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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MORF4L2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
105.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
451.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
329.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
322.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
306.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
298.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
264.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
254.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
240.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
239.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
237.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
236.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
235.9
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
228.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
225.9
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
208.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
204.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
203.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
201.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
196.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
194.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
193.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
192.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
192.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
187.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
186.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
185.8
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
185.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
184.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
184.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
181.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
180.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
178.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
177.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
172.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
170.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
170.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
169.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
169.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
169.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
169.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
167.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
166.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
166.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
165.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
163.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
162.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
161.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
161.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
160.5
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
158.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
156.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
155.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
155.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
154.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
152.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
152.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
150.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
150.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
149.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
147.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
147.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
147.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
145.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
144.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
141.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
141.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
140.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
140.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
140.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
140.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
140.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
139.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
139.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
139.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
138.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
138.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
136.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
136.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
135.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
135.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
134.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
133.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
133.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
133.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
133.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
132.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
131.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
130.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
129.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
128.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
128.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
128.5
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
127.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
127.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
126.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
126.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
126.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
126.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
125.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
124.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
123.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
122.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
121.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
120.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
120.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
119.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
118.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
118.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
117.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
117.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
116.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
116.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
115.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
114.9
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
114.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
114.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
114.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
114.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
113.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
113.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
112.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
112.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
112.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
112.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
112.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
112.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
112.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
109.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
109.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
109.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
109.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
109.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
109.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
108.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
108.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
108.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
107.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
107.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
106.8
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
106.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
106.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
106.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
105.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
105.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
105.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
105.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
104.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
104.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
104.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
104.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
103.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
103.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
103.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
103.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
102.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
102.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
101.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
100.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
100.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
100.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
100.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
100.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
99.8
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
99.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
99.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
98.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
98.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
