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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WWP1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
120.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
115.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
104.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
95.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
93.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
89.2
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
88.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
86.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
83.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
82.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
81.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
79.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
78.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
76.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
76.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
76.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
74.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
73.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
73.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
72.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
71.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
71.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
71.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
70.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
69.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
68.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
67.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
66.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
66.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
65.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
64.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
64.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
63.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
62.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
61.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
61.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
60.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
59.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
59.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
59.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
59.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
58.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
57.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
57.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
56.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
56.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
56.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
56.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
55.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
53.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
53.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
53.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
53.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
53.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
53.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
53.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
52.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
52.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
52.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
52.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
51.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
51.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
51.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
51.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
50.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
50.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
50.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
50.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
49.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
49.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
48.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
48.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
48.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
48.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
48.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
47.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
47.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
46.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
46.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
46.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
46.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
46.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
46.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
45.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
45.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
45.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
44.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
43.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
43.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
43.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
42.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
42.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
42.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
42.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
42.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
42.2
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
41.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
41.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
40.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
40.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
40.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
40.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
40.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
40.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
40.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
39.6
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
39.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
38.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
38.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
38.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
38.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
38.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
38.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
38.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
38.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
37.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
37.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
37.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
37.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
37.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
36.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
36.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
36.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
36.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
36.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
35.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
35.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
35.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
35.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
34.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
34.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
34.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
34.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
34.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
34.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
34.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
34.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
34.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
33.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
33.8
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
33.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
33.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
33.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
33.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
32.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
32.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
32.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
32.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
32.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
31.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
31.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
31.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
31.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
31.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
31.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
31.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
31.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
31.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
30.9
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
30.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
30.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
30.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
30.2
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
30.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
30.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
30.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
29.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
