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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNOT1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
71.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
61.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
60.2
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
54.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
51.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
50.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
47.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
46.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
46.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
42.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
42.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
40.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
39.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
39.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
39.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
39.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
38.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
38.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
38.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
37.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
37.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
36.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
36.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
36.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
36.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
35.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
35.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
33.8
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
32.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
32.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
32.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
31.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
31.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
31.5
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
31.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
30.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
30.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
30.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
30.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
30.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
29.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
29.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
29.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
29.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
28.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
28.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
28.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
28.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
28.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
27.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
27.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
27.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
27.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
27.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
27.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
27.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
26.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
26.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
26.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
26.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
26.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
26.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
26.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
25.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
25.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
25.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
25.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
25.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
24.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
24.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
24.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
24.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
24.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
23.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
23.9
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
23.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
23.7
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
23.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
23.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
23.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
23.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
23.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
23.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
23.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
23.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
23.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
23.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
22.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
22.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
22.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
22.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
22.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
22.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
22.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
22.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
22.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
21.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
21.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
21.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
21.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
21.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
21.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
21.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
20.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
20.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
20.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
20.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
20.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
20.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
20.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
20.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
20.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
19.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
19.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
19.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
19.5
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
19.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
19.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
19.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
19.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
19.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
19.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
19.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
19.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
18.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
18.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
18.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
18.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
18.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
18.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
18.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
18.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
18.4
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
18.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
18.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
17.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
17.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
17.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
17.7
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
17.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
17.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
17.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
17.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
17.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
16.9
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
16.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
16.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
16.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
16.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
16.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
16.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
16.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
16.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
16.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
16.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
16.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
