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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
18.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
5.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
4.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
3.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
2.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
1.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
1.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TNFAIP6 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
51.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
404.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
343.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
327.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
323.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
288.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
273.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
253.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
248.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
239.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
238.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
236.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
222.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
207.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
204.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
201.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
188.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
183.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
179.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
172.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
171.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
170.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
166.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
161.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
161.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
156.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
153.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
152.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
150.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
143.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
143.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
142.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
141.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
140.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
139.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
139.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
138.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
138.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
138.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
137.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
134.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
133.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
132.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
130.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
129.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
129.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
128.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
128.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
126.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
125.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
124.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
122.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
119.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
119.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
118.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
117.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
116.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
116.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
115.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
115.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
115.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
114.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
113.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
113.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
113.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
113.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
112.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
110.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
109.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
109.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
106.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
105.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
105.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
105.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
104.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
104.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
103.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
103.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
103.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
101.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
100.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
100.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
100.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
100.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
98.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
97.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
97.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
96.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
96.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
96.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
96.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
96.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
95.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
95.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
95.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
94.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
93.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
91.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
90.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
90.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
89.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
89.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
89.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
88.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
88.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
87.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
87.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
86.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
86.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
86.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
86.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
85.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
84.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
83.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
83.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
82.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
82.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
81.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
81.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
81.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
80.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
80.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
80.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
79.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
78.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
78.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
78.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
78.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
77.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
75.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
74.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
74.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
73.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
72.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
72.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
71.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
71.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
71.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
70.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
70.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
69.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
68.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
68.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
67.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
67.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
67.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
66.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
65.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
65.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
65.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
64.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
63.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
63.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
62.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
62.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
62.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
61.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
61.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
61.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
61.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
60.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
60.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
59.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
58.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
58.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
58.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
58.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
58.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
58.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
58.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
58.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
57.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
57.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
57.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
57.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
57.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
57.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
57.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
56.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
56.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
55.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
55.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
55.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
54.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
54.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
53.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
53.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
53.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
53.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
52.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
52.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
52.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
51.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
50.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
50.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
50.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
49.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
49.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
49.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
48.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
48.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
48.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
48.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
47.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
47.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
47.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
46.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
46.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
46.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
46.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
46.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
46.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
45.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
45.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
44.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
44.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
44.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
43.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
43.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
43.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
42.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
42.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
42.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
42.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
41.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
41.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
41.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
41.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
41.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
41.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
40.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
40.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
40.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
40.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
40.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
40.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
40.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
40.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
39.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
39.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
39.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
39.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
39.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
39.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
38.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
38.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
38.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
38.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
37.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
37.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
37.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
37.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
37.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
36.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
36.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
36.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
36.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
35.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
35.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
35.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
35.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
35.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
35.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
35.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
34.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
34.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
34.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
34.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
34.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
34.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
34.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
33.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
33.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
32.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
31.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
31.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
31.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
31.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
31.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
30.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
