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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLPI is potential prognostic, high expression is unfavorable in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1939.4
Number of samples
349
Samples
Sample
Description
TPM
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
26071.0
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
15406.5
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
14298.6
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
11402.0
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
8661.2
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
8235.2
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
7585.5
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
7529.4
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
7474.7
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
7066.3
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
6988.6
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
6152.8
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
6118.7
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
5943.1
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
5903.0
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
5690.1
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
5585.3
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
5431.2
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
5278.3
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
5275.0
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
5040.7
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
4998.7
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
4963.0
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
4944.2
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
4785.1
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
4771.1
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
4672.0
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
4670.0
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
4641.9
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
4624.5
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
4551.5
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
4412.7
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
4322.3
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
4315.7
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
4228.8
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
4213.0
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
3903.2
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
3891.3
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
3854.8
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
3787.2
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
3768.9
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
3767.4
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
3764.8
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
3750.8
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
3745.0
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
3735.5
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
3684.7
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
3652.2
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
3637.9
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
3599.9
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
3520.7
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
3440.3
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
3386.4
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
3351.7
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
3237.8
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
3234.8
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
3233.9
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
3217.5
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
3185.6
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
3117.9
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
3107.8
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
3077.1
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
3062.5
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
3026.5
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
3026.5
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
3001.3
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
2957.8
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
2939.4
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
2901.0
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
2899.5
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
2850.0
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
2849.3
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
2844.0
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
2779.6
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
2778.3
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
2771.5
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
2752.0
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
2694.4
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
2638.5
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
2621.5
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
2616.6
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
2614.5
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
2610.1
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
2600.6
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
2587.0
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
2498.1
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
2464.8
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
2452.8
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
2439.4
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
2419.7
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
2391.6
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
2385.4
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
2273.1
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
2268.2
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
2242.6
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
2240.0
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
2200.5
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
2194.7
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
2181.1
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
2113.0
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
2109.1
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
2083.4
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
2073.8
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
2057.0
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
2026.2
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
2024.7
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
2006.9
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
2005.1
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
1997.1
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1979.7
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
1972.7
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
1967.6
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
1965.5
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
1929.8
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
1927.9
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
1890.8
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
1884.7
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
1879.2
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
1873.2
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
1865.3
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
1848.9
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
1836.4
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
1829.4
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
1829.4
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
1802.6
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
1787.1
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
1758.0
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
1704.3
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
1646.3
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
1643.3
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
1639.5
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
1601.4
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
1587.5
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
1586.1
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
1575.8
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
1558.7
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
1546.2
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
1534.1
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
1532.2
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
1528.2
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
1517.4
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
1512.1
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
1502.5
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
1500.3
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
1498.6
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
1497.3
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
1495.0
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1489.5
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
1481.5
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
1478.3
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
1472.2
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
1472.1
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1469.0
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
1468.2
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
1458.9
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
1454.8
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
1449.6
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
1442.3
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
1437.6
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
1416.1
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
1409.6
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
1407.3
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
1402.8
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
1385.3
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
1383.1
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
1371.5
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
1351.7
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
1339.5
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
1331.8
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
1321.0
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
1301.1
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
1294.7
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
1281.5
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
1273.0