98.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
98.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
97.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
97.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
96.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
96.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
96.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
96.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
96.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
95.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
95.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
95.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
95.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
95.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
95.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
94.9
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
94.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
94.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
94.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
93.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
93.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
93.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
93.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
93.3
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
93.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
92.9
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
92.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
92.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
92.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
91.9
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
91.5
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
91.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
91.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
90.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
90.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
90.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
90.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
89.8
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
89.5
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
88.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
88.9
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
88.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
88.3
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
88.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
87.6
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
87.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
87.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
87.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
86.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
86.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
86.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
86.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
86.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
86.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
86.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
86.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
85.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
84.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
84.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
84.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
84.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
84.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
84.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
82.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
82.8
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
82.8
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
82.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
81.9
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
81.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
80.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
80.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
80.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
80.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
80.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
80.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
79.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
78.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
78.6
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
78.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
78.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
77.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
76.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
76.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
76.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
76.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
75.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
75.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
75.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
75.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
74.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
74.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
74.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
74.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
72.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
72.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
72.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
72.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
72.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
71.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
71.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
70.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
70.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
70.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
69.8
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
69.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
69.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
69.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
69.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
69.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
69.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
68.9
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
68.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
68.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
67.7
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
67.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
67.0
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
66.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
66.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
65.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
65.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
65.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
65.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
65.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
64.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
64.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
64.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
64.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
63.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
63.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
63.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
63.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
62.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
62.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
62.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
62.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
62.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
62.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
62.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
61.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
61.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
60.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
59.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
59.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
59.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
59.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
58.7
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
58.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
57.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
57.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
56.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
55.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
55.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
55.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
54.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
53.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
51.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
51.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
50.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
50.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
49.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
49.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
49.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
48.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
48.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
47.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
47.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
47.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
46.5
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
45.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
45.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
44.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
42.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
40.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