30.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
30.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
29.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
29.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
29.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
29.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
29.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
29.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
29.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
28.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
28.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
28.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
28.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
28.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
27.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
27.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
27.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
26.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
26.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
26.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
26.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
26.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
26.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
26.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
26.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
26.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
26.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
25.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
25.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
24.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
24.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
24.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
24.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
24.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
23.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
23.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
23.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
23.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
23.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
22.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
22.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
22.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
22.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
22.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
21.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
21.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
20.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
20.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
20.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
20.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
20.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
20.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
19.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
19.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
19.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
19.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
19.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
19.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
19.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
19.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
18.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
18.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
18.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
18.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
18.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
17.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
16.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
16.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
16.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
16.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
16.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
16.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
16.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
16.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
16.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
15.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
15.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
15.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
15.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
15.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
15.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
14.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
14.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
14.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
13.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
13.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
13.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
13.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
13.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
13.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
12.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
12.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
12.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
12.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
12.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
12.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
12.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
11.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
11.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
11.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
10.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
10.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
10.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
10.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
10.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
10.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
10.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
9.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
9.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
9.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
8.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
8.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
8.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
8.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
8.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
8.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
8.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
8.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
8.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
8.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
7.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
7.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
7.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
7.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
6.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
6.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
6.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
6.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
6.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
6.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
5.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
5.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
5.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
5.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
5.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
4.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
4.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
4.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
4.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
4.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
4.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
4.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
4.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
4.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
3.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
3.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
3.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
3.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
3.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
3.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
3.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
2.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
2.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
2.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
2.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
2.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
2.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
1.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
1.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
1.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
1.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
1.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
1.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
1.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
1.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
1.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
1.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
1.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
1.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
0.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
0.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
0.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
0.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
0.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
0.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
0.4
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
0.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
0.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
0.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
0.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
0.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
0.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TNFAIP6 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
69.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
319.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
269.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
247.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
191.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
188.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
179.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
171.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
166.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
165.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
156.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
155.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
152.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
152.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
151.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
146.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
137.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
135.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
134.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
128.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
124.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
111.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
110.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
107.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
104.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
99.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
98.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
96.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
93.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
93.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
93.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
81.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
81.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
80.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
77.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
74.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
73.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
73.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
72.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
71.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
65.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
64.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
61.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
60.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
60.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
59.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
58.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
58.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
58.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
57.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
53.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
52.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
48.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
48.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
45.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
44.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
42.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
40.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
38.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
38.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
37.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
36.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
36.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
36.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
35.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
31.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
30.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
30.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
29.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
29.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
26.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
25.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
25.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
25.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
24.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
22.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
19.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
19.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
18.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
16.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
16.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
13.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
12.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
11.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
11.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
10.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
7.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
7.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
4.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
2.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
2.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
2.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
1.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
0.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
0.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TNFAIP6 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
245.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
185.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
159.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
147.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
137.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
122.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
121.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
108.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
106.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
105.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
102.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
102.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
101.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
