We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BBS2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
49.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
40.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
40.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
36.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
36.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
35.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
33.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
32.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
32.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
31.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
31.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
30.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
30.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
29.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
29.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
29.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
28.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
28.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
27.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
27.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
27.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
27.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
26.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
26.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
26.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
25.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
24.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
24.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
23.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
22.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
22.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
21.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
20.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
20.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
19.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
19.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
19.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
18.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
18.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
18.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
18.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
17.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
17.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
16.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
16.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
15.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
14.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
14.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
13.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
13.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
12.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
12.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
11.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
10.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
10.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
10.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
9.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
9.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
7.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
6.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BBS2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
53.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
50.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
45.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
45.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
43.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
42.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
41.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
40.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
40.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
40.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
39.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
39.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
38.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
38.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
37.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
37.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
37.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
37.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
37.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
37.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
36.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
36.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
36.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
36.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
36.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
35.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
35.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
35.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
35.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
35.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
34.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
34.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
34.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
34.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
34.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
34.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
33.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
33.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
33.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
33.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
33.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
33.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
33.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
32.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
32.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
32.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
32.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
31.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
31.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
31.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
31.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
31.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
31.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
31.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
30.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
30.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
30.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
30.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
30.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
30.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
30.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
30.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
30.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
30.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
30.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
30.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
30.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
30.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
30.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
29.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
29.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
29.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
29.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
29.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
29.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
29.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
29.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
29.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
29.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
29.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
29.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
29.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
29.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
29.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
29.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
29.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
28.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
28.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
28.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
28.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
28.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
28.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
28.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
28.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
28.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
28.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
28.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
28.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
28.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
28.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
28.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
28.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
28.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
28.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
27.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
27.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
27.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
27.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
27.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
27.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
27.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
27.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
27.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
27.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
27.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
27.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
27.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
27.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
27.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
27.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
27.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
26.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
26.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
26.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
26.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
26.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
26.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
26.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
26.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
26.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
26.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
26.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
26.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
26.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
26.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
26.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
26.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
26.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
26.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
26.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
26.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
26.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
26.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
26.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
26.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
25.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
25.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
25.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
25.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
25.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
25.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
25.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
25.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
25.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
25.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
25.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
25.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
25.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
25.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
25.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
25.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
25.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
25.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
25.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
25.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
25.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
25.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
25.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
25.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
25.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
25.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
25.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
25.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
25.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
25.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
25.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
24.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
24.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
24.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
24.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
24.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
24.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
24.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
24.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
24.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
24.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
24.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
24.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
24.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
24.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
24.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
24.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
24.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
24.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
24.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
24.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
24.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
24.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
24.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
24.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
23.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
23.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
23.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
23.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
23.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
23.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
23.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
23.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
23.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
23.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
23.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
23.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
23.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
23.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
23.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
23.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
23.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
23.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
23.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
23.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
23.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
23.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
23.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
23.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
23.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
23.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
23.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
23.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
23.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
22.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
22.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
22.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
22.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
22.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
22.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
22.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
22.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
22.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
22.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
22.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
22.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
22.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
22.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
22.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
22.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
22.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
22.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
22.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
22.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
22.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
22.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
22.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
22.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
22.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
22.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
22.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
22.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