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
1268.1
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
1242.1
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
1232.5
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
1223.6
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
1222.7
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
1215.4
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
1204.6
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
1204.5
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
1204.0
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
1202.6
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
1199.0
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
1198.1
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
1172.8
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
1165.3
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
1163.6
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
1158.0
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
1155.8
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
1144.4
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
1140.3
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
1131.4
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
1126.3
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
1111.2
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
1104.7
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
1104.0
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
1082.3
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
1078.5
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
1071.9
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
1065.9
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
1048.2
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
1046.0
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
1042.8
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
1039.5
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
1036.9
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
1032.8
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
1030.2
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
1029.8
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1019.2
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
1014.9
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
1007.4
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
998.8
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
990.1
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
982.8
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
980.2
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
975.4
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
972.2
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
962.6
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
961.1
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
960.5
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
959.8
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
959.3
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
949.2
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
945.4
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
943.0
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
917.6
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
914.3
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
914.2
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
912.4
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
904.8
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
889.4
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
882.5
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
874.7
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
870.3
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
869.8
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
868.6
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
862.2
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
851.0
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
850.6
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
840.9
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
823.2
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
816.1
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
810.5
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
800.7
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
798.3
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
794.9
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
787.6
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
771.1
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
769.9
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
764.6
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
757.2
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
738.5
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
707.4
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
704.4
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
698.8
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
693.8
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
692.4
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
688.5
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
669.8
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
656.2
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
651.5
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
648.2
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
645.5
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
641.5
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
641.4
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
641.1
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
640.2
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
636.5
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
634.5
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
622.6
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
621.3
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
613.4
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
611.3
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
609.3
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
599.0
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
597.4
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
596.0
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
590.7
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
588.2
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
580.9
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
578.4
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
577.2
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
560.8
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
557.6
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
548.8
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
542.5
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
515.1
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
512.8
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
505.5
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
502.3
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
488.7
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
486.3
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
472.1
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
468.0
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
467.7
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
465.5
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
461.0
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
460.2
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
455.6
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
445.3
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
444.6
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
444.1
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
442.5
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
431.9
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
428.7
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
428.0
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
426.9
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
426.5
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
392.9
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
386.1
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
384.7
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
363.2
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
354.1
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
343.2
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
289.8
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
261.5
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
241.7
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
239.5
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
236.0
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
229.8
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
227.8
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
225.7
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
216.3
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
215.6
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
195.7
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
191.5
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
173.8
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
166.5
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
158.4
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
140.2
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
137.9
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
120.2
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
120.0
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
114.6
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
113.4
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
103.5
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
99.4
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
73.9
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
73.1
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
64.7
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
64.4
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
57.3
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
48.4
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
27.6
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
27.0
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
15.7
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLPI is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1958.4
Number of samples
81
Samples
Sample
Description
TPM
DO46350
0 years, female, NA, stage:III, dead, 886 days
12240.9
DO46390
0 years, female, NA, stage:III, dead, 374 days
6985.8
DO46376
0 years, female, NA, stage:III, dead, 1430 days
6514.6
DO46591
0 years, female, NA, stage:III, dead, 195 days
5953.6
DO46382