37.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
36.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
35.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
34.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
33.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
33.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
32.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
32.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
30.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
30.2
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
29.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
27.3
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
25.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
24.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
24.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
23.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
22.7
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
21.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
19.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
17.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
15.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MORF4L2 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
131.9
Number of samples
231
Samples
Sample
Description
TPM
DO23544
0 years, male, NA, stage:2, alive, 960 days
328.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
313.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
305.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
297.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
290.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
283.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
279.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
272.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
252.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
240.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
236.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
229.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
229.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
227.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
225.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
214.1
DO23518
0 years, male, NA, stage:2, alive, 1320 days
210.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
209.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
207.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
205.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
199.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
198.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
197.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
197.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
196.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
193.7
DO45145
0 years, male, NA, stage:3, dead, 60 days
191.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
191.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
189.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
187.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
181.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
181.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
179.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
179.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
178.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
178.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
177.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
177.1
DO23552
0 years, female, NA, stage:1, alive, 810 days
176.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
174.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
171.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
171.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
171.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
170.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
167.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
166.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
164.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
164.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
164.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
163.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
162.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
160.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
159.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
158.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
158.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
158.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
156.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
156.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
156.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
154.9
DO48728
0 years, female, NA, stage:2, alive, 150 days
154.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
154.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
152.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
151.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
150.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
148.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
148.0
DO23510
0 years, female, NA, stage:2, alive, 870 days
146.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
145.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
144.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
144.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
144.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
143.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
142.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
141.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
141.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
139.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
139.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
139.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
138.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
136.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
136.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
136.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
135.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
134.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
133.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
132.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
132.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
132.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
131.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
131.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
131.1
DO23546
0 years, male, NA, stage:2, alive, 1050 days
130.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
130.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
130.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
130.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
130.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
130.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
130.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
129.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
129.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
128.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
128.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
127.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
127.8
DO50859
0 years, male, NA, stage:2, alive, 180 days
127.4
DO48746
0 years, male, NA, stage:3, alive, 570 days
124.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
124.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
124.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
123.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
123.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
123.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
123.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
122.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
122.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
121.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
121.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
120.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
120.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
119.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
119.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
119.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
119.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
118.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
118.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
118.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
118.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
118.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
117.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
117.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
116.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
116.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
114.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
113.7
DO48725
0 years, male, NA, stage:1, alive, 780 days
113.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
113.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
113.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
112.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
111.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
111.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
110.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
110.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
109.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
109.6
DO45131
0 years, male, NA, stage:4, dead, 360 days
109.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
108.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
108.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