16.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
16.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
16.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
16.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
16.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
16.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
16.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
16.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
15.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
15.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
15.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
15.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
15.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
15.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
15.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
15.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
15.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
15.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
15.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
15.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
14.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
14.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
14.8
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
14.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
14.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
14.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
14.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
14.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
14.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
13.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
13.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
13.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
13.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
13.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
13.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
13.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
13.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
13.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
13.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
13.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
13.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
13.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
12.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
12.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
12.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
12.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
12.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
12.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
12.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
12.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
12.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
12.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
11.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
11.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
11.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
11.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
11.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
11.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
11.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
11.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
11.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
10.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
10.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
10.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
10.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
10.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
10.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
10.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
10.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
10.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
10.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
10.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
10.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
10.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
10.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
10.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
9.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
9.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
9.8
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
9.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
9.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
9.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
9.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
9.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
9.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
9.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
9.1
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
9.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
9.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
8.9
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
8.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
8.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
8.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
8.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
8.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
8.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
8.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
7.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
7.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
7.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
7.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
7.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
6.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
6.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
6.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
6.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
6.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
6.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
6.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6.5
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
6.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
6.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
6.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
6.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
6.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
6.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
6.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
6.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
5.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
5.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
5.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
5.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
5.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
5.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
5.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
5.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
4.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
4.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
4.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
4.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
4.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
4.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
4.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
4.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
4.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
3.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
3.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
3.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
3.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
3.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
3.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
3.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
2.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
2.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
2.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2.6
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
2.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
2.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.2
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
2.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
2.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.9
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
1.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
1.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
1.6
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
1.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
0.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.8
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.3
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CNOT1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.5
Number of samples
231
Samples
Sample
Description