29.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
29.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
28.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
28.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
28.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
28.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
28.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
28.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
28.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
28.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
28.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
27.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
27.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
27.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
27.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
27.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
27.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
27.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
26.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
26.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
26.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
26.1
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
26.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
25.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
25.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
25.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
25.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
25.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
25.4
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
25.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
25.1
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
25.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
24.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
24.8
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
24.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
24.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
24.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
24.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
24.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
24.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
24.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
24.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
24.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
24.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
23.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
23.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
23.5
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
23.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
23.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
23.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
22.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
22.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
22.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
22.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
22.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
22.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
22.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
22.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
22.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
22.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
22.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
22.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
21.7
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
21.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
21.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
21.3
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
21.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
21.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
21.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
20.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
20.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
20.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
20.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
20.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
20.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
20.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
20.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
20.2
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
20.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
20.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
20.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
19.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
19.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
19.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
19.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
19.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
19.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
19.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
19.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
19.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
19.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
19.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
18.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
18.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
18.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
18.6
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
18.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
18.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
18.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
18.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
17.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
17.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.9
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
17.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
17.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
17.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
17.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
17.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
17.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
17.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
17.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
17.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
17.1
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
17.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
16.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
16.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
16.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
16.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
16.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
16.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
16.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
16.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
16.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
16.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
16.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
15.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
15.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
15.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
15.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
15.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
15.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
15.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
15.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
15.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
14.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
14.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
14.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
14.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
14.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
14.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
14.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
14.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
13.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
13.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
13.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
13.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
13.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
13.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
12.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
12.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
12.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
12.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
12.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
12.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
12.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
12.3
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
12.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
12.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
11.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
11.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
11.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
11.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
11.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
11.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
10.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
10.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
10.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
10.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
10.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
10.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