0 years, female, NA, stage:IV, dead, 311 days
5829.8
DO46566
0 years, female, NA, stage:III, dead, 673 days
5338.3
DO46354
0 years, female, NA, stage:III, dead, 843 days
4871.0
DO46404
0 years, female, NA, stage:III, dead, 690 days
4416.4
DO46576
0 years, female, NA, stage:III, alive, 133 days
3834.8
DO46561
0 years, female, NA, stage:III, dead, 195 days
3549.3
DO46340
0 years, female, NA, stage:III, dead, 616 days
3177.0
DO46374
0 years, female, NA, stage:III, dead, 1409 days
3052.2
DO46597
0 years, female, NA, stage:III, dead, 393 days
2902.7
DO46331
0 years, female, NA, stage:III, dead, 612 days
2885.7
DO46538
0 years, female, NA, stage:III, dead, 1527 days
2788.0
DO46611
0 years, female, NA, stage:III, dead, 734 days
2781.4
DO46606
0 years, female, NA, stage:III, alive, 804 days
2723.3
DO46388
0 years, female, NA, stage:III, dead, 413 days
2553.0
DO46364
0 years, female, NA, stage:III, dead, 806 days
2418.2
DO46400
0 years, female, NA, stage:III, dead, 719 days
2345.1
DO46533
0 years, female, NA, stage:III, alive, 3667 days
2328.0
DO46327
0 years, female, NA, stage:III, dead, 184 days
2304.4
DO46368
0 years, female, NA, stage:III, dead, 2879 days
2285.5
DO46366
0 years, female, NA, stage:III, dead, 2054 days
2242.8
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
2209.3
DO46581
0 years, female, NA, stage:III, dead, 408 days
2163.8
DO46396
0 years, female, NA, stage:III, dead, 583 days
2151.8
DO46325
0 years, female, NA, stage:III, dead, 477 days
2078.9
DO46448
0 years, female, NA, stage:III, dead, 654 days
1939.5
DO46346
0 years, female, NA, stage:III, dead, 1187 days
1935.8
DO46356
0 years, female, NA, stage:III, dead, 911 days
1880.7
DO46326
0 years, female, NA, stage:III, dead, 701 days
1835.6
DO46334
0 years, female, NA, stage:III, dead, 496 days
1796.1
DO46568
0 years, female, NA, stage:III, dead, 320 days
1793.3
DO46493
0 years, female, NA, stage:IV, alive, 839 days
1706.5
DO46436
0 years, female, NA, stage:III, alive, 3193 days
1609.1
DO46342
0 years, female, NA, stage:III, dead, 1398 days
1602.7
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
1588.1
DO46386
0 years, female, NA, stage:III, dead, 1162 days
1577.5
DO46348
0 years, female, NA, stage:IV, dead, 287 days
1573.1
DO46329
0 years, female, NA, stage:III, dead, 1699 days
1543.8
DO46398
0 years, female, NA, stage:III, alive, 437 days
1532.0
DO46344
0 years, female, NA, stage:III, dead, 642 days
1478.5
DO46463
0 years, female, NA, stage:III, dead, 2451 days
1431.3
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
1406.7
DO46408
0 years, female, NA, stage:III, dead, 489 days
1374.3
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
1273.9
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
1261.0
DO46378
0 years, female, NA, stage:III, alive, 843 days
1244.2
DO46333
0 years, female, NA, stage:III, dead, 359 days
1220.6
DO46370
0 years, female, NA, stage:III, dead, 1727 days
1211.2
DO46358
0 years, female, NA, stage:III, dead, 423 days
1130.5
DO46551
0 years, female, NA, stage:III, dead, 1055 days
1096.1
DO46443
0 years, female, NA, stage:III, dead, 2464 days
1023.7
DO46402
0 years, female, NA, stage:III, dead, 511 days
1017.6
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
864.4
DO46432
0 years, female, NA, stage:III, alive, 2218 days
833.0
DO46528
0 years, female, NA, stage:III, alive, 6139 days
828.7
DO46560
0 years, female, NA, stage:IV, dead, 286 days
814.3
DO46468
0 years, female, NA, stage:III, alive, 2776 days
780.4
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
753.4
DO46330
0 years, female, NA, stage:III, dead, 684 days
751.9
DO46602
0 years, female, NA, stage:III, dead, 205 days
732.4
DO46571
0 years, female, NA, stage:III, dead, 243 days
709.9
DO46508
0 years, female, NA, stage:III, dead, 2101 days
694.5
DO46380
0 years, female, NA, stage:III, dead, 1423 days
656.8
DO46412
0 years, female, NA, stage:III, dead, 597 days
645.5
DO46338
0 years, female, NA, stage:III, dead, 596 days
594.5
DO46546
0 years, female, NA, stage:III, dead, 1889 days
574.0
DO46372
0 years, female, NA, stage:III, dead, 1326 days
541.0
DO46336
0 years, female, NA, stage:IV, dead, 664 days
536.9
DO46352
0 years, female, NA, stage:III, dead, 677 days
464.4
DO46332
0 years, female, NA, stage:III, dead, 689 days
422.5
DO46362
0 years, female, NA, stage:III, dead, 1639 days
388.8
DO46328
0 years, female, NA, stage:III, dead, 972 days
242.1
DO46384
0 years, female, NA, stage:III, dead, 614 days
234.8
DO46586
0 years, female, NA, stage:III, dead, 1019 days
193.2
DO46392
0 years, female, NA, stage:III, dead, 628 days
170.1
DO46453
0 years, female, NA, stage:III, dead, 3294 days
96.7
DO46518
0 years, female, NA, stage:III, alive, 2960 days
73.5
DO46588
0 years, female, NA, stage:III, dead, 438 days
25.2
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
6.4
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
4.9
2f901c90-617e-46da-9fac-d68369_D2
Tumor
3.1
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
2.7
161317f3-1a39-438e-af45-cd2502_D2
Tumor
2.3
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
2.2
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
2.0
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
1.9
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
1.8
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
1.2
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
1.2
285fed94-1495-448e-879b-b55de9_D2
Tumor
1.1
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
1.1
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
1.0
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
1.0
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
1.0
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.9
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
0.8
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.7
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.7
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
0.7
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
0.7
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.7
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
0.6
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.6
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.5
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
0.5
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
0.5
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.4
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.4
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.4
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
0.4
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.4
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
0.3
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.3
a3a26070-fb84-406a-8280-d555e6_D2
Normal
0.2
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.2
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.2
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.2
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.2
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.1
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
0.1
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
0.1
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
0.0
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
0.0
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
0.0
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.0
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
0.0
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
-0.1
15524912-685a-47ce-a824-567848_D2
Tumor
-0.1
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.1
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-0.1
a65d8e76-640f-4341-a561-afbb57_D2
Normal
-0.2
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
-0.2
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
-0.3
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-0.3
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
-0.4
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-0.4
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
-0.5
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
-0.6
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
-0.6
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
-0.6
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-0.6
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.6
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-0.6
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.8
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.8
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.8
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-0.8
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-0.9
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
-0.9
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-1.0
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-1.0
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-1.0
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-1.0
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
-1.0
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
-1.1
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-1.1
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-1.1
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-1.1
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
-1.1
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-1.2
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
-1.2
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
-1.2
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-1.2
e9d416e7-f661-400a-896e-388545_D2
Tumor
-1.2
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
-1.3
340a3769-3031-41ae-bb08-a2f696_D2
Normal
-1.3
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-1.3
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
-1.3
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
-1.4
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-1.4
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
-1.5
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
-1.5
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-1.5
1772e913-f62e-446a-8cf3-720348_D2
Tumor
-1.6
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
-1.6
21efd60f-6a31-4b98-9477-16a905_D2
Normal
-1.7
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
-1.7
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
-1.7
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
-1.7
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-1.8
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-1.9
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
-2.1
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-2.1
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-2.2
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-2.2
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-3.5
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.