TPM
DO45211
0 years, male, NA, stage:3, alive, 240 days
63.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
50.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
43.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
39.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
31.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
31.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
29.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
29.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
29.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
28.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
27.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
27.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
27.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
27.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
25.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
24.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
24.4
DO48728
0 years, female, NA, stage:2, alive, 150 days
23.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
23.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
23.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
23.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
23.0
DO48746
0 years, male, NA, stage:3, alive, 570 days
22.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
22.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
22.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
22.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
22.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
21.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
21.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
21.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
21.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
21.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
21.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
21.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
20.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
20.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
20.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
20.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
20.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
20.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
20.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
20.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
19.6
DO48677
0 years, male, NA, stage:3, alive, 1140 days
19.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
19.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
19.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
19.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
19.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
19.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
19.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
18.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
18.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
18.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
18.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
18.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
18.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
18.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
18.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
18.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
18.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
18.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
17.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
17.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
17.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
17.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
17.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
17.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
17.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
17.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
17.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
17.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
16.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
16.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
16.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
16.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
16.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
16.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
16.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
16.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
16.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
16.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
16.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
16.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
16.0
DO45235
0 years, female, NA, stage:1, alive, 900 days
16.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
15.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
15.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
15.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
15.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
15.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
15.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
15.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
15.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
15.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
15.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
15.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
15.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
15.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
15.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
15.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
15.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
15.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
14.9
DO45307
0 years, female, NA, stage:4, dead, 240 days
14.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
14.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
14.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
14.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
14.6
DO50791
0 years, female, NA, stage:1, dead, 480 days
14.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
14.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
14.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
14.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
14.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
14.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
14.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
14.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
14.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
14.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
14.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
14.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
14.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
14.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
14.2
DO45141
0 years, male, NA, stage:2, alive, 1320 days
14.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
13.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
13.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
13.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
13.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
13.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
13.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
13.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
13.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
13.4
DO45239
0 years, male, NA, stage:2, alive, 870 days
13.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
13.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
13.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
13.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
12.9
DO45199
0 years, female, NA, stage:2, alive, 1350 days
12.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
12.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
12.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
12.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
12.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
12.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
12.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
12.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
12.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
12.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
12.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
12.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
12.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
12.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
12.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
12.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
12.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
12.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
12.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
12.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
