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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KLHDC3 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
68.4
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
186.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
175.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
171.1
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
165.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
165.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
163.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
163.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
162.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
161.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
154.3
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
153.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
147.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
147.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
146.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
134.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
131.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
128.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
124.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
122.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
121.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
120.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
118.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
117.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
117.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
115.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
115.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
115.2
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
114.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
113.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
113.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
112.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
110.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
108.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
107.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
107.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
107.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
106.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
106.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
106.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
106.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
105.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
104.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
104.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
103.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
103.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
103.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
101.6
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
101.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
101.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
101.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
101.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
100.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
99.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
99.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
99.3
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
99.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
97.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
97.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
96.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
96.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
95.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
95.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
95.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
95.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
94.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
94.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
94.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
94.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
92.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
92.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
92.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
92.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
91.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
91.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
91.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
90.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
89.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
89.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
89.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
89.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
88.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
88.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
86.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
86.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
86.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
86.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
85.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
84.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
84.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
84.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
84.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
84.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
83.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
83.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
82.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
82.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
81.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
81.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
81.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
81.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
81.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
80.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
80.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
80.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
80.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
79.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
79.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
78.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
78.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
78.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
78.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
78.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
77.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
77.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
77.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
76.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
76.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
76.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
76.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
76.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
75.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
75.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
75.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
75.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
75.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
75.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
74.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
74.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
74.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
74.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
73.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
73.5
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
73.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
72.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
72.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
72.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
72.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
72.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
72.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
72.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
71.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
71.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
71.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
71.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
70.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
70.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
70.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
70.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
69.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
69.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
69.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
68.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
68.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
67.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
67.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
67.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
67.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
67.4
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
67.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
67.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
67.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
66.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
66.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
66.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
65.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
65.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
65.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
64.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
64.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
64.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
63.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
63.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
63.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
63.0
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
62.9
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
62.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
62.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
61.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
61.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
61.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
61.4
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
61.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
61.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
61.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
61.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
61.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
60.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
60.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
59.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
59.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
59.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
59.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
59.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
59.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
59.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
59.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
58.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
58.7
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
58.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
58.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
58.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
58.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
57.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
57.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
57.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
57.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
57.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
57.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
56.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
56.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
56.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
56.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
56.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
56.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
56.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
55.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
55.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
55.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
55.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
54.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
54.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
54.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
54.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
54.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
54.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
53.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
53.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
53.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
53.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
53.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
52.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
52.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
52.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
52.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
52.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
52.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
52.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
52.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
52.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
51.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
51.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
51.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
50.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
50.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
50.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
50.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
49.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
49.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
49.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
49.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
49.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
48.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
48.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
48.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
48.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
48.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
47.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
47.7
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
47.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
47.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
47.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
46.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
46.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
45.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
45.7
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
45.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
45.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
45.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
45.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
45.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
45.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
45.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
45.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
45.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
45.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
44.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
44.8
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
44.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
44.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
44.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
44.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
44.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
44.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
44.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
43.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
43.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
43.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
43.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
43.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
43.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
42.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
42.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
42.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
42.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
41.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
41.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
41.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
41.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
41.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
41.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
41.4
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
41.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
40.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
40.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
40.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
40.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
40.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
39.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
39.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
39.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
39.0
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
38.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
38.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
38.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
38.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
38.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
38.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
37.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
37.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
37.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
