45.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
45.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
45.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
45.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
45.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
45.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
45.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
45.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
45.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
44.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
44.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
44.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
44.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
44.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
44.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
43.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
43.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
43.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
43.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
43.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
43.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
43.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
43.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
43.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
43.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
43.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
43.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
43.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
43.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
42.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
42.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
42.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
42.5
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
42.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
42.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
42.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
42.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
41.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
41.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
41.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
41.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
41.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
41.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
41.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
40.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
40.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
40.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
40.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
40.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
40.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
40.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
39.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
39.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
39.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
39.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
39.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
39.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
39.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
39.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
39.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
39.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
39.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
39.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
39.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
39.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
38.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
38.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
38.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
38.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
38.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
37.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
37.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
37.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
37.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
37.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
37.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
37.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
37.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
37.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
37.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
36.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
36.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
36.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
36.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
36.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
36.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
36.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
36.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
36.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
35.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
35.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
35.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
35.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
35.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
35.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
35.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
35.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
34.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
34.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
34.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
34.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
34.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
34.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
34.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
34.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
34.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
33.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
33.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
33.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
33.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
33.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
33.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
33.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
33.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
33.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
33.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
33.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
33.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
32.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
32.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
32.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
32.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
32.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
32.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
32.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
32.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
32.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
32.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
31.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
31.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
31.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
31.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
31.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
31.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
31.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
31.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
31.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
31.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
31.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
31.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
30.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
30.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
30.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
30.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
30.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
30.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
30.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
30.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
30.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
30.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
30.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
30.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
30.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
30.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
30.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
30.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
30.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
30.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
30.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
30.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
30.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
30.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
30.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
30.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
29.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
29.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
29.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
29.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
29.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
29.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
29.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
29.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
29.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
29.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
29.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
29.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
29.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
28.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
28.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
28.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
28.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
28.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
28.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
28.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
28.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
28.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
28.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
28.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
28.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
28.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
27.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
27.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
27.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
27.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
27.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
27.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
27.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
27.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
27.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
26.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
26.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
26.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
26.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
26.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
26.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
26.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
26.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
26.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
25.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
25.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
25.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
25.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
25.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
25.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
25.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
25.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
25.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
24.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
24.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
24.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
24.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
24.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
24.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
24.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
24.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
24.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
24.3
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
24.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
23.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
23.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
23.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
23.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
23.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
23.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
23.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
23.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
23.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
23.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
22.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
22.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
22.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
22.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
22.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
22.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
22.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
21.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
21.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
21.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
21.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
21.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
21.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
21.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
21.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
20.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
20.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
20.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
20.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
20.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
19.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
19.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
19.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
19.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
19.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
19.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
19.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
19.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
19.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
19.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
19.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
18.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
18.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
18.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
18.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
18.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
18.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
17.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
17.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
17.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
17.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
17.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
17.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
17.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
16.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
16.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
16.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
16.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
16.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
16.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
16.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
16.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
16.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
16.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
16.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
15.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
14.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
14.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
14.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
14.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
14.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
14.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
14.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
14.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
14.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
13.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
13.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
13.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
13.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
13.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
12.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
12.0
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
11.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
11.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
10.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
9.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
9.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
9.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
9.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
6.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
5.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
4.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
3.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
2.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
2.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PAX8 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
157.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
155.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
144.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
117.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
111.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
103.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
94.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
90.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
87.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
86.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
86.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
85.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
85.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
84.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
81.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
80.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
80.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
77.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
77.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
77.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
76.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
73.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
73.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
71.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
71.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
67.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
66.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
65.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
61.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
61.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
59.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
58.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
58.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
56.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
53.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
52.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
52.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
51.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
51.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
51.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
50.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
50.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
49.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
49.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
48.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
48.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
48.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
47.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
47.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
46.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
46.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
46.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
46.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
44.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
44.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
43.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
42.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
41.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
41.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
41.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
40.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
39.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
39.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
38.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
38.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
36.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
