HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:14.7 nTPM
HPA Brain:26.6 nTPM
GTEx:14.7 nTPM
FANTOM5:28.9 Scaled Tags Per Million
Pig:23.9 nTPM
Mouse:23.7 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041131Antibody HPA041214
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 26.6
Sample id Sample description nTPM
Hippocampus
nTPM: 22.2
1898 Male, age 80, left hemisphere 27.6
1855 Male, age 76, left hemisphere 26.0
2621 Female, age 67, right hemisphere 24.7
2148 Female, age 91, left hemisphere 20.2
1911 Female, age 85, right hemisphere 19.5
2529 Female, age 94, left hemisphere 15.5
Dentate gyrus
nTPM: 21.8
2010 Male, age 76, both hemispheres 25.5
1927 Female, age 91, both hemispheres 23.6
2531 Female, age 67, both hemispheres 21.6
2246 Female, age 85, both hemispheres 21.4
2528 Male, age 74, both hemispheres 20.3
2530 Female, age 94, left hemisphere 18.6
Entorhinal gyrus
nTPM: 24.5
1938 Female, age 85, left hemisphere 30.7
1787 Male, age 76, left hemisphere 30.4
2764 Male, age 80, right hemisphere 28.5
2613 Female, age 94, left hemisphere 26.4
2117 Female, age 91, right hemisphere 16.0
2686 Male, age 75, right hemisphere 14.9
Hippocampus, CA1
nTPM: 26.6
2749 Male, age 80, left hemisphere 38.7
2045 Male, age 76, both hemispheres 31.8
1873 Female, age 85, both hemispheres 23.7
2082 Female, age 91, right hemisphere 19.4
2527 Male, age 74, both hemispheres 19.3
Hippocampus, CA2
nTPM: 22.8
1892 Male, age 76, both hemispheres 30.9
2437 Female, age 94, left hemisphere 24.3
1963 Male, age 80, left hemisphere 23.7
1940 Female, age 85, left hemisphere 20.2
2249 Male, age 74, both hemispheres 20.2
2113 Female, age 91, right hemisphere 17.9
Hippocampus, CA3
nTPM: 25.7
2137 Male, age 80, left hemisphere 37.7
2620 Female, age 94, left hemisphere 27.8
1867 Male, age 76, both hemispheres 25.9
2436 Male, age 74, both hemispheres 21.6
1891 Female, age 85, both hemispheres 20.7
2861 Female, age 67, both hemispheres 20.3
Parahippocampal cortex
nTPM: 20.3
1850 Male, age 80, both hemispheres 27.0
1990 Female, age 91, right hemisphere 22.9
2018 Male, age 76, both hemispheres 22.5
2693 Female, age 94, both hemispheres 20.8
1933 Female, age 85, both hemispheres 19.8
2245 Female, age 91, both hemispheres 19.1
2532 Female, age 72, left hemisphere 19.0
2692 Male, age 74, both hemispheres 18.7
2250 Female, age 67, right hemisphere 16.8
2622 Female, age 67, right hemisphere 16.5
Perirhinal gyrus
nTPM: 24.6
1847 Female, age 91, left hemisphere 30.9
1794 Male, age 80, right hemisphere 24.9
2848 Male, age 76, right hemisphere 24.2
2521 Female, age 94, right hemisphere 23.2
1841 Female, age 85, right hemisphere 20.0
Subiculum
nTPM: 21.7
1901 Male, age 80, both hemispheres 28.4
2042 Male, age 76, both hemispheres 27.2
1977 Female, age 85, both hemispheres 25.3
2619 Male, age 74, both hemispheres 17.3
2729 Female, age 91, right hemisphere 16.7
2438 Female, age 94, left hemisphere 15.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.7
Samples: 197

Max nTPM: 27.7
Min nTPM: 6.4
Std nTPM: 4.2
Median nTPM: 14.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 27.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 25.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 23.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 23.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 23.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 23.5
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 22.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 22.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 22.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 22.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 28.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.9
FF:10169-103B7 60 years, female 37.3
FF:10153-102I9 76 years, female 20.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 23.9
Pig sample Sample description nTPM
Subiculum
nTPM: 21.9
Samples: 4

Max nTPM: 23.6
Min nTPM: 20.3
Sample A Female 23.6
Sample B Female 20.3
Sample C Male 22.8
Sample D Male 20.9
Dorsal hippocampus
nTPM: 23.5
Samples: 4

Max nTPM: 27.1
Min nTPM: 20.5
Sample A Female 25.5
Sample B Female 27.1
Sample C Male 20.5
Sample D Male 20.9
Entorhinal cortex
nTPM: 23.9
Samples: 4

Max nTPM: 31.0
Min nTPM: 20.4
Sample A Female 31.0
Sample B Female 22.3
Sample C Male 22.0
Sample D Male 20.4
Ventral hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 24.9
Min nTPM: 19.0
Sample A Female 22.5
Sample B Female 19.0
Sample C Male 21.7
Sample D Male 24.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 23.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.7
Samples: 4

Max nTPM: 23.0
Min nTPM: 20.7
Sample A Male 20.7
Sample B Male 21.4
Sample C Female 21.7
Sample D Female 23.0
Hippocampal formation
nTPM: 23.7
Samples: 4

Max nTPM: 25.7
Min nTPM: 21.6
Sample A Male 24.2
Sample B Male 23.4
Sample C Female 25.7
Sample D Female 21.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68269300 Antisense, RP_041129_01_F08, Mouse strain C57BL/6J (56 days, male) 0.3

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