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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
40.9
nTPM
HPA Brain:
47.5
nTPM
GTEx:
40.9
nTPM
FANTOM5:
32.6
Scaled Tags Per Million
Pig:
11.6
nTPM
Mouse:
33.9
nTPM
Allen mouse:
7.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
47.5
Sample id
Sample description
nTPM
Amygdala nTPM: 29.6
1987
Female, age 91, left hemisphere
39.0
2695
Female, age 67, right hemisphere
32.3
2814
Male, age 76, right hemisphere
28.3
2514
Male, age 75, right hemisphere
27.0
2517
Female, age 94, left hemisphere
21.6
Basal amygdala nTPM: 42.8
2827
Female, age 67, right hemisphere
108.9
1955
Male, age 76, both hemispheres
33.9
2609
Male, age 75, right hemisphere
32.7
2685
Female, age 94, left hemisphere
30.0
2243
Female, age 91, right hemisphere
27.0
2110
Male, age 80, left hemisphere
24.7
Central amygdala nTPM: 33.3
2826
Female, age 94, left hemisphere
56.2
2701
Female, age 91, right hemisphere
38.5
2239
Male, age 80, left hemisphere
27.2
2515
Male, age 75, right hemisphere
25.5
1905
Male, age 76, both hemispheres
19.1
Corticomedial amygdala nTPM: 30.1
2535
Female, age 67, right hemisphere
49.5
2240
Male, age 76, both hemispheres
36.4
2242
Female, age 91, right hemisphere
27.1
2829
Male, age 80, left hemisphere
25.9
2428
Male, age 75, right hemisphere
24.4
2429
Female, age 94, left hemisphere
17.1
Lateral amygdala nTPM: 47.5
2830
Female, age 67, right hemisphere
129.0
2534
Female, age 94, left hemisphere
38.1
2256
Male, age 80, left hemisphere
32.4
2516
Male, age 75, right hemisphere
32.3
2255
Female, age 91, right hemisphere
30.6
1883
Male, age 76, both hemispheres
23.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
40.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 40.9
Samples: 152
Max nTPM: 420.3
Min nTPM: 4.2
Std nTPM: 55.1
Median nTPM: 19.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
420.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
262.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
236.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
215.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
171.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
148.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
144.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
139.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
135.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
132.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
127.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
117.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
112.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
110.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
109.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
98.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
97.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
95.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
92.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
90.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
86.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
84.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
82.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
79.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
77.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
75.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
73.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
70.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
64.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
64.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
64.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
61.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
56.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
55.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
52.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
51.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
50.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
50.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
46.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
45.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
45.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
45.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
44.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
44.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
41.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
40.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
38.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
36.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
35.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
30.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
30.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
29.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
29.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
29.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
28.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
28.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
28.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
27.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
27.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
27.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
26.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
25.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
25.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
24.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
24.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
23.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
23.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
22.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
21.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
21.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
21.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
21.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
21.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
20.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
19.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
19.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
19.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
18.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
18.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
18.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
18.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
17.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
17.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
16.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
16.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
16.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
15.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
15.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
15.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
15.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
15.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
15.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
14.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
14.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
14.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
13.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
13.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
12.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
12.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
12.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
12.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
12.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
11.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
11.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
11.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
11.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
11.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
11.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
11.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
11.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
11.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
11.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
11.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
10.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
10.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
10.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
10.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
10.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
9.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
9.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
9.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
9.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
8.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
8.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
8.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
8.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
8.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
8.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
8.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
8.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
7.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
7.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
7.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
7.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
6.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
6.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
6.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
6.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
6.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
6.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
5.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
5.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
5.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
5.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
5.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
5.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
5.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
4.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
4.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
4.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
4.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
4.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
33.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 33.9
Samples: 4
Max nTPM: 49.1
Min nTPM: 17.9
Sample A
Male
33.5
Sample B
Male
49.1
Sample C
Female
17.9
Sample D
Female
35.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.