35.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
33.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
33.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
33.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
32.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
32.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
31.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
31.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
29.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
29.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
27.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
26.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
25.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
24.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
24.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
24.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
23.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
23.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
23.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
22.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
22.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
21.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
20.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
20.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
19.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
18.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
17.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PAX8 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
149.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
553.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
531.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
425.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
404.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
399.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
364.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
337.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
336.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
329.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
325.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
313.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
306.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
304.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
300.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
297.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
294.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
287.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
286.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
283.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
276.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
276.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
269.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
264.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
259.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
256.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
255.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
254.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
252.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
251.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
240.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
240.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
239.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
239.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
238.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
236.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
233.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
231.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
230.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
230.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
226.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
226.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
225.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
225.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
224.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
223.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
223.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
223.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
222.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
216.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
211.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
209.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
208.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
206.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
206.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
202.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
199.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
199.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
199.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
198.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
196.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
196.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
190.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
190.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
189.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
188.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
185.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
185.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
184.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
183.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
183.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
183.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
182.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
182.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
181.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
180.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
179.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
179.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
179.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
178.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
178.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
177.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
177.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
177.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
174.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
174.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
174.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
174.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
173.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
172.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
172.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
172.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
172.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
172.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
171.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
170.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
170.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
168.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
167.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
167.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
167.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
165.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
165.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
164.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
164.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
164.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
163.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
163.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
163.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
162.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
161.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
161.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
161.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
161.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
160.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
159.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
158.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
158.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
158.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
158.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
157.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
157.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
156.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
155.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
155.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
154.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
154.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
153.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
152.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
152.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
152.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
151.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
151.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
151.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
150.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
149.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
148.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
148.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
147.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
146.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
146.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
145.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
144.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
142.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
142.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
141.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
139.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
138.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
137.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
133.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
133.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
132.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
131.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
131.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
129.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
129.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
126.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
124.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
123.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
123.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
123.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
121.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
120.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
120.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
119.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
119.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
119.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
119.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
119.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
118.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
117.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
117.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
116.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
116.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
114.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
114.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
114.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
113.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
112.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
111.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
111.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
111.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
110.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
110.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
110.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
108.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
107.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
107.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
106.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
104.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
104.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
104.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
103.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
101.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
101.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
100.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
100.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
100.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
98.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
98.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
97.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
97.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
96.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
96.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
94.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
92.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
92.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
92.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
91.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
91.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
91.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
90.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
89.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
89.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
88.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
88.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
87.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
86.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
85.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
85.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
80.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
80.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
80.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
79.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
78.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
78.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
78.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
78.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
77.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
76.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
76.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
76.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
76.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
76.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
74.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
73.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
72.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
71.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
71.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
70.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
70.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
70.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
67.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
67.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
66.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
65.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
65.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
65.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
64.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
63.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
62.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
62.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
62.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
61.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
61.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
60.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
59.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
58.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
56.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
55.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
54.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
54.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
54.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
53.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
53.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
51.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
51.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
50.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
50.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
45.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
43.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
43.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
41.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
38.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
38.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
38.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
35.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
35.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
27.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
24.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
15.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
9.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
1.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012640003
Normal
1.1
CPT0079510001
Normal
1.1
CPT0088970003
Tumor
1.0
CPT0078800003
Tumor
0.8
CPT0001230001
Normal
0.7
CPT0009020003
Normal
0.7
CPT0078830003
Tumor
0.7
CPT0012920003
Normal
0.6
CPT0079300001
Normal
0.5
CPT0025580004
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0017850003
Tumor
0.4
CPT0001190001
Normal
0.4
CPT0007870001
Normal
0.4
CPT0012900004
Tumor
0.4
CPT0076350001
Normal
0.4
CPT0075170001
Normal
0.4
CPT0084590001
Normal
0.4
CPT0092190003
Normal
0.4
CPT0063330001
Normal
0.4
CPT0088480003
Tumor
0.4
CPT0020130001
Normal
0.4
CPT0088640003
Normal
0.4
CPT0086890003
Normal
0.4
CPT0012550003
Tumor
0.4
CPT0001270001
Normal
0.3
CPT0002370001
Normal
0.3
CPT0006440003
Tumor
0.3
CPT0012180003
Tumor
0.3
CPT0025920001
Normal
0.3
CPT0017450001
Normal
0.3
CPT0012090003
Normal
0.3
CPT0075570001
Normal
0.3
CPT0064400001
Normal
0.3
CPT0063640001
Normal
0.3
CPT0077320001
Normal
0.3
CPT0078530001
Normal
0.3
CPT0078660003
Tumor
0.3
CPT0069190001
Normal
0.3
CPT0006530001
Normal
0.3
CPT0001510001
Normal
0.3
CPT0014130001
Normal
0.3
CPT0078940001
Normal
0.3
CPT0009080003
Normal
0.3
CPT0012570003
Normal
0.3
CPT0019160001
Normal
0.3
CPT0010120001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0007320003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0088920001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0086820003
Tumor
0.2
CPT0020020001
Normal
0.2
CPT0079430001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0025060001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0081620001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0014450004
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0086370003
Normal
0.2
CPT0065820001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0009000003
Tumor
0.2
CPT0001550001
Normal
0.2
CPT0001350001
Normal
0.2
CPT0086830003
Normal
0.2
CPT0088500001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0014370004
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0026420001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0000790001
Normal
0.1
CPT0007470001
Normal
0.1
CPT0011410003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0006950001
Normal
0.1
CPT0089480003
Normal
0.1
CPT0088570001
Normal
0.1
CPT0078840001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0023350003
Tumor
0.0
CPT0009060003
Tumor
0.0
CPT0081990003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0013790003
Normal
0.0
CPT0079180003
Tumor
0.0
CPT0001340003
Tumor
0.0
CPT0012370003
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0006900003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0088710001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0079270003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0012770003
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0000870016
Tumor
-0.2
CPT0017410003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0071150004
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0015730003
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0078930003
Tumor
-0.3
CPT0024670003
Tumor
-0.3
CPT0077310003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0007860003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0089020003
Tumor
-0.4
CPT0069160003
Tumor
-0.4
CPT0015810003
Tumor
-0.4
CPT0088630003
Tumor
-0.4
CPT0010160003
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0078990003
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0075720003
Tumor
-0.4
CPT0025230003
Tumor
-0.4
CPT0086950003
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0086870003
Tumor
-0.4
CPT0088760003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0088900003
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0025350003
Tumor
-0.5
CPT0079380003
Tumor
-0.5
CPT0025290003
Tumor
-0.5
CPT0001540009
Tumor
-0.5
CPT0065690003
Tumor
-0.5
CPT0076330003
Tumor
-0.5
CPT0021240003
Tumor
-0.6
CPT0025050003
Tumor
-0.6
CPT0012080003
Tumor
-0.6
CPT0000640003
Tumor
-0.7
CPT0001500009
Tumor
-0.7
CPT0011240003
Tumor
-0.8
CPT0085670003
Tumor
-0.8
CPT0063630003
Tumor
-0.8
CPT0077490003
Tumor
-0.9
CPT0086030003
Tumor
-0.9
CPT0019990003
Tumor
-0.9
CPT0092730003
Tumor
-0.9
CPT0025880003
Tumor
-1.0
CPT0075560003
Tumor
-1.0
CPT0023690003
Tumor
-1.1
CPT0066480003
Tumor
-1.1
CPT0092790003
Tumor
-1.2
CPT0092290003
Tumor
-1.4
CPT0088550004
Tumor
-2.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
