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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NMI is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
19.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
15.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
11.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
10.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
8.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
7.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
7.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
7.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
7.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
7.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
7.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
6.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
6.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
6.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
6.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
5.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
5.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
5.3
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
5.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
5.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
4.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
4.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
4.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
4.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
4.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
4.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
4.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
3.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
3.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
3.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
3.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
3.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
2.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
2.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
2.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
2.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
2.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
2.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
2.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
1.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NMI is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
108.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
107.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
67.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
66.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
61.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
55.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
54.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
54.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
54.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
53.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
53.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
53.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
52.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
51.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
51.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
51.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
51.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
50.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
50.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
50.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
49.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
48.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
48.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
48.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
47.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
47.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
47.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
46.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
46.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
45.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
45.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
45.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
45.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
45.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
45.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
44.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
44.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
44.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
43.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
43.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
43.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
43.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
42.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
42.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
42.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
42.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
42.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
42.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
42.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
42.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
42.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
42.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
42.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
41.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
41.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
41.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
41.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
41.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
41.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
41.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
40.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
40.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
40.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
40.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
39.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
39.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
39.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
39.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
39.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
39.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
39.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
39.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
38.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
38.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
38.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
38.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
38.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
38.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
37.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
37.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
37.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
37.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
37.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
37.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
37.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
37.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
37.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
37.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
37.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
37.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
37.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
37.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
36.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
36.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
36.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
36.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
36.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
36.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
36.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
36.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
36.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
36.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
36.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
36.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
36.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
36.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
35.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
35.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
35.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
35.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
35.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
35.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
35.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
35.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
35.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
35.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
35.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
35.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
34.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
34.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
34.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
34.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
34.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
34.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
34.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
34.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
34.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
34.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
34.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
34.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
34.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
34.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
34.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
34.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
34.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
34.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
33.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
33.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
33.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
33.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
33.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
33.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
33.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
33.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
33.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
33.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
33.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
33.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
33.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
32.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
32.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
32.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
32.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
32.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
32.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
32.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
32.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
32.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
32.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
32.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
32.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
32.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
32.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
32.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
31.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
31.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
31.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
31.7
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
31.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
31.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
31.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
31.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
31.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
31.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
31.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
31.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
31.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
31.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
31.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
31.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
31.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
31.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
31.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
31.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
31.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
30.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
30.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
30.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
30.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
30.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
30.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
30.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
30.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
30.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
30.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
30.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
30.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
30.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
30.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
30.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
30.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
30.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
30.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
30.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
30.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
30.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
30.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
30.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
30.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
30.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
30.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
30.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
29.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
29.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
29.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
29.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
29.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
29.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
29.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
29.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
29.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
29.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
29.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
29.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
29.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
29.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
29.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
29.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
29.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
29.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
29.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
29.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
29.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
29.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
29.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
28.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
28.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
28.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
28.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
28.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
28.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
28.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
28.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
28.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
28.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
28.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
28.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
28.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
28.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
28.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
28.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
28.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
28.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
28.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
28.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
28.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
28.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
28.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
27.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
27.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
27.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
27.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
27.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
27.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
27.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
27.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
27.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
27.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
27.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