100.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
98.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
96.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
92.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
90.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
90.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
84.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
84.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
84.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
80.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
78.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
77.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
75.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
74.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
74.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
70.0
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
63.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
62.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
60.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
59.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
57.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
56.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
56.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
52.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
51.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
51.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
49.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
49.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
48.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
48.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
48.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
47.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
44.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
44.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
44.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
43.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
43.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
43.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
41.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
41.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
41.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
41.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
40.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
39.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
39.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
38.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
38.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
37.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
37.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
36.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
36.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
36.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
35.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
34.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
33.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
33.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
32.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
32.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
32.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
32.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
31.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
31.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
31.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
30.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
30.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
30.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
29.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
29.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
29.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
29.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
28.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
28.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
28.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
28.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
27.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
27.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
27.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
27.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
26.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
26.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
25.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
25.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
24.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
24.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
23.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
23.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
23.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
23.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
23.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
22.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
22.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
22.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
22.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
21.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
21.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
21.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
21.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
20.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
19.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
19.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
19.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
19.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
19.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
19.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
19.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
19.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
18.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
17.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
17.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
17.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
17.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
17.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
17.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
17.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
16.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
16.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
16.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
15.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
15.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
15.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
15.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
15.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
15.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
14.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
14.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
13.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
13.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
12.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
12.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
12.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
12.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
12.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
12.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
11.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
10.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
10.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
10.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
9.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
9.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
9.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
9.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
8.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
8.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
8.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
7.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
7.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
7.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
7.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
6.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
6.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
6.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
6.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
6.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
6.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
5.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
5.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
5.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
5.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
4.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
4.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
4.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
4.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
3.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
3.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
3.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
2.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
2.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
2.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
2.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
2.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
2.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
2.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
2.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
2.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
2.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
2.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
2.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
2.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
2.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
1.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
1.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
1.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
1.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
1.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
1.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
1.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
1.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
1.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
1.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
1.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
1.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
1.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
1.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
1.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
1.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
0.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
0.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
0.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
0.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
0.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
0.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
0.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
0.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
0.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
0.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
0.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
0.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
0.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
0.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
0.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
0.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
0.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
0.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
0.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
0.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
0.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
0.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
3.5
CPT0076330003
Tumor
3.0
CPT0015910003
Tumor
2.8
CPT0079230003
Tumor
2.0
CPT0063320003
Tumor
1.9
CPT0085670003
Tumor
1.9
CPT0012670003
Tumor
1.8
CPT0011240003
Tumor
1.8
CPT0088900003
Tumor
1.8
CPT0009060003
Tumor
1.7
CPT0065870003
Tumor
1.7
CPT0071150004
Tumor
1.6
CPT0081990003
Tumor
1.6
CPT0088630003
Tumor
1.3
CPT0000640003
Tumor
1.3
CPT0063630003
Tumor
1.3
CPT0075560003
Tumor
1.2
CPT0079410003
Tumor
1.1
CPT0025110003
Tumor
1.0
CPT0075720003
Tumor
1.0
CPT0007860003
Tumor
1.0
CPT0001220008
Tumor
0.9
CPT0077110003
Tumor
0.9
CPT0010160003
Tumor
0.9
CPT0081600003
Tumor
0.9
CPT0078830003
Tumor
0.9
CPT0077490003
Tumor
0.9
CPT0092290003
Tumor
0.8
CPT0000870016
Tumor
0.7
CPT0025880003
Tumor
0.7
CPT0025230003
Tumor
0.7
CPT0065930003
Tumor
0.6
CPT0089460004
Tumor
0.6
CPT0001260009
Tumor
0.6
CPT0025350003
Tumor
0.6
CPT0017850003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0077310003
Tumor
0.5
CPT0014370004
Tumor
0.5
CPT0012370003
Tumor
0.5
CPT0007320003
Tumor
0.5
CPT0017410003
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0010110003
Tumor
0.4
CPT0078670001
Normal
0.4
CPT0006630003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0088760003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0086030003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0020130001
Normal
0.3
CPT0015810003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0065690003
Tumor
0.2
CPT0009000003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0001510001
Normal
0.2
CPT0078660003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0086370003
Normal
0.1
CPT0023690003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0014450004
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0021240003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0025050003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0081880003
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0024680001
Normal
-0.3
CPT0025580004
Tumor
-0.3
CPT0092730003
Tumor
-0.4
CPT0078930003
Tumor
-0.4
CPT0007470001
Normal
-0.4
CPT0069160003
Tumor
-0.4
CPT0025060001
Normal
-0.4
CPT0084590001
Normal
-0.4
CPT0009020003
Normal
-0.4
CPT0078990003
Tumor
-0.5
CPT0089480003
Normal
-0.5
CPT0011410003
Tumor
-0.5
CPT0069010001
Normal
-0.5
CPT0012770003
Normal
-0.5
CPT0086360003
Tumor
-0.5
CPT0092310003
Normal
-0.5
CPT0092790003
Tumor
-0.5
CPT0079180003
Tumor
-0.5
CPT0009080003
Normal
-0.5
CPT0092740003
Normal
-0.6
CPT0076350001
Normal
-0.6
CPT0012180003
Tumor
-0.6
CPT0001500009
Tumor
-0.6
CPT0081620001
Normal
-0.6
CPT0087040003
Tumor
-0.6
CPT0013790003
Normal
-0.6
CPT0088640003
Normal
-0.7
CPT0019160001
Normal
-0.7
CPT0075570001
Normal
-0.7
CPT0001180009
Tumor
-0.7
CPT0014130001
Normal
-0.7
CPT0086830003
Normal
-0.7
CPT0012920003
Normal
-0.7
CPT0014350001
Normal
-0.7
CPT0010120001
Normal
-0.7
CPT0000890001
Normal
-0.8
CPT0006950001
Normal
-0.8
CPT0018250001
Normal
-0.8
CPT0025610001
Normal
-0.8
CPT0077500001
Normal
-0.8
CPT0088570001
Normal
-0.8
CPT0014470001
Normal
-0.8
CPT0077140001
Normal
-0.8
CPT0078940001
Normal
-0.8
CPT0086950003
Tumor
-0.9
CPT0012570003
Normal
-0.9
CPT0012090003
Normal
-0.9
CPT0023710001
Normal
-0.9
CPT0077320001
Normal
-0.9
CPT0006730001
Normal
-0.9
CPT0078840001
Normal
-0.9
CPT0017450001
Normal
-0.9
CPT0075130003
Tumor
-1.0
CPT0079300001
Normal
-1.0
CPT0079430001
Normal
-1.0
CPT0001230001
Normal
-1.0
CPT0079000001
Normal
-1.0
CPT0087050003
Normal
-1.0
CPT0078800003
Tumor
-1.0
CPT0088550004
Tumor
-1.0
CPT0086890003
Normal
-1.1
CPT0001190001
Normal
-1.1
CPT0063330001
Normal
-1.1
CPT0023360001
Normal
-1.1
CPT0000660001
Normal
-1.1
CPT0001270001
Normal
-1.1
CPT0012290003
Normal
-1.1
CPT0012640003
Normal
-1.2
CPT0088690003
Tumor
-1.3
CPT0007870001
Normal
-1.3
CPT0002270011
Tumor
-1.3
CPT0092190003
Normal
-1.3
CPT0082010001
Normal
-1.4
CPT0001340003
Tumor
-1.5
CPT0086970003
Normal
-1.5
CPT0069190001
Normal
-1.6
CPT0025920001
Normal
-1.7
CPT0010170001
Normal
-1.8
CPT0064400001
Normal
-1.9
CPT0088710001
Normal
-2.4
CPT0088780001
Normal
-2.4
CPT0002370001
Normal
-2.4
CPT0063640001
Normal
-2.4
CPT0026410003
Tumor
N/A
CPT0000790001
Normal
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0089040001
Normal
N/A
CPT0019990003
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0088500001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