21.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
21.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
21.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
21.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
21.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
21.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
21.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
21.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
21.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
21.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
21.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
21.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
21.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
21.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
21.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
21.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
21.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
21.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
21.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
21.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
21.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
21.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
21.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
21.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
21.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
21.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
21.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
21.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
21.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
20.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
20.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
20.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
20.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
20.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
20.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
20.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
20.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
20.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
20.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
20.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
20.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
20.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
20.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
20.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
20.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
20.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
20.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
20.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
20.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
20.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
20.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
20.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
20.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
20.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
20.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
20.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
20.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
20.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
20.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
19.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
19.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
19.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
19.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
19.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
19.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
19.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
19.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
19.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
19.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
19.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
19.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
19.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
19.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
19.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
19.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
19.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
19.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
19.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
19.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
19.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
19.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
19.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
19.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
19.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
19.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
19.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
19.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
19.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
18.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
18.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
18.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
18.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
18.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
18.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
18.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
18.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
18.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
18.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
18.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
18.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
18.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
18.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
18.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
18.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
18.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
18.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
18.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
18.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
18.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
18.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
18.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
18.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
18.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
18.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
18.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
18.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
17.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
17.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
17.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
17.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
17.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
17.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
17.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
17.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
17.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
17.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
17.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
17.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
17.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
17.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
17.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
17.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
17.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
17.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
17.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
17.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
17.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
17.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
17.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
17.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
16.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
16.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
16.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
16.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
16.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
16.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
16.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
16.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
16.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
16.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
16.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
16.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
16.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
16.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
16.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
15.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
15.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
15.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
15.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
15.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
15.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
15.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
15.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
15.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
15.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
15.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
15.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
15.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
15.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
15.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
15.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
15.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
15.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
15.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
14.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
14.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
14.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
14.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
14.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
14.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
14.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
14.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
14.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
14.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
14.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
14.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
13.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
13.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
13.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
13.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
13.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
12.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
12.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
12.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
12.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
12.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
12.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
12.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
11.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
11.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
11.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
10.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
10.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
9.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
9.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
9.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
9.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
9.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
9.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
7.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
6.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
6.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BBS2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
56.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
49.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
47.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
46.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
44.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
41.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
40.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
39.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
39.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
39.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
39.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
38.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
38.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
38.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
38.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
37.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
36.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
36.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
36.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
36.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
36.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
35.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
35.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
35.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
34.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
34.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
34.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
34.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
33.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
33.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
33.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
33.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
32.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
32.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
31.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
31.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
31.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
30.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
30.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
30.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
29.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
29.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
29.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
29.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
29.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
29.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
29.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
29.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
29.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
28.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
27.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
27.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
27.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
27.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
27.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
27.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
27.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
27.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
26.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
26.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
26.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
26.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
26.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
25.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
25.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
25.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
25.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
24.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
24.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
24.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
23.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
23.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
23.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
23.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
22.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
22.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
22.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
22.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
22.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
21.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
20.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
20.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
20.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
19.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
18.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
18.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
17.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
17.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
17.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
17.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
16.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
16.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
16.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BBS2 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
35.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
100.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
83.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
82.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
75.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
69.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
67.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
67.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
65.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
64.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
64.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
62.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
62.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
