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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PFDN5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
402.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
817.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
764.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
670.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
624.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
621.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
563.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
524.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
524.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
513.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
504.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
495.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
486.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
481.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
475.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
467.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
462.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
452.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
449.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
446.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
446.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
439.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
436.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
431.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
427.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
417.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
416.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
413.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
407.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
407.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
407.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
406.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
400.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
393.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
389.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
386.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
381.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
378.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
372.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
364.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
360.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
356.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
354.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
341.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
341.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
339.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
337.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
334.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
325.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
320.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
316.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
303.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
302.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
299.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
294.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
262.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
260.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
258.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
250.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
248.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
240.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
216.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
212.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
208.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PFDN5 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
860.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4479.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
2988.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1974.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
1967.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
1944.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
1866.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
1824.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
1813.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
1793.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
1766.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
1742.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
1628.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
1596.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
1588.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
1574.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
1525.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
1515.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
1498.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
1496.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
1456.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
1433.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
1418.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
1405.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
1404.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
1370.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
1362.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
1355.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
1350.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
1346.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
1334.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
1322.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
1307.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
1297.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
1268.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
1253.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
1250.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
1247.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
1244.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
1243.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
1242.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
1241.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
1238.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
1238.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
1230.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
1225.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
1222.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
1221.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
1209.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
1196.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
1190.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1189.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
1182.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
1181.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
1180.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
1170.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
1166.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
1163.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
1162.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
1155.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
1147.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
1147.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
1146.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
1145.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
1140.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
1137.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1136.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
1135.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
1132.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
1127.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
1126.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
1122.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
1121.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
1117.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
1105.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
1099.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
1098.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
1096.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
1094.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1084.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
1084.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
1076.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
1074.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
1071.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
1070.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
1069.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
1065.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
1053.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
1050.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
1050.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
1049.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
1046.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
1045.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
1044.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
1042.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
1038.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
1028.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
1027.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
1027.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
1023.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
1023.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
1017.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
1014.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
1013.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
1009.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
1004.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
1002.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
1001.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
998.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
993.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
991.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
990.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
990.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
990.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
990.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
988.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
983.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
981.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
979.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
979.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
979.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
978.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
978.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
977.3
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
975.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
974.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
970.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
969.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
968.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
968.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
964.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
964.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
961.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
960.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
960.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
959.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
959.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
958.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
956.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
953.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
952.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
951.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
951.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
951.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
950.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
947.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
946.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
942.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
942.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
941.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
941.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
941.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
940.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
940.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
940.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
940.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
937.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
935.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
933.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
930.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
930.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
929.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
927.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
926.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
925.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
923.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
922.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
921.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
920.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
919.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
917.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
914.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
914.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
914.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
914.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
913.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
912.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
912.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
911.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
910.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
908.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
906.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
904.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
903.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
900.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
899.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
899.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
898.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
896.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
896.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
892.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
891.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
890.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
888.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
888.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
888.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
887.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
886.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
885.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
884.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
884.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
883.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
883.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
879.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
878.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
877.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
875.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
873.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
870.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
869.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
868.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
868.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
860.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
860.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
856.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
855.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
855.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
851.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
851.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
850.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
850.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
850.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
850.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
846.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
843.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
843.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
842.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
841.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
840.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
837.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
837.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
837.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
836.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
835.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
832.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
831.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
830.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
829.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
829.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
828.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
827.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
827.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
827.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
825.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
825.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
824.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
824.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
823.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
822.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
822.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
820.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
818.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
817.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
816.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
816.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
815.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
815.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
814.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
813.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
812.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
812.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
812.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
811.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
810.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
809.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
809.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
809.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
808.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
807.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
806.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
803.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
803.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
803.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
801.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
795.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
795.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
795.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
794.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
793.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
793.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
793.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
788.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
786.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
784.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
784.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
783.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
783.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
782.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
782.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
782.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
782.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
781.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
781.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
780.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
779.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
779.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
778.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
778.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
777.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
777.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
777.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
775.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
773.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
773.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
773.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
772.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
772.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
771.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
771.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
770.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
769.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
769.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
767.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
766.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
765.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
765.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
764.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
762.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
761.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
761.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
761.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
760.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
758.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
758.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
757.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
755.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
754.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
753.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
753.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
752.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
752.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
751.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
748.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
748.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
747.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
742.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
742.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
740.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
740.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
740.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
740.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
739.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
737.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
735.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
735.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
734.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
733.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
731.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
729.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
728.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
726.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
724.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
722.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
721.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
721.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
720.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
719.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
718.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
717.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
717.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
715.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
715.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
712.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
712.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
711.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
710.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
709.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
708.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
707.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
706.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
706.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
706.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
704.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
704.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
704.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
703.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
703.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
695.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
694.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
694.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
693.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
693.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
691.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
686.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
685.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
684.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
680.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
680.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
680.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
679.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
677.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
676.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
676.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
675.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
674.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
672.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
672.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
671.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
668.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
668.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
667.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
666.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
665.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
665.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
664.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
664.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
662.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
662.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
661.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
660.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
659.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
659.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
657.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
657.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
655.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
655.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
654.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
652.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
650.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
644.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
644.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
640.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
640.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
640.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
639.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
639.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
638.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
637.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
635.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
634.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
632.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
630.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
628.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
627.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
625.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
625.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