27.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
27.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
27.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
27.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
27.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
27.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
27.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
27.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
27.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
27.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
27.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
27.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
27.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
27.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
27.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
27.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
27.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
26.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
26.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
26.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
26.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
26.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
26.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
26.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
26.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
26.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
26.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
26.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
26.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
26.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
26.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
26.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
26.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
25.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
25.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
25.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
25.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
25.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
25.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
25.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
25.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
25.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
25.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
25.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
25.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
25.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
25.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
25.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
25.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
25.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
25.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
25.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
24.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
24.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
24.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
24.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
24.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
24.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
24.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
24.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
24.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
24.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
24.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
24.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
24.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
24.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
24.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
24.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
24.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
24.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
24.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
24.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
24.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
24.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
23.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
23.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
23.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
23.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
23.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
23.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
23.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
23.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
23.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
23.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
23.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
23.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
23.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
23.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
23.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
23.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
23.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
23.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
23.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
22.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
22.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
22.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
22.7
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
22.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
22.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
22.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
22.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
22.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
22.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
22.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
22.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
22.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
22.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
22.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
22.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
22.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
22.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
22.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
22.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
22.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
22.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
22.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
22.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
22.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
21.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
21.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
21.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
21.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
21.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
21.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
21.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
21.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
21.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
21.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
21.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
21.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
21.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
21.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
20.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
20.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
20.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
20.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
20.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
20.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
20.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
20.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
20.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
20.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
20.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
20.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
19.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
19.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
19.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
19.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
19.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
19.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
19.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
19.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
19.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
19.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
19.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
19.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
18.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
18.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
18.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
18.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
18.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
18.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
18.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
17.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
17.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
17.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
17.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
17.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
17.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
17.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
17.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
17.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
17.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
16.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
16.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
16.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
16.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
16.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
16.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
16.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
16.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
16.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
15.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
15.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
15.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
15.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
15.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
15.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
15.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
14.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
14.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
14.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
14.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
13.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
12.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
12.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
11.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
10.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
10.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
10.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
10.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
9.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
9.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
8.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
8.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
8.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
8.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
5.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
4.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
4.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
4.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
4.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
3.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
2.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NMI is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
99.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
87.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
84.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
66.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
65.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
64.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
64.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
63.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
63.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
60.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
58.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
58.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
57.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
57.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
55.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
55.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
55.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
54.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
51.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
50.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
50.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
48.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
47.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
47.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
46.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
46.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
46.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
46.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
45.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
44.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
44.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
44.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
43.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
43.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
42.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
41.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
40.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
39.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
39.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
39.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
39.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
39.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
39.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
38.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
37.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
37.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
36.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
36.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
36.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
36.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
36.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
35.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
35.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
35.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
35.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
35.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
34.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
34.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
34.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
33.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
33.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
33.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
33.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
33.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
32.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
32.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
32.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
32.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
32.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
31.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
30.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
29.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
28.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
28.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
28.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
28.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
27.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
26.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
26.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
26.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
26.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
25.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
25.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
25.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
25.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
24.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
23.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
21.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
21.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
19.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
19.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
18.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
15.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
15.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
9.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NMI is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
54.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
