HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:43.5 nTPM
HPA Brain:74.3 nTPM
GTEx:43.5 nTPM
FANTOM5:38.4 Scaled Tags Per Million
Pig:13.4 nTPM
Mouse:22.3 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035123
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 74.3
Sample id Sample description nTPM
Hippocampus
nTPM: 63.7
1898 Male, age 80, left hemisphere 73.5
2529 Female, age 94, left hemisphere 64.1
1911 Female, age 85, right hemisphere 63.6
1855 Male, age 76, left hemisphere 63.1
2148 Female, age 91, left hemisphere 60.2
2621 Female, age 67, right hemisphere 57.9
Dentate gyrus
nTPM: 66.1
2530 Female, age 94, left hemisphere 96.2
2010 Male, age 76, both hemispheres 82.3
2528 Male, age 74, both hemispheres 63.3
1927 Female, age 91, both hemispheres 59.6
2246 Female, age 85, both hemispheres 50.6
2531 Female, age 67, both hemispheres 44.5
Entorhinal gyrus
nTPM: 53.6
2117 Female, age 91, right hemisphere 69.4
2613 Female, age 94, left hemisphere 60.8
1787 Male, age 76, left hemisphere 55.2
1938 Female, age 85, left hemisphere 50.5
2764 Male, age 80, right hemisphere 49.2
2686 Male, age 75, right hemisphere 36.6
Hippocampus, CA1
nTPM: 74.3
2749 Male, age 80, left hemisphere 131.8
2527 Male, age 74, both hemispheres 69.8
1873 Female, age 85, both hemispheres 59.6
2045 Male, age 76, both hemispheres 56.7
2082 Female, age 91, right hemisphere 53.8
Hippocampus, CA2
nTPM: 65.3
2249 Male, age 74, both hemispheres 79.0
1963 Male, age 80, left hemisphere 76.5
2437 Female, age 94, left hemisphere 69.0
1892 Male, age 76, both hemispheres 62.1
2113 Female, age 91, right hemisphere 55.7
1940 Female, age 85, left hemisphere 49.6
Hippocampus, CA3
nTPM: 68.8
2137 Male, age 80, left hemisphere 114.2
2436 Male, age 74, both hemispheres 72.6
1867 Male, age 76, both hemispheres 64.8
2620 Female, age 94, left hemisphere 59.3
2861 Female, age 67, both hemispheres 57.8
1891 Female, age 85, both hemispheres 44.3
Parahippocampal cortex
nTPM: 48.9
2245 Female, age 91, both hemispheres 66.7
2018 Male, age 76, both hemispheres 58.9
2250 Female, age 67, right hemisphere 57.5
2622 Female, age 67, right hemisphere 53.4
1990 Female, age 91, right hemisphere 49.3
1933 Female, age 85, both hemispheres 46.5
2692 Male, age 74, both hemispheres 42.9
2532 Female, age 72, left hemisphere 38.7
2693 Female, age 94, both hemispheres 37.7
1850 Male, age 80, both hemispheres 37.6
Perirhinal gyrus
nTPM: 47.4
2521 Female, age 94, right hemisphere 68.6
1847 Female, age 91, left hemisphere 50.4
1794 Male, age 80, right hemisphere 48.6
1841 Female, age 85, right hemisphere 35.6
2848 Male, age 76, right hemisphere 33.9
Subiculum
nTPM: 55.8
1901 Male, age 80, both hemispheres 68.5
2042 Male, age 76, both hemispheres 60.7
2729 Female, age 91, right hemisphere 54.4
1977 Female, age 85, both hemispheres 54.1
2438 Female, age 94, left hemisphere 49.1
2619 Male, age 74, both hemispheres 47.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 43.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.5
Samples: 197

Max nTPM: 121.9
Min nTPM: 13.5
Std nTPM: 19.3
Median nTPM: 39.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 121.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 113.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 111.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 99.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 85.7
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 85.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 83.9
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 82.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 81.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 78.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 78.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 38.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.4
FF:10153-102I9 76 years, female 39.5
FF:10169-103B7 60 years, female 37.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 13.4
Pig sample Sample description nTPM
Subiculum
nTPM: 11.9
Samples: 4

Max nTPM: 13.2
Min nTPM: 10.6
Sample A Female 13.2
Sample B Female 11.3
Sample C Male 12.3
Sample D Male 10.6
Dorsal hippocampus
nTPM: 11.4
Samples: 4

Max nTPM: 13.8
Min nTPM: 8.9
Sample A Female 13.8
Sample B Female 12.5
Sample C Male 10.4
Sample D Male 8.9
Entorhinal cortex
nTPM: 13.4
Samples: 4

Max nTPM: 14.7
Min nTPM: 11.6
Sample A Female 14.4
Sample B Female 11.6
Sample C Male 14.7
Sample D Male 12.8
Ventral hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 15.4
Min nTPM: 9.6
Sample A Female 12.8
Sample B Female 9.6
Sample C Male 15.4
Sample D Male 12.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 22.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.8
Samples: 4

Max nTPM: 20.3
Min nTPM: 14.7
Sample A Male 17.7
Sample B Male 18.3
Sample C Female 14.7
Sample D Female 20.3
Hippocampal formation
nTPM: 22.3
Samples: 4

Max nTPM: 24.6
Min nTPM: 17.6
Sample A Male 17.6
Sample B Male 22.8
Sample C Female 24.6
Sample D Female 24.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
71580180 Antisense, RP_050915_04_D04, Mouse strain C57BL/6J (56 days, male) 0.3

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