108.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
108.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
108.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
107.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
107.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
106.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
105.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
105.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
105.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
105.0
DO45129
0 years, male, NA, stage:3, alive, 1470 days
104.7
DO45177
0 years, female, NA, stage:3, alive, 1260 days
104.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
103.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
102.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
102.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
102.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
102.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
102.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
102.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
101.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
101.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
101.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
101.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
100.3
DO45115
0 years, male, NA, stage:2, alive, 840 days
100.1
DO23515
0 years, male, NA, stage:2, alive, 1230 days
99.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
99.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
98.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
98.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
97.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
97.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
96.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
96.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
96.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
94.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
94.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
93.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
93.4
DO23550
0 years, male, NA, stage:1, alive, 990 days
93.2
DO48716
0 years, male, NA, stage:2, alive, 720 days
92.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
92.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
92.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
90.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
89.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
89.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
88.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
88.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
88.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
87.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
86.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
86.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
84.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
84.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
82.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
82.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
81.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
81.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
79.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
79.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
76.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
76.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
76.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
76.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
76.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
74.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
74.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
72.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
72.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
71.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
71.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
71.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
69.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
68.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
68.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
65.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
64.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
61.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
60.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
59.3
DO45109
0 years, male, NA, stage:2, alive, 1590 days
55.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
51.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
51.0
DO50814
0 years, male, NA, stage:3, alive, 420 days
40.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
25.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
965
Tumor
2.1
497
Tumor
1.6
977
Tumor
1.1
647
Tumor
1.0
951
Tumor
0.9
411
Tumor
0.9
913
Tumor
0.9
865
Tumor
0.9
724
Normal
0.9
351
Tumor
0.9
171
Tumor
0.9
131
Tumor
0.8
743
Tumor
0.8
937
Tumor
0.8
883
Tumor
0.8
285
Tumor
0.8
277
Tumor
0.8
473
Tumor
0.8
983
Tumor
0.7
211
Tumor
0.7
385
Tumor
0.7
1013
Tumor
0.7
545
Tumor
0.7
881
Tumor
0.6
663
Tumor
0.6
957
Tumor
0.6
817
Tumor
0.6
467
Tumor
0.6
685
Tumor
0.5
557
Tumor
0.5
425
Tumor
0.5
813
Tumor
0.5
814
Normal
0.5
863
Tumor
0.5
737
Tumor
0.5
963
Tumor
0.5
343
Tumor
0.5
431
Tumor
0.5
493
Tumor
0.5
665
Tumor
0.5
1031
Tumor
0.4
487
Tumor
0.4
447
Tumor
0.4
463
Tumor
0.4
161
Tumor
0.4
857
Tumor
0.4
671
Tumor
0.4
527
Tumor
0.4
537
Tumor
0.4
533
Tumor
0.4
383
Tumor
0.4
975
Tumor
0.3
921
Tumor
0.3
823
Tumor
0.3
481
Tumor
0.3
331
Tumor
0.3
573
Tumor
0.3
1021
Tumor
0.3
123
Tumor
0.3
283
Tumor
0.3
311
Tumor
0.3
815
Tumor
0.3
483
Tumor
0.3
427
Tumor
0.3
861
Tumor
0.3
917
Tumor
0.3
923
Tumor
0.3
567
Tumor
0.3
721
Tumor
0.2
535
Tumor
0.2
433
Tumor
0.2
367
Tumor
0.2
873
Tumor
0.2
571
Tumor
0.2
221
Tumor
0.2
135
Tumor
0.2
313
Tumor
0.2
341
Tumor
0.2
413
Tumor
0.2
112
Tumor
0.2
357
Tumor
0.2
395
Tumor
0.2
445
Tumor
0.2
465
Tumor
0.2
217
Tumor
0.2
553
Tumor
0.2
697
Tumor
0.2
261
Tumor
0.2
271
Tumor
0.2
471
Tumor
0.2
355
Tumor
0.2
777
Tumor
0.2
523
Tumor
0.2
955
Tumor
0.2
641
Tumor
0.2
877
Tumor
0.1
435
Tumor
0.1
563
Tumor
0.1
443
Tumor
0.1
727
Tumor
0.1
213
Tumor
0.1
695
Tumor
0.1
127
Tumor
0.1
461
Tumor
0.1
741
Tumor
0.1
422
Normal
0.1
428
Normal
0.1
515
Tumor
0.1
297
Tumor
0.1
661
Tumor
0.1
525
Tumor
0.0
231
Tumor
0.0
141
Tumor
0.0
953
Tumor
0.0
415
Tumor
0.0
1025
Tumor
0.0
617
Tumor
0.0
455
Tumor
0.0
223
Tumor
0.0
391
Tumor
0.0
851
Tumor
0.0
393
Tumor
0.0
635
Tumor
0.0
113
Tumor
0.0
1015
Tumor
0.0
1022
Normal
0.0
352
Normal
0.0
858
Normal
-0.1
424
Normal
-0.1
414
Normal
-0.1
147
Tumor
-0.1
943
Tumor
-0.1
361
Tumor
-0.1
137
Tumor
-0.1
1043
Tumor
-0.1
816
Normal
-0.1
498
Normal
-0.1
1026
Normal
-0.1
145
Tumor
-0.1
785
Tumor
-0.1
426
Normal
-0.1
125
Tumor
-0.1
964
Normal
-0.1
627
Tumor
-0.1
967
Tumor
-0.1
715
Tumor
-0.1
423
Tumor
-0.1
375
Tumor
-0.1
477
Tumor
-0.1
421
Tumor
-0.1
536
Normal
-0.1
956
Normal
-0.1
513
Tumor
-0.1
267
Tumor
-0.1
968
Normal
-0.1
387
Tumor
-0.2
911
Tumor
-0.2
713
Tumor
-0.2
984
Normal
-0.2
1032
Normal
-0.2
446
Normal
-0.2
257
Tumor
-0.2
862
Normal
-0.2
1042
Normal
-0.2
958
Normal
-0.2
488
Normal
-0.2
517
Tumor
-0.2
615
Tumor
-0.2
344
Normal
-0.2
353
Tumor
-0.2
227
Tumor
-0.2
1027
Tumor
-0.2
185
Tumor
-0.2
434
Normal
-0.2
187
Tumor
-0.2
444
Normal
-0.2
824
Normal
-0.2
1041
Tumor
-0.2
363
Tumor
-0.2
966
Normal
-0.2
384
Normal
-0.2
1044
Normal
-0.2
976
Normal
-0.2
867
Tumor
-0.2
818
Normal
-0.2
978
Normal
-0.2
416
Normal
-0.2
868
Normal
-0.2
744
Normal
-0.2
364
Normal
-0.2
558
Normal
-0.2
1045
Tumor
-0.2
342
Normal
-0.3
864
Normal
-0.3
191
Tumor
-0.3
142
Normal
-0.3
952
Normal
-0.3
878
Normal
-0.3
852
Normal
-0.3
492
Normal
-0.3
742
Normal
-0.3
365
Tumor
-0.3
954
Normal
-0.3
866
Normal
-0.3
672
Normal
-0.3
114
Normal
-0.3
327
Tumor
-0.3
128
Normal
-0.3
912
Normal
-0.3
916
Normal
-0.3
451
Tumor
-0.3
572
Normal
-0.3
126
Normal
-0.3
518
Normal
-0.3
1046
Normal
-0.3
574
Normal
-0.3
786
Normal
-0.3
524
Normal
-0.3
368
Normal
-0.3
472
Normal
-0.3
1028
Normal
-0.3
482
Normal
-0.3
354
Normal
-0.3
478
Normal
-0.3
436
Normal
-0.3
944
Normal
-0.3
755
Tumor
-0.3
728
Normal
-0.3
882
Normal
-0.3
568
Normal
-0.3
778
Normal
-0.3
874
Normal
-0.3
466
Normal
-0.3
924
Normal
-0.3
474
Normal
-0.3
756
Normal
-0.4
464
Normal
-0.4
124
Normal
-0.4
981
Tumor
-0.4
468
Normal
-0.4
268
Normal
-0.4
723
Tumor
-0.4
534
Normal
-0.4
228
Normal
-0.4
284
Normal
-0.4
456
Normal
-0.4
494
Normal
-0.4
196
Normal
-0.4
362
Normal
-0.4
484
Normal
-0.4
538
Normal
-0.4
358
Normal
-0.4
491
Tumor
-0.4
738
Normal
-0.4
192
Normal
-0.4
564
Normal
-0.4
938
Normal
-0.4
195
Tumor
-0.4
884
Normal
-0.4
745
Tumor
-0.4
922
Normal
-0.4
448
Normal
-0.4
925
Tumor
-0.4
328
Normal
-0.4
926
Normal
-0.4
286
Normal
-0.4
982
Normal
-0.4
218
Normal
-0.4
412
Normal
-0.4
528
Normal
-0.4
214
Normal
-0.4
746
Normal
-0.4
628
Normal
-0.4
1016
Normal
-0.4
376
Normal
-0.4
698
Normal
-0.4
111
Normal
-0.4
462
Normal
-0.4
432
Normal
-0.5
224
Normal
-0.5
172
Normal
-0.5
146
Normal
-0.5
722
Normal
-0.5
212
Normal
-0.5
546
Normal
-0.5
1014
Normal
-0.5
186
Normal
-0.5
188
Normal
-0.5
915
Tumor
-0.5
918
Normal
-0.5
686
Normal
-0.5
664
Normal
-0.5
222
Normal
-0.5
716
Normal
-0.5
262
Normal
-0.5
298
Normal
-0.5
148
Normal
-0.6
272
Normal
-0.6
648
Normal
-0.6
616
Normal
-0.6
132
Normal
-0.6
554
Normal
-0.6
162
Normal
-0.6
356
Normal
-0.6
662
Normal
-0.6
452
Normal
-0.6
914
Normal
-0.6
526
Normal
-0.6
396
Normal
-0.6
514
Normal
-0.6
714
Normal
-0.6
314
Normal
-0.6
258
Normal
-0.6
366
Normal
-0.6
138
Normal
-0.6
516
Normal
-0.7
618
Normal
-0.7
636
Normal
-0.7
136
Normal
-0.7
232
Normal
-0.7
312
Normal
-0.7
386
Normal
-0.7
392
Normal
-0.8
666
Normal
-0.8
642
Normal
-0.8
332
Normal
-0.8
278
Normal
-0.8
696
Normal
-0.8
394
Normal
-0.8
388
Normal
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