10.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
10.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
10.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
10.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
10.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
9.5
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
9.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
9.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
8.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
8.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
7.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
7.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
7.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
6.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
5.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
5.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
4.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
4.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
4.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
WWP1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.3
Number of samples
231
Samples
Sample
Description
TPM
DO48672
0 years, male, NA, stage:2, alive, 450 days
189.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
134.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
125.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
123.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
121.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
112.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
101.5
DO45279
0 years, male, NA, stage:3, alive, 1290 days
98.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
95.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
91.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
91.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
91.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
89.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
88.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
86.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
85.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
84.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
82.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
82.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
81.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
80.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
79.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
79.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
77.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
76.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
76.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
74.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
73.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
72.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
72.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
71.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
71.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
68.3
DO45163
0 years, male, NA, stage:2, alive, 960 days
67.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
67.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
66.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
65.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
65.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
64.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
62.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
62.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
62.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
62.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
62.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
61.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
59.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
59.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
58.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
57.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
57.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
57.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
55.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
54.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
54.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
54.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
54.1
DO48700
0 years, female, NA, stage:2, alive, 810 days
53.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
52.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
52.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
52.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
52.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
52.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
51.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
50.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
50.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
50.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
50.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
50.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
50.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
49.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
49.7
DO45237
0 years, male, NA, stage:2, alive, 900 days
49.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
49.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
49.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
49.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
48.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
48.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
48.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
48.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
48.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
47.4
DO45257
0 years, male, NA, stage:3, alive, 810 days
47.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
47.1
DO48751
0 years, male, NA, stage:2, dead, 480 days
47.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
46.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
44.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
44.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
44.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
44.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
44.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
44.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
44.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
44.0
DO50816
0 years, male, NA, stage:2, alive, 390 days
43.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
43.5
DO45099
0 years, male, NA, stage:3, alive, 1590 days
42.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
42.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
42.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
41.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
41.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
41.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
41.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
40.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
40.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
39.4
DO48681
0 years, male, NA, stage:2, alive, 900 days
39.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
38.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
38.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
38.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
38.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
38.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
37.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
37.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
37.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
37.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
37.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
37.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
36.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
36.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
36.4
DO45153
0 years, female, NA, stage:2, alive, 1380 days
36.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
36.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
35.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
35.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
35.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
34.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
34.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
34.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
33.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
33.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
32.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
32.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
32.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
32.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
32.5
DO45229
0 years, male, NA, stage:1, alive, 990 days
32.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
32.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
32.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
32.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
32.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
31.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
31.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
31.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
31.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
31.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
30.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
30.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
30.2
DO48732
0 years, male, NA, stage:3, alive, 630 days