62.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
61.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
61.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
61.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
61.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
59.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
59.3
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
59.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
58.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
58.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
58.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
58.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
57.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
57.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
56.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
56.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
56.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
56.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
55.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
55.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
54.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
53.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
53.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
52.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
52.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
52.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
52.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
52.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
51.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
51.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
51.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
51.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
51.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
50.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
49.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
49.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
49.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
49.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
49.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
48.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
48.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
48.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
48.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
48.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
48.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
47.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
47.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
47.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
47.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
47.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
47.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
46.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
46.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
46.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
46.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
46.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
45.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
45.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
45.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
45.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
44.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
44.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
44.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
44.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
44.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
44.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
43.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
43.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
43.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
43.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
43.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
43.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
43.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
43.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
43.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
43.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
42.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
42.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
42.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
42.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
42.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
42.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
42.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
41.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
41.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
41.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
41.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
41.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
40.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
40.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
40.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
40.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
40.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
40.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
39.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
39.4
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
39.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
38.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
38.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
38.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
37.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
37.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
37.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
37.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
37.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
36.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
36.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
36.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
36.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
36.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
36.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
36.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
36.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
36.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
36.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
36.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
36.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
35.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
35.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
35.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
35.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
35.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
35.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
35.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
35.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
34.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
34.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
34.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
34.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
34.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
34.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
34.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
34.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
34.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
33.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
33.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
33.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
33.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
33.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
33.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
33.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
33.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
33.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
33.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
32.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
32.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
32.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
32.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
32.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
31.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
31.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
31.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
31.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
31.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
31.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
31.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
30.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
30.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
30.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
30.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
30.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
30.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
29.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
29.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
29.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
29.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
29.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
29.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
29.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
29.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
29.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
29.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
28.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
28.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
28.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
28.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
28.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
28.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
27.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
27.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
27.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
27.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
27.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
27.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
26.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
26.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
26.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
26.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
26.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
26.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
26.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
26.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
25.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
25.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
25.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
25.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
25.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
25.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
25.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
25.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
25.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
24.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
24.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
24.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
24.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
24.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
23.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
23.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
23.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
23.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
23.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
23.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
23.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
23.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
23.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
22.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
22.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
22.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
22.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
22.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
22.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
21.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
21.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
21.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
21.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
20.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
20.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
20.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
20.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
20.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
19.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
19.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
19.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
19.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
18.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
18.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
17.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
17.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
17.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
16.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
15.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
15.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
15.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
14.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
14.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
14.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
14.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
13.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
12.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
12.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
12.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
11.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
11.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
11.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
10.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
10.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
9.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
7.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
6.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
6.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
5.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
4.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
3.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011410003
Tumor
0.9
CPT0086950003
Tumor
0.7
CPT0078800003
Tumor
0.6
CPT0014450004
Tumor
0.6
CPT0069000003
Tumor
0.6
CPT0079270003
Tumor
0.5
CPT0006950001
Normal
0.4
CPT0002350011
Tumor
0.4
CPT0000660001
Normal
0.4
CPT0001500009
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0012570003
Normal
0.3
CPT0010160003
Tumor
0.3
CPT0088500001
Normal
0.2
CPT0025610001
Normal
0.2
CPT0078990003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0089480003
Normal
0.2
CPT0084590001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0015810003
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0079230003
Tumor
0.2
CPT0010170001
Normal
0.2
CPT0079430001
Normal
0.2
CPT0012770003
Normal
0.2
CPT0092310003
Normal
0.2
CPT0009080003
Normal
0.2
CPT0014130001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0087050003
Normal
0.2
CPT0063320003
Tumor
0.2
CPT0088640003
Normal
0.2
CPT0088780001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0014470001
Normal
0.2
CPT0015910003
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0007860003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0078670001
Normal
0.2
CPT0081620001
Normal
0.2
CPT0077140001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0088970003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0000780007
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0092790003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0002270011
Tumor
0.1
CPT0007470001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0077500001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0012090003
Normal
0.1
CPT0075170001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0066480003
Tumor
0.1
CPT0002370001
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0079410003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0079180003
Tumor
0.0
CPT0026410003
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0012670003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0001540009
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0025350003
Tumor
-0.1
CPT0081990003
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0078660003
Tumor
-0.1
CPT0012900004
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0023690003
Tumor
-0.2
CPT0086870003
Tumor
-0.2
CPT0086820003
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0092740003
Normal
-0.2
CPT0075130003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0084560003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0076330003
Tumor
-0.3
CPT0065750003
Tumor
-0.3
CPT0010110003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0007320003
Tumor
-0.3
CPT0066470004
Tumor
-0.3
CPT0001260009
Tumor
-0.3
CPT0092730003
Tumor
-0.3
CPT0001340003
Tumor
-0.3
CPT0065690003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0023350003
Tumor
-0.4
CPT0089460004
Tumor
-0.4
CPT0015730003
Tumor
-0.4
CPT0014160003
Tumor
-0.4
CPT0012280003
Tumor
-0.4
CPT0012180003
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0001180009
Tumor
-0.5
CPT0075560003
Tumor
-0.5
CPT0065430003
Tumor
-0.6
CPT0025290003
Tumor
-0.6
CPT0088550004
Tumor
-0.6
CPT0081880003
Tumor
-0.6
CPT0086030003
Tumor
-0.7
CPT0088480003
Tumor
-0.7
CPT0012550003
Tumor
-0.8
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