622.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
622.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
621.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
620.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
620.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
619.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
619.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
619.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
618.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
618.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
614.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
614.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
613.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
605.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
601.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
600.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
598.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
598.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
597.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
594.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
590.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
588.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
585.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
581.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
581.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
579.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
579.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
579.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
572.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
569.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
569.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
566.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
562.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
560.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
560.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
555.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
552.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
551.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
550.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
547.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
542.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
542.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
538.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
537.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
537.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
535.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
534.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
531.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
529.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
528.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
521.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
521.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
517.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
516.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
515.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
510.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
509.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
504.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
501.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
500.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
499.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
496.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
487.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
483.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
459.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
454.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
453.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
452.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
451.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
445.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
441.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
433.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
417.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
416.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
412.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
409.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
404.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
371.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
367.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
363.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
361.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
341.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
310.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
288.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
285.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PFDN5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
706.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
1897.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
1352.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
1107.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
1087.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
1032.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
1019.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
973.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
957.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
953.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
944.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
915.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
914.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
914.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
913.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
908.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
897.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
888.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
861.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
860.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
856.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
830.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
823.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
822.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
808.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
799.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
796.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
784.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
777.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
769.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
760.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
760.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
760.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
747.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
738.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
736.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
732.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
721.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
714.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
712.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
710.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
706.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
697.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
695.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
692.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
689.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
686.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
678.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
678.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
677.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
674.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
674.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
672.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
666.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
665.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
664.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
661.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
658.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
649.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
648.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
647.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
637.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
637.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
636.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
634.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
628.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
628.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
628.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
615.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
612.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
607.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
605.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
595.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
591.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
586.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
583.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
582.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
580.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
566.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
561.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
554.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
549.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
540.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
534.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
521.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
518.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
518.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
515.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
510.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
509.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
503.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
501.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
487.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
486.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
476.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
475.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
462.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
461.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
413.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
302.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PFDN5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
645.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1772.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
1581.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
1515.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
1481.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
1462.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1350.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
1347.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
1328.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
1278.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1258.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
1245.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
1231.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
1211.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1161.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
1150.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
1088.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
1063.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
1054.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1050.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
1048.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
1020.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1009.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
1001.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
990.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
987.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
981.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
972.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
962.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
961.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
952.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
952.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
937.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
935.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
934.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
928.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
910.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
908.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
903.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
898.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
895.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
888.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
887.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
887.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
885.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
884.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
883.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
879.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
878.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
877.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
869.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
868.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
868.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
867.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
862.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
855.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
853.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
844.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
843.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
837.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
832.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
829.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
828.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
827.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
827.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
826.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
825.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
824.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
816.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
812.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
811.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
806.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
801.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
796.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
796.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
792.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
791.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
790.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
786.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
786.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
786.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
785.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
775.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
773.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
770.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
767.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
767.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
764.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
763.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
760.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
757.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
754.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
753.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
751.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
750.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
746.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
741.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
736.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
734.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
732.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
730.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
728.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
718.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
717.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
712.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
712.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
709.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
697.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
696.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
694.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
691.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
691.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
690.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
685.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
684.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
679.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
676.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
670.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
669.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
669.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
668.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
661.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
658.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
654.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
652.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
652.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
642.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
638.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
638.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
632.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
630.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
622.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
620.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
620.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
620.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
616.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
615.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
614.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
611.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
610.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
608.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
608.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
602.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
598.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
594.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
592.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
586.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
585.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
581.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
580.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
576.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
576.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
566.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
565.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
563.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
562.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
562.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
559.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
557.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
556.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
555.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
555.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
555.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
552.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
545.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
543.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
543.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
540.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
536.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
532.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
529.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
528.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
528.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
523.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
522.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
519.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
519.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
518.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
511.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
511.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
506.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
505.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
503.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
498.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
496.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
496.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
495.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
495.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
491.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
491.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
490.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
490.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
489.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
488.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
488.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
487.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
486.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
485.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
483.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
483.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
475.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
474.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
473.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
473.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
472.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
467.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
465.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
464.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
457.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
457.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
457.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
456.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
455.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
451.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
444.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
443.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
443.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
439.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
439.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
437.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
435.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
433.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
432.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
432.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
432.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
429.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
426.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
424.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
420.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
420.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
419.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
416.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
414.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
409.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
408.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
406.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
406.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
394.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
394.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
388.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
383.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
380.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
374.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
371.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
370.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
369.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
365.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
363.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
355.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
349.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
345.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
341.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
336.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
334.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
331.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
329.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
329.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
325.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
323.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
320.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
314.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
310.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
310.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
304.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
303.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
300.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
298.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
295.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
293.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
292.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
290.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
287.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
286.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
279.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
277.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
263.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
259.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
250.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
224.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
220.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
203.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
186.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
174.7
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0000640003
Tumor
1.1
CPT0001340003
Tumor
0.9
CPT0078660003
Tumor
0.8
CPT0086950003
Tumor
0.7
CPT0001540009
Tumor
0.7
CPT0024670003
Tumor
0.7
CPT0025880003
Tumor
0.7
CPT0084560003
Tumor
0.6
CPT0012280003
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0088970003
Tumor
0.6
CPT0069000003
Tumor
0.6
CPT0021240003
Tumor
0.6
CPT0079180003
Tumor
0.6
CPT0009000003
Tumor
0.6
CPT0009060003
Tumor
0.6
CPT0017410003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0085670003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0065930003
Tumor
0.4
CPT0006440003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0012080003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0064370003
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0015730003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0006630003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0019990003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0012900004
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0079230003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0007860003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0063320003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0088550004
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0012180003
Tumor
0.1
CPT0065870003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0092290003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0010120001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0066430001
Normal
-0.2
CPT0009080003
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0000660001
Normal
-0.2
CPT0014160003
Tumor
-0.2
CPT0014470001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0089480003
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0075570001
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0015910003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0063330001
Normal
-0.3
CPT0077320001
Normal
-0.3
CPT0086890003
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0066480003
Tumor
-0.4
CPT0087050003
Normal
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.