12.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
12.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
12.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
12.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
12.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
11.9
DO45265
0 years, male, NA, stage:3, alive, 1020 days
11.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
11.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
11.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
11.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
11.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
11.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
11.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
11.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
11.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
11.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
11.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
11.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
11.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
11.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
11.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
11.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
11.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
10.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
10.8
DO48672
0 years, male, NA, stage:2, alive, 450 days
10.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
10.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
10.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
10.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
10.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
10.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
10.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
10.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
10.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
9.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
9.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
9.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
9.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
9.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
9.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
9.5
DO23551
0 years, male, NA, stage:3, dead, 150 days
9.4
DO45255
0 years, male, NA, stage:3, alive, 720 days
9.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
9.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
9.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
9.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
9.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
9.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
8.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
8.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
8.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
8.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
8.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
8.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
8.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
8.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
8.3
DO23517
0 years, male, NA, stage:2, alive, 1200 days
8.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
8.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
8.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
8.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
7.9
DO48701
0 years, male, NA, stage:2, alive, 780 days
7.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
7.8
DO23545
0 years, male, NA, stage:2, dead, 570 days
7.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
7.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
7.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
7.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
7.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
6.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
6.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
5.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
5.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
813
Tumor
0.7
965
Tumor
0.6
743
Tumor
0.6
573
Tumor
0.6
527
Tumor
0.6
957
Tumor
0.6
285
Tumor
0.5
497
Tumor
0.5
877
Tumor
0.5
951
Tumor
0.5
983
Tumor
0.5
283
Tumor
0.5
385
Tumor
0.5
147
Tumor
0.5
533
Tumor
0.4
567
Tumor
0.4
727
Tumor
0.4
745
Tumor
0.4
375
Tumor
0.4
661
Tumor
0.4
351
Tumor
0.4
517
Tumor
0.4
713
Tumor
0.4
331
Tumor
0.4
737
Tumor
0.4
112
Tumor
0.4
777
Tumor
0.4
463
Tumor
0.3
395
Tumor
0.3
257
Tumor
0.3
1021
Tumor
0.3
865
Tumor
0.3
131
Tumor
0.3
277
Tumor
0.3
515
Tumor
0.3
814
Normal
0.3
171
Tumor
0.3
427
Tumor
0.3
671
Tumor
0.3
545
Tumor
0.3
231
Tumor
0.3
1025
Tumor
0.3
863
Tumor
0.3
851
Tumor
0.3
413
Tumor
0.3
393
Tumor
0.3
211
Tumor
0.3
917
Tumor
0.3
1027
Tumor
0.3
921
Tumor
0.3
267
Tumor
0.3
123
Tumor
0.3
523
Tumor
0.3
425
Tumor
0.3
937
Tumor
0.2
1013
Tumor
0.2
387
Tumor
0.2
967
Tumor
0.2
535
Tumor
0.2
141
Tumor
0.2
647
Tumor
0.2
367
Tumor
0.2
635
Tumor
0.2
1015
Tumor
0.2
353
Tumor
0.2
343
Tumor
0.2
357
Tumor
0.2
953
Tumor
0.2
525
Tumor
0.2
873
Tumor
0.2
313
Tumor
0.2
467
Tumor
0.2
943
Tumor
0.2
815
Tumor
0.2
977
Tumor
0.2
537
Tumor
0.2
213
Tumor
0.2
445
Tumor
0.2
271
Tumor
0.2
125
Tumor
0.2
473
Tumor
0.2
443
Tumor
0.2
911
Tumor
0.2
355
Tumor
0.2
715
Tumor
0.2
341
Tumor
0.2
447
Tumor
0.2
881
Tumor
0.2
411
Tumor
0.1
161
Tumor
0.1
327
Tumor
0.1
1041
Tumor
0.1
191
Tumor
0.1
867
Tumor
0.1
433
Tumor
0.1
461
Tumor
0.1
913
Tumor
0.1
697
Tumor
0.1
663
Tumor
0.1
857
Tumor
0.1
491
Tumor
0.1
975
Tumor
0.1
481
Tumor
0.1
451
Tumor
0.1
297
Tumor
0.1
137
Tumor
0.1
187
Tumor
0.1
113
Tumor
0.1
435
Tumor
0.1
431
Tumor
0.1
493
Tumor
0.1
383
Tumor
0.1
483
Tumor
0.1
1031
Tumor
0.1
135
Tumor
0.1
477
Tumor
0.1
557
Tumor
0.1
1043
Tumor
0.1
217
Tumor
0.1
981
Tumor
0.1
665
Tumor
0.1
145
Tumor
0.1
311
Tumor
0.1
785
Tumor
0.1
365
Tumor
0.1
421
Tumor
0.1
391
Tumor
0.1
455
Tumor
0.1
423
Tumor
0.1
127
Tumor
0.1
354
Normal
0.0
465
Tumor
0.0
192
Normal
0.0
536
Normal
0.0
185
Tumor
0.0
221
Tumor
0.0
361
Tumor
0.0
394
Normal
0.0
721
Tumor
0.0
617
Tumor
0.0
755
Tumor
0.0
964
Normal
0.0
724
Normal
0.0
741
Tumor
0.0
817
Tumor
0.0
1014
Normal
0.0
358
Normal
0.0
883
Tumor
0.0
414
Normal
0.0
424
Normal
0.0
376
Normal
0.0
388
Normal
0.0
352
Normal
0.0
571
Tumor
0.0
223
Tumor
0.0
396
Normal
0.0
366
Normal
0.0
966
Normal
0.0
218
Normal
0.0
487
Tumor
0.0
823
Tumor
0.0
368
Normal
0.0
384
Normal
0.0
434
Normal
0.0
464
Normal
0.0
195
Tumor
0.0
641
Tumor
0.0
415
Tumor
0.0
456
Normal
0.0
298
Normal
0.0
627
Tumor
0.0
742
Normal
0.0
332
Normal
0.0
136
Normal
0.0
923
Tumor
0.0
664
Normal
0.0
666
Normal
0.0
428
Normal
0.0
452
Normal
0.0
344
Normal
0.0
955
Tumor
0.0
978
Normal
0.0
756
Normal
0.0
261
Tumor
0.0
471
Tumor
0.0
926
Normal
0.0
196
Normal
0.0
342
Normal
0.0
554
Normal
0.0
492
Normal
0.0
432
Normal
0.0
426
Normal
0.0
114
Normal
0.0
314
Normal
0.0
662
Normal
0.0
222
Normal
0.0
744
Normal
0.0
824
Normal
0.0
528
Normal
0.0
524
Normal
0.0
858
Normal
0.0
446
Normal
0.0
1016
Normal
0.0
392
Normal
0.0
513
Tumor
0.0
386
Normal
0.0
436
Normal
0.0
861
Tumor
0.0
478
Normal
0.0
628
Normal
0.0
444
Normal
0.0
915
Tumor
0.0
976
Normal
0.0
126
Normal
0.0
111
Normal
0.0
963
Tumor
0.0
362
Normal
0.0
912
Normal
0.0
232
Normal
-0.1
786
Normal
-0.1
723
Tumor
-0.1
146
Normal
-0.1
212
Normal
-0.1
132
Normal
-0.1
648
Normal
-0.1
553
Tumor
-0.1
484
Normal
-0.1
1046
Normal
-0.1
312
Normal
-0.1
738
Normal
-0.1
1026
Normal
-0.1
618
Normal
-0.1
534
Normal
-0.1
468
Normal
-0.1
1044
Normal
-0.1
448
Normal
-0.1
268
Normal
-0.1
258
Normal
-0.1
498
Normal
-0.1
138
Normal
-0.1
482
Normal
-0.1
952
Normal
-0.1
984
Normal
-0.1
716
Normal
-0.1
778
Normal
-0.1
916
Normal
-0.1
412
Normal
-0.1
422
Normal
-0.1
686
Normal
-0.1
272
Normal
-0.1
672
Normal
-0.1
563
Tumor
-0.1
728
Normal
-0.1
696
Normal
-0.1
1045
Tumor
-0.1
363
Tumor
-0.1
818
Normal
-0.1
142
Normal
-0.1
356
Normal
-0.1
128
Normal
-0.1
278
Normal
-0.1
636
Normal
-0.1
172
Normal
-0.1
1028
Normal
-0.1
466
Normal
-0.1
958
Normal
-0.1
518
Normal
-0.1
642
Normal
-0.1
124
Normal
-0.1
526
Normal
-0.1
944
Normal
-0.1
722
Normal
-0.1
186
Normal
-0.1
884
Normal
-0.1
864
Normal
-0.1
214
Normal
-0.1
954
Normal
-0.1
852
Normal
-0.1
546
Normal
-0.1
472
Normal
-0.1
148
Normal
-0.1
862
Normal
-0.1
1042
Normal
-0.1
816
Normal
-0.1
538
Normal
-0.1
982
Normal
-0.1
746
Normal
-0.1
514
Normal
-0.1
878
Normal
-0.1
968
Normal
-0.1
162
Normal
-0.1
568
Normal
-0.1
188
Normal
-0.1
262
Normal
-0.1
956
Normal
-0.1
364
Normal
-0.1
866
Normal
-0.1
1032
Normal
-0.1
714
Normal
-0.1
462
Normal
-0.1
924
Normal
-0.1
938
Normal
-0.1
874
Normal
-0.1
615
Tumor
-0.1
416
Normal
-0.1
695
Tumor
-0.1
1022
Normal
-0.1
284
Normal
-0.1
328
Normal
-0.1
474
Normal
-0.1
516
Normal
-0.1
616
Normal
-0.1
488
Normal
-0.1
224
Normal
-0.1
558
Normal
-0.1
698
Normal
-0.1
918
Normal
-0.1
286
Normal
-0.1
227
Tumor
-0.1
494
Normal
-0.1
882
Normal
-0.1
914
Normal
-0.1
228
Normal
-0.1
564
Normal
-0.2
922
Normal
-0.2
574
Normal
-0.2
572
Normal
-0.2
925
Tumor
-0.2
868
Normal
-0.2
685
Tumor
-0.2
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