53.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
47.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
46.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
44.9
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
44.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
44.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
42.5
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
41.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
39.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
38.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
38.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
37.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
36.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
36.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
36.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
35.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
35.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
35.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
35.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
35.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
35.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
33.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
33.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
33.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
32.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
32.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
32.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
32.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
32.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
32.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
31.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
31.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
31.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
31.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
31.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
30.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
30.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
30.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
30.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
29.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
29.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
28.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
27.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
27.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
27.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
27.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
27.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
27.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
27.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
27.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
26.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
26.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
26.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
26.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
26.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
26.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
25.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
25.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
25.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
25.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
25.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
25.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
25.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
25.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
25.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
25.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
25.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
25.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
25.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
25.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
24.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
24.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
24.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
24.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
24.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
24.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
24.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
24.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
24.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
24.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
24.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
23.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
23.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
23.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
23.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
23.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
23.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
23.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
23.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
23.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
23.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
23.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
23.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
23.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
23.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
23.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
23.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
23.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
23.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
22.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
22.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
22.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
22.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
22.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
22.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
22.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
22.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
22.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
22.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
22.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
21.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
21.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
21.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
21.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
21.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
21.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
21.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
21.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
20.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
20.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
20.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
20.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
20.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
20.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
19.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
19.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
19.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
19.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
19.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
19.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
18.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
18.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
18.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
18.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
18.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
18.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
18.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
18.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
18.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
18.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
18.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
18.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
18.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
18.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
17.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
17.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
17.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
17.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
17.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
17.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
17.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
17.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
16.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
16.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
16.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
16.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
16.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
16.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
16.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
16.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
16.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
16.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
16.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
15.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
15.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
15.7
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
15.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
15.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
15.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
15.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
15.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
15.2
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
15.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
15.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
14.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
14.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
14.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
14.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
14.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
14.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
14.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
14.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
14.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
13.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
13.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
13.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
13.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
13.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
13.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
13.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
13.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
13.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
13.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
12.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
12.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
12.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
12.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
12.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
12.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
12.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
12.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
12.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
12.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
12.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
12.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
12.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
11.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
11.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
11.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
11.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
11.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
11.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
10.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
10.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
9.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
9.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
9.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
9.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
9.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
9.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
9.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
8.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
8.8
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
8.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
8.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
8.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
7.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
7.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
6.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
6.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
6.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
6.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
6.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
6.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
6.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
5.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
5.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
5.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
3.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0081880003
Tumor
1.3
CPT0001180009
Tumor
1.3
CPT0025880003
Tumor
1.2
CPT0012670003
Tumor
1.1
CPT0025050003
Tumor
1.1
CPT0001260009
Tumor
1.0
CPT0012180003
Tumor
1.0
CPT0012550003
Tumor
1.0
CPT0076330003
Tumor
1.0
CPT0023350003
Tumor
1.0
CPT0001540009
Tumor
0.9
CPT0075130003
Tumor
0.9
CPT0088550004
Tumor
0.9
CPT0025230003
Tumor
0.8
CPT0079380003
Tumor
0.8
CPT0065430003
Tumor
0.8
CPT0078990003
Tumor
0.8
CPT0079410003
Tumor
0.8
CPT0017410003
Tumor
0.8
CPT0000640003
Tumor
0.8
CPT0010160003
Tumor
0.7
CPT0021240003
Tumor
0.7
CPT0017850003
Tumor
0.7
CPT0002350011
Tumor
0.7
CPT0071150004
Tumor
0.6
CPT0089460004
Tumor
0.6
CPT0024670003
Tumor
0.6
CPT0084560003
Tumor
0.6
CPT0026410003
Tumor
0.6
CPT0015730003
Tumor
0.6
CPT0006900003
Tumor
0.6
CPT0009000003
Tumor
0.6
CPT0010110003
Tumor
0.6
CPT0075560003
Tumor
0.6
CPT0014160003
Tumor
0.6
CPT0078510003
Tumor
0.6
CPT0086950003
Tumor
0.6
CPT0012280003
Tumor
0.6
CPT0009060003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0063630003
Tumor
0.5
CPT0025290003
Tumor
0.5
CPT0020120003
Tumor
0.5
CPT0001500009
Tumor
0.5
CPT0088690003
Tumor
0.5
CPT0001340003
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0089020003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0092160003
Tumor
0.4
CPT0023690003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0015910003
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0025110003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0014450004
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0007320003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0000780007
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0092190003
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0077490003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0077310003
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0011410003
Tumor
0.0
CPT0086870003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0066470004
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0017450001
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0078530001
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0010120001
Normal
-0.4
CPT0018250001
Normal
-0.4
CPT0001190001
Normal
-0.4
CPT0002270011
Tumor
-0.4
CPT0078660003
Tumor
-0.4
CPT0088570001
Normal
-0.4
CPT0012290003
Normal
-0.4
CPT0088970003
Tumor
-0.5
CPT0089040001
Normal
-0.5
CPT0012920003
Normal
-0.5
CPT0069190001
Normal
-0.5
CPT0066520001
Normal
-0.5
CPT0024680001
Normal
-0.5
CPT0012640003
Normal
-0.5
CPT0079430001
Normal
-0.5
CPT0006530001
Normal
-0.5
CPT0076350001
Normal
-0.5
CPT0063640001
Normal
-0.6
CPT0092740003
Normal
-0.6
CPT0001550001
Normal
-0.6
CPT0082010001
Normal
-0.6
CPT0009020003
Normal
-0.6
CPT0025060001
Normal
-0.6
CPT0065820001
Normal
-0.6
CPT0000660001
Normal
-0.6
CPT0063330001
Normal
-0.6
CPT0088920001
Normal
-0.6
CPT0000890001
Normal
-0.6
CPT0014350001
Normal
-0.6
CPT0014130001
Normal
-0.6
CPT0079180003
Tumor
-0.6
CPT0013790003
Normal
-0.6
CPT0086970003
Normal
-0.6
CPT0001350001
Normal
-0.6
CPT0081620001
Normal
-0.6
CPT0025610001
Normal
-0.6
CPT0079000001
Normal
-0.7
CPT0069010001
Normal
-0.7
CPT0012090003
Normal
-0.7
CPT0079300001
Normal
-0.7
CPT0002370001
Normal
-0.7
CPT0086890003
Normal
-0.7
CPT0023360001
Normal
-0.7
CPT0019160001
Normal
-0.7
CPT0023710001
Normal
-0.7
CPT0009080003
Normal
-0.7
CPT0092310003
Normal
-0.7
CPT0088640003
Normal
-0.7
CPT0078670001
Normal
-0.7
CPT0079510001
Normal
-0.7
CPT0078940001
Normal
-0.7
CPT0025920001
Normal
-0.7
CPT0088710001
Normal
-0.7
CPT0065450001
Normal
-0.7
CPT0001230001
Normal
-0.8
CPT0006730001
Normal
-0.8
CPT0020130001
Normal
-0.8
CPT0088500001
Normal
-0.8
CPT0010170001
Normal
-0.8
CPT0006950001
Normal
-0.8
CPT0078840001
Normal
-0.8
CPT0086830003
Normal
-0.8
CPT0026420001
Normal
-0.8
CPT0001510001
Normal
-0.8
CPT0089480003
Normal
-0.8
CPT0077500001
Normal
-0.8
CPT0077140001
Normal
-0.8
CPT0020020001
Normal
-0.8
CPT0007470001
Normal
-0.8
CPT0064400001
Normal
-0.8
CPT0087050003
Normal
-0.8
CPT0086370003
Normal
-0.8
CPT0000790001
Normal
-0.8
CPT0088780001
Normal
-0.9
CPT0012570003
Normal
-0.9
CPT0092800003
Normal
-0.9
CPT0007870001
Normal
-0.9
CPT0066430001
Normal
-0.9
CPT0012770003
Normal
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
