HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:52.6 nTPM
HPA Brain:74.8 nTPM
GTEx:52.6 nTPM
FANTOM5:89.6 Scaled Tags Per Million
Pig:134.4 nTPM
Mouse:214.2 nTPM
Allen mouse:15.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018139Antibody HPA058537
Glial cells LowMedium
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 74.8
Sample id Sample description nTPM
Hippocampus
nTPM: 53.3
1898 Male, age 80, left hemisphere 72.9
1855 Male, age 76, left hemisphere 58.3
2621 Female, age 67, right hemisphere 54.9
1911 Female, age 85, right hemisphere 50.4
2148 Female, age 91, left hemisphere 43.0
2529 Female, age 94, left hemisphere 40.5
Dentate gyrus
nTPM: 52.9
1927 Female, age 91, both hemispheres 67.6
2010 Male, age 76, both hemispheres 60.7
2528 Male, age 74, both hemispheres 57.5
2530 Female, age 94, left hemisphere 45.8
2246 Female, age 85, both hemispheres 43.8
2531 Female, age 67, both hemispheres 41.9
Entorhinal gyrus
nTPM: 53.5
2764 Male, age 80, right hemisphere 63.7
2613 Female, age 94, left hemisphere 56.4
1787 Male, age 76, left hemisphere 55.7
1938 Female, age 85, left hemisphere 53.3
2117 Female, age 91, right hemisphere 50.5
2686 Male, age 75, right hemisphere 41.2
Hippocampus, CA1
nTPM: 64.3
2749 Male, age 80, left hemisphere 109.0
2527 Male, age 74, both hemispheres 57.7
1873 Female, age 85, both hemispheres 54.2
2082 Female, age 91, right hemisphere 53.3
2045 Male, age 76, both hemispheres 47.4
Hippocampus, CA2
nTPM: 63.4
2249 Male, age 74, both hemispheres 83.9
1892 Male, age 76, both hemispheres 77.4
1963 Male, age 80, left hemisphere 67.3
1940 Female, age 85, left hemisphere 51.6
2113 Female, age 91, right hemisphere 50.6
2437 Female, age 94, left hemisphere 49.6
Hippocampus, CA3
nTPM: 70.0
2436 Male, age 74, both hemispheres 131.8
2137 Male, age 80, left hemisphere 86.2
1867 Male, age 76, both hemispheres 68.1
2620 Female, age 94, left hemisphere 51.8
1891 Female, age 85, both hemispheres 49.6
2861 Female, age 67, both hemispheres 32.6
Parahippocampal cortex
nTPM: 55.5
1850 Male, age 80, both hemispheres 79.2
1990 Female, age 91, right hemisphere 62.9
2245 Female, age 91, both hemispheres 57.2
2693 Female, age 94, both hemispheres 56.4
2250 Female, age 67, right hemisphere 55.6
1933 Female, age 85, both hemispheres 55.4
2018 Male, age 76, both hemispheres 53.0
2532 Female, age 72, left hemisphere 52.8
2692 Male, age 74, both hemispheres 44.2
2622 Female, age 67, right hemisphere 38.6
Perirhinal gyrus
nTPM: 74.8
1794 Male, age 80, right hemisphere 88.4
1847 Female, age 91, left hemisphere 83.4
1841 Female, age 85, right hemisphere 73.5
2521 Female, age 94, right hemisphere 69.0
2848 Male, age 76, right hemisphere 59.7
Subiculum
nTPM: 52.7
1901 Male, age 80, both hemispheres 66.9
1977 Female, age 85, both hemispheres 59.8
2042 Male, age 76, both hemispheres 51.4
2619 Male, age 74, both hemispheres 50.7
2438 Female, age 94, left hemisphere 44.0
2729 Female, age 91, right hemisphere 43.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 52.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.6
Samples: 197

Max nTPM: 100.6
Min nTPM: 25.7
Std nTPM: 16.1
Median nTPM: 49.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 100.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 97.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 95.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 95.4
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 89.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 88.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 87.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 86.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 82.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 82.3
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 82.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 89.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.6
FF:10169-103B7 60 years, female 102.8
FF:10153-102I9 76 years, female 76.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 134.4
Pig sample Sample description nTPM
Subiculum
nTPM: 120.6
Samples: 4

Max nTPM: 144.4
Min nTPM: 112.1
Sample A Female 144.4
Sample B Female 112.5
Sample C Male 113.3
Sample D Male 112.1
Dorsal hippocampus
nTPM: 134.4
Samples: 4

Max nTPM: 160.2
Min nTPM: 102.7
Sample A Female 160.2
Sample B Female 137.9
Sample C Male 136.6
Sample D Male 102.7
Entorhinal cortex
nTPM: 119.0
Samples: 4

Max nTPM: 135.4
Min nTPM: 103.6
Sample A Female 126.5
Sample B Female 135.4
Sample C Male 110.6
Sample D Male 103.6
Ventral hippocampus
nTPM: 127.9
Samples: 4

Max nTPM: 154.1
Min nTPM: 93.5
Sample A Female 150.9
Sample B Female 93.5
Sample C Male 154.1
Sample D Male 113.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 214.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 198.3
Samples: 4

Max nTPM: 218.5
Min nTPM: 190.4
Sample A Male 193.7
Sample B Male 190.5
Sample C Female 190.4
Sample D Female 218.5
Hippocampal formation
nTPM: 214.2
Samples: 4

Max nTPM: 234.6
Min nTPM: 200.1
Sample A Male 200.1
Sample B Male 214.5
Sample C Female 234.6
Sample D Female 207.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.9
76115728 Antisense, RP_060620_02_B07, Mouse strain C57BL/6J (56 days, male) 17.0
69734500 Antisense, RP_050503_01_A09, Mouse strain C57BL/6J (56 days, male) 14.9

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