30.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
29.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
29.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
29.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
29.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
29.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
29.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
28.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
28.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
28.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
27.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
27.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
27.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
27.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
27.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
26.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
26.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
26.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
26.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
26.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
25.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
25.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
25.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
25.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
25.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
24.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
24.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
24.9
DO45249
0 years, male, NA, stage:1, alive, 630 days
24.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
24.5
DO50802
0 years, male, NA, stage:2, alive, 930 days
24.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
24.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
23.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
23.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
23.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
23.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
23.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
23.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
23.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
22.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
22.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
22.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
22.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
21.2
DO23539
0 years, male, NA, stage:1, alive, 1110 days
21.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
21.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
21.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
20.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
20.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
20.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
19.9
DO45277
0 years, male, NA, stage:3, alive, 600 days
19.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
19.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
19.6
DO50845
0 years, male, NA, stage:3, alive, 210 days
19.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
19.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
19.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
19.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
19.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
19.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
19.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
19.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
18.9
DO227643
0 years, male, NA, stage:2, alive, 1260 days
18.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
18.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
18.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
18.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
17.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
17.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
16.8
DO45093
0 years, male, NA, stage:2, dead, 720 days
16.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
16.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
16.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
15.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
14.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
14.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
13.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
13.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
13.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
11.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
7.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
7.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
5.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
557
Tumor
0.9
715
Tumor
0.8
1025
Tumor
0.7
231
Tumor
0.7
865
Tumor
0.6
1041
Tumor
0.5
483
Tumor
0.5
937
Tumor
0.5
497
Tumor
0.5
267
Tumor
0.5
663
Tumor
0.5
473
Tumor
0.4
395
Tumor
0.4
413
Tumor
0.4
147
Tumor
0.4
127
Tumor
0.4
191
Tumor
0.4
171
Tumor
0.3
433
Tumor
0.3
742
Normal
0.3
745
Tumor
0.3
445
Tumor
0.3
493
Tumor
0.3
123
Tumor
0.3
912
Normal
0.3
823
Tumor
0.3
824
Normal
0.3
414
Normal
0.3
951
Tumor
0.3
427
Tumor
0.3
463
Tumor
0.3
435
Tumor
0.3
465
Tumor
0.3
353
Tumor
0.3
421
Tumor
0.3
431
Tumor
0.3
915
Tumor
0.2
884
Normal
0.2
426
Normal
0.2
958
Normal
0.2
436
Normal
0.2
518
Normal
0.2
815
Tumor
0.2
1022
Normal
0.2
851
Tumor
0.2
1013
Tumor
0.2
926
Normal
0.2
286
Normal
0.2
723
Tumor
0.2
124
Normal
0.2
428
Normal
0.2
818
Normal
0.2
471
Tumor
0.2
786
Normal
0.2
975
Tumor
0.2
432
Normal
0.2
977
Tumor
0.2
467
Tumor
0.2
484
Normal
0.2
443
Tumor
0.2
925
Tumor
0.2
635
Tumor
0.2
113
Tumor
0.2
698
Normal
0.2
514
Normal
0.2
481
Tumor
0.2
114
Normal
0.2
1046
Normal
0.2
186
Normal
0.2
778
Normal
0.2
376
Normal
0.2
342
Normal
0.2
534
Normal
0.2
356
Normal
0.2
451
Tumor
0.2
877
Tumor
0.2
111
Normal
0.2
862
Normal
0.2
423
Tumor
0.2
112
Tumor
0.1
746
Normal
0.1
424
Normal
0.1
446
Normal
0.1
756
Normal
0.1
858
Normal
0.1
968
Normal
0.1
641
Tumor
0.1
162
Normal
0.1
738
Normal
0.1
472
Normal
0.1
195
Tumor
0.1
422
Normal
0.1
938
Normal
0.1
728
Normal
0.1
332
Normal
0.1
868
Normal
0.1
187
Tumor
0.1
664
Normal
0.1
298
Normal
0.1
964
Normal
0.1
714
Normal
0.1
142
Normal
0.1
1026
Normal
0.1
744
Normal
0.1
648
Normal
0.1
526
Normal
0.1
666
Normal
0.1
568
Normal
0.1
425
Tumor
0.1
861
Tumor
0.1
1043
Tumor
0.1
277
Tumor
0.1
981
Tumor
0.1
261
Tumor
0.1
1032
Normal
0.1
185
Tumor
0.1
1014
Normal
0.1
966
Normal
0.1
222
Normal
0.1
448
Normal
0.1
314
Normal
0.1
145
Tumor
0.1
148
Normal
0.1
218
Normal
0.1
271
Tumor
0.1
616
Normal
0.1
128
Normal
0.1
952
Normal
0.1
922
Normal
0.1
196
Normal
0.1
258
Normal
0.1
1044
Normal
0.1
367
Tumor
0.1
223
Tumor
0.1
546
Normal
0.1
1016
Normal
0.1
462
Normal
0.1
434
Normal
0.1
528
Normal
0.1
488
Normal
0.1
686
Normal
0.1
313
Tumor
0.1
665
Tumor
0.1
482
Normal
0.1
642
Normal
0.1
696
Normal
0.1
882
Normal
0.1
358
Normal
0.0
916
Normal
0.0
878
Normal
0.0
364
Normal
0.0
866
Normal
0.0
716
Normal
0.0
918
Normal
0.0
963
Tumor
0.0
857
Tumor
0.0
852
Normal
0.0
452
Normal
0.0
126
Normal
0.0
362
Normal
0.0
257
Tumor
0.0
272
Normal
0.0
911
Tumor
0.0
392
Normal
0.0
494
Normal
0.0
456
Normal
0.0
976
Normal
0.0
721
Tumor
0.0
368
Normal
0.0
672
Normal
0.0
984
Normal
0.0
572
Normal
0.0
864
Normal
0.0
722
Normal
0.0
978
Normal
0.0
1015
Tumor
0.0
354
Normal
0.0
628
Normal
0.0
498
Normal
0.0
954
Normal
0.0
524
Normal
0.0
172
Normal
0.0
137
Tumor
0.0
411
Tumor
0.0
627
Tumor
0.0
636
Normal
0.0
816
Normal
0.0
944
Normal
0.0
574
Normal
0.0
515
Tumor
0.0
618
Normal
0.0
344
Normal
0.0
461
Tumor
0.0
217
Tumor
0.0
366
Normal
0.0
527
Tumor
0.0
412
Normal
0.0
341
Tumor
0.0
662
Normal
0.0
554
Normal
0.0
955
Tumor
0.0
416
Normal
0.0
1028
Normal
0.0
697
Tumor
0.0
343
Tumor
0.0
924
Normal
0.0
867
Tumor
0.0
388
Normal
0.0
394
Normal
0.0
1042
Normal
0.0
385
Tumor
0.0
982
Normal
-0.1
1021
Tumor
-0.1
396
Normal
-0.1
564
Normal
-0.1
536
Normal
-0.1
132
Normal
-0.1
468
Normal
-0.1
444
Normal
-0.1
615
Tumor
-0.1
464
Normal
-0.1
477
Tumor
-0.1
221
Tumor
-0.1
228
Normal
-0.1
375
Tumor
-0.1
146
Normal
-0.1
284
Normal
-0.1
136
Normal
-0.1
817
Tumor
-0.1
352
Normal
-0.1
232
Normal
-0.1
328
Normal
-0.1
914
Normal
-0.1
212
Normal
-0.1
874
Normal
-0.1
558
Normal
-0.1
312
Normal
-0.1
214
Normal
-0.1
138
Normal
-0.1
224
Normal
-0.1
724
Normal
-0.1
956
Normal
-0.1
967
Tumor
-0.1
487
Tumor
-0.1
365
Tumor
-0.1
538
Normal
-0.1
161
Tumor
-0.1
393
Tumor
-0.1
881
Tumor
-0.1
188
Normal
-0.1
1045
Tumor
-0.1
466
Normal
-0.1
351
Tumor
-0.1
567
Tumor
-0.1
492
Normal
-0.1
278
Normal
-0.1
785
Tumor
-0.1
135
Tumor
-0.1
525
Tumor
-0.1
813
Tumor
-0.1
268
Normal
-0.1
737
Tumor
-0.1
386
Normal
-0.1
537
Tumor
-0.2
474
Normal
-0.2
516
Normal
-0.2
384
Normal
-0.2
983
Tumor
-0.2
327
Tumor
-0.2
1027
Tumor
-0.2
192
Normal
-0.2
755
Tumor
-0.2
213
Tumor
-0.2
387
Tumor
-0.2
533
Tumor
-0.2
545
Tumor
-0.2
617
Tumor
-0.2
957
Tumor
-0.2
331
Tumor
-0.2
131
Tumor
-0.2
883
Tumor
-0.2
262
Normal
-0.2
361
Tumor
-0.2
363
Tumor
-0.2
873
Tumor
-0.2
415
Tumor
-0.2
1031
Tumor
-0.2
478
Normal
-0.2
913
Tumor
-0.2
777
Tumor
-0.2
513
Tumor
-0.2
965
Tumor
-0.2
921
Tumor
-0.2
741
Tumor
-0.3
814
Normal
-0.3
355
Tumor
-0.3
671
Tumor
-0.3
285
Tumor
-0.3
297
Tumor
-0.3
517
Tumor
-0.3
563
Tumor
-0.3
943
Tumor
-0.3
391
Tumor
-0.3
685
Tumor
-0.3
647
Tumor
-0.3
553
Tumor
-0.3
743
Tumor
-0.3
125
Tumor
-0.3
573
Tumor
-0.4
953
Tumor
-0.4
141
Tumor
-0.4
383
Tumor
-0.4
447
Tumor
-0.4
863
Tumor
-0.4
523
Tumor
-0.4
357
Tumor
-0.4
535
Tumor
-0.4
227
Tumor
-0.4
727
Tumor
-0.4
695
Tumor
-0.5
713
Tumor
-0.5
455
Tumor
-0.5
923
Tumor
-0.5
917
Tumor
-0.5
491
Tumor
-0.5
661
Tumor
-0.6
283
Tumor
-0.6
211
Tumor
-0.6
311
Tumor
-0.6
571
Tumor
-0.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
