HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:10.4 nTPM
HPA Brain:8.2 nTPM
GTEx:10.4 nTPM
FANTOM5:16.6 Scaled Tags Per Million
Mouse:12.4 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000160
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 8.2
Sample id Sample description nTPM
Hippocampus
nTPM: 7.4
2621 Female, age 67, right hemisphere 9.3
2148 Female, age 91, left hemisphere 7.7
2529 Female, age 94, left hemisphere 7.7
1898 Male, age 80, left hemisphere 7.3
1855 Male, age 76, left hemisphere 6.6
1911 Female, age 85, right hemisphere 5.6
Dentate gyrus
nTPM: 7.6
2528 Male, age 74, both hemispheres 7.9
2010 Male, age 76, both hemispheres 7.7
2246 Female, age 85, both hemispheres 7.7
2531 Female, age 67, both hemispheres 7.7
1927 Female, age 91, both hemispheres 7.5
2530 Female, age 94, left hemisphere 7.3
Entorhinal gyrus
nTPM: 7.5
1787 Male, age 76, left hemisphere 8.5
2764 Male, age 80, right hemisphere 8.1
2117 Female, age 91, right hemisphere 7.8
2613 Female, age 94, left hemisphere 7.3
1938 Female, age 85, left hemisphere 7.0
2686 Male, age 75, right hemisphere 6.2
Hippocampus, CA1
nTPM: 8.0
2045 Male, age 76, both hemispheres 9.0
2749 Male, age 80, left hemisphere 8.4
2527 Male, age 74, both hemispheres 8.3
1873 Female, age 85, both hemispheres 7.8
2082 Female, age 91, right hemisphere 6.3
Hippocampus, CA2
nTPM: 7.4
1892 Male, age 76, both hemispheres 8.7
1963 Male, age 80, left hemisphere 8.5
2249 Male, age 74, both hemispheres 8.3
2437 Female, age 94, left hemisphere 6.7
1940 Female, age 85, left hemisphere 6.1
2113 Female, age 91, right hemisphere 6.0
Hippocampus, CA3
nTPM: 7.2
2436 Male, age 74, both hemispheres 8.5
2620 Female, age 94, left hemisphere 7.7
2137 Male, age 80, left hemisphere 7.2
1891 Female, age 85, both hemispheres 7.0
1867 Male, age 76, both hemispheres 6.9
2861 Female, age 67, both hemispheres 6.1
Parahippocampal cortex
nTPM: 7.4
2532 Female, age 72, left hemisphere 9.0
1850 Male, age 80, both hemispheres 8.3
2245 Female, age 91, both hemispheres 7.6
1990 Female, age 91, right hemisphere 7.5
2250 Female, age 67, right hemisphere 7.5
1933 Female, age 85, both hemispheres 7.4
2693 Female, age 94, both hemispheres 7.3
2622 Female, age 67, right hemisphere 6.8
2018 Male, age 76, both hemispheres 6.5
2692 Male, age 74, both hemispheres 6.2
Perirhinal gyrus
nTPM: 8.2
1794 Male, age 80, right hemisphere 9.2
1841 Female, age 85, right hemisphere 8.5
1847 Female, age 91, left hemisphere 8.2
2521 Female, age 94, right hemisphere 7.8
2848 Male, age 76, right hemisphere 7.4
Subiculum
nTPM: 6.8
1977 Female, age 85, both hemispheres 8.8
2619 Male, age 74, both hemispheres 7.2
1901 Male, age 80, both hemispheres 6.8
2042 Male, age 76, both hemispheres 6.5
2438 Female, age 94, left hemisphere 5.8
2729 Female, age 91, right hemisphere 5.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.4
Samples: 197

Max nTPM: 23.2
Min nTPM: 5.6
Std nTPM: 2.2
Median nTPM: 10.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 23.2
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 18.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 16.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 15.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 15.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 14.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 14.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 14.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 14.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 14.1
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 14.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 16.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.6
FF:10153-102I9 76 years, female 18.8
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 12.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.2
Samples: 4

Max nTPM: 11.3
Min nTPM: 9.4
Sample A Male 10.1
Sample B Male 9.9
Sample C Female 11.3
Sample D Female 9.4
Hippocampal formation
nTPM: 12.4
Samples: 4

Max nTPM: 14.7
Min nTPM: 10.9
Sample A Male 12.6
Sample B Male 10.9
Sample C Female 11.3
Sample D Female 14.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
69202394 Antisense, RP_050324_03_F02, Mouse strain C57BL/6J (56 days, male) 2.7

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