37.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
37.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
37.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
37.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
36.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
36.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
36.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
36.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
36.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
35.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
35.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
35.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
35.2
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
35.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
34.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
33.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
33.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
33.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
33.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
33.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
32.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
31.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
31.5
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
31.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
31.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
31.1
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
29.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
29.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
29.5
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
28.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
28.8
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
28.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
28.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
26.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
26.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
26.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
24.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
24.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
23.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
22.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
22.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
KLHDC3 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
55.1
Number of samples
231
Samples
Sample
Description
TPM
DO45185
0 years, male, NA, stage:2, alive, 600 days
227.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
220.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
168.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
140.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
138.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
138.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
137.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
137.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
136.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
133.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
132.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
127.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
126.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
125.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
123.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
113.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
107.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
107.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
105.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
105.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
104.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
102.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
101.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
99.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
98.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
97.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
97.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
92.5
DO48737
0 years, male, NA, stage:1, alive, 720 days
89.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
88.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
87.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
84.0
DO45217
0 years, female, NA, stage:3, dead, 270 days
80.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
79.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
79.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
78.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
77.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
76.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
76.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
75.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
74.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
74.2
DO45187
0 years, female, NA, stage:1, alive, 1260 days
71.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
71.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
71.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
70.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
69.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
69.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
69.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
69.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
69.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
68.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
68.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
67.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
67.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
67.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
66.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
66.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
65.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
62.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
61.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
61.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
60.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
60.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
60.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
59.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
59.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
58.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
58.1
DO23545
0 years, male, NA, stage:2, dead, 570 days
58.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
57.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
57.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
57.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
57.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
56.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
56.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
56.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
55.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
55.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
55.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
55.5
DO45225
0 years, male, NA, stage:1, alive, 1050 days
54.9
DO45133
0 years, male, NA, stage:3, dead, 660 days
54.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
54.2
DO45183
0 years, female, NA, stage:2, dead, 570 days
53.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
53.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
53.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
53.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
53.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
53.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
52.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
52.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
52.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
52.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
51.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
51.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
51.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
50.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
50.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
50.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
50.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
50.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
49.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
48.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
48.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
48.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
48.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
48.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
48.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
47.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
47.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
47.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
46.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
46.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
46.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
45.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
45.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
45.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
45.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
44.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
44.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
44.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
44.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
44.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
43.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
43.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
43.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
43.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
43.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
43.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
42.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
42.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
42.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
41.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
41.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
41.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
40.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
40.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
40.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
40.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
40.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
39.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
39.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
39.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
39.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
39.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
39.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
39.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
39.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
39.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
39.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
38.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
38.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
38.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
38.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
38.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
37.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
37.4
DO45096
0 years, male, NA, stage:2, dead, 1290 days
37.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
36.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
36.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
36.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
36.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
36.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
36.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
36.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
36.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
36.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
35.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
35.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
35.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
35.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
35.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
35.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
34.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
33.9
DO45287
0 years, male, NA, stage:1, alive, 390 days
33.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
33.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
33.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
33.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
32.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
32.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
32.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
32.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
32.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
31.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
31.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
31.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
31.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
31.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
31.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
31.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
31.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
31.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
30.9
DO23523
0 years, male, NA, stage:3, alive, 1080 days
30.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
30.2
DO45285
0 years, male, NA, stage:3, alive, 480 days
29.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
29.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
29.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
28.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
28.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
28.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
28.2
DO23543
0 years, male, NA, stage:2, alive, 1020 days
28.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
28.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
28.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
27.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
27.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
27.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
27.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
26.5
DO45123
0 years, female, NA, stage:2, dead, 570 days
26.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
25.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
25.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
24.7
DO50857
0 years, male, NA, stage:2, alive, 210 days
23.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
23.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
22.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
22.3
DO50803
0 years, female, NA, stage:1, alive, 540 days
21.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
21.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
20.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
19.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
18.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
17.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
17.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
17.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
17.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
15.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
12.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
311
Tumor
1.6
815
Tumor
0.8
517
Tumor
0.7
818
Normal
0.7
498
Normal
0.6
722
Normal
0.6
858
Normal
0.5
488
Normal
0.5
956
Normal
0.5
863
Tumor
0.4
535
Tumor
0.4
526
Normal
0.4
851
Tumor
0.4
716
Normal
0.4
514
Normal
0.4
823
Tumor
0.4
816
Normal
0.4
686
Normal
0.4
484
Normal
0.4
332
Normal
0.3
112
Tumor
0.3
494
Normal
0.3
695
Tumor
0.3
714
Normal
0.3
516
Normal
0.3
127
Tumor
0.3
524
Normal
0.3
824
Normal
0.3
696
Normal
0.3
312
Normal
0.2
487
Tumor
0.2
852
Normal
0.2
298
Normal
0.2
314
Normal
0.2
857
Tumor
0.2
954
Normal
0.2
534
Normal
0.2
546
Normal
0.1
492
Normal
0.1
817
Tumor
0.1
528
Normal
0.1
491
Tumor
0.1
874
Normal
0.1
868
Normal
0.1
518
Normal
0.1
113
Tumor
0.1
123
Tumor
0.1
698
Normal
0.1
553
Tumor
0.1
278
Normal
0.0
538
Normal
0.0
1045
Tumor
0.0
864
Normal
0.0
111
Normal
0.0
513
Tumor
0.0
715
Tumor
0.0
448
Normal
0.0
1046
Normal
0.0
1044
Normal
0.0
697
Tumor
0.0
128
Normal
0.0
866
Normal
0.0
873
Tumor
0.0
313
Tumor
0.0
554
Normal
0.0
867
Tumor
0.0
497
Tumor
0.0
862
Normal
0.0
951
Tumor
0.0
721
Tumor
-0.1
536
Normal
-0.1
515
Tumor
-0.1
938
Normal
-0.1
865
Tumor
-0.1
944
Normal
-0.1
861
Tumor
-0.1
447
Tumor
-0.1
1043
Tumor
-0.1
126
Normal
-0.1
483
Tumor
-0.1
124
Normal
-0.1
685
Tumor
-0.1
953
Tumor
-0.1
114
Normal
-0.2
713
Tumor
-0.2
331
Tumor
-0.2
937
Tumor
-0.2
493
Tumor
-0.2
545
Tumor
-0.2
525
Tumor
-0.2
533
Tumor
-0.3
537
Tumor
-0.3
952
Normal
-0.3
277
Tumor
-0.4
527
Tumor
-0.4
125
Tumor
-0.4
955
Tumor
-0.5
523
Tumor
-0.5
297
Tumor
-0.5
943
Tumor
-0.6
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
354
Normal
N/A
355
Tumor
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
363
Tumor
N/A
364
Normal
N/A
365
Tumor
N/A
366
Normal
N/A
367
Tumor
N/A
368
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
131
Tumor
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
135
Tumor
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
1016
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
1013
Tumor
N/A
957
Tumor
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
963
Tumor
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
983
Tumor
N/A
742
Normal
N/A
984
Normal
N/A
743
Tumor
N/A
744
Normal
N/A
745
Tumor
N/A
746
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
755
Tumor
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
647
Tumor
N/A
648
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
413
Tumor
N/A
414
Normal
N/A
777
Tumor
N/A
415
Tumor
N/A
778
Normal
N/A
416
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
666
Normal
N/A
425
Tumor
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
432
Normal
N/A
433
Tumor
N/A
434
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
444
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
574
Normal
N/A
212
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
