HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:12.2 nTPM
HPA Brain:36.3 nTPM
GTEx:12.2 nTPM
FANTOM5:13.5 Scaled Tags Per Million
Pig:39.5 nTPM
Mouse:15.6 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023180
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 36.3
Sample id Sample description nTPM
Hippocampus
nTPM: 32.6
2529 Female, age 94, left hemisphere 36.6
1898 Male, age 80, left hemisphere 35.0
1911 Female, age 85, right hemisphere 34.4
1855 Male, age 76, left hemisphere 30.8
2621 Female, age 67, right hemisphere 29.8
2148 Female, age 91, left hemisphere 28.8
Dentate gyrus
nTPM: 32.3
2528 Male, age 74, both hemispheres 35.4
2010 Male, age 76, both hemispheres 34.1
2530 Female, age 94, left hemisphere 33.7
1927 Female, age 91, both hemispheres 32.5
2246 Female, age 85, both hemispheres 32.0
2531 Female, age 67, both hemispheres 26.0
Entorhinal gyrus
nTPM: 34.2
2117 Female, age 91, right hemisphere 38.3
1938 Female, age 85, left hemisphere 35.7
2764 Male, age 80, right hemisphere 35.6
1787 Male, age 76, left hemisphere 33.4
2686 Male, age 75, right hemisphere 32.3
2613 Female, age 94, left hemisphere 29.7
Hippocampus, CA1
nTPM: 33.1
2082 Female, age 91, right hemisphere 35.8
1873 Female, age 85, both hemispheres 35.4
2527 Male, age 74, both hemispheres 34.4
2749 Male, age 80, left hemisphere 32.6
2045 Male, age 76, both hemispheres 27.4
Hippocampus, CA2
nTPM: 33.8
2249 Male, age 74, both hemispheres 36.7
2113 Female, age 91, right hemisphere 34.6
2437 Female, age 94, left hemisphere 34.6
1963 Male, age 80, left hemisphere 32.7
1892 Male, age 76, both hemispheres 32.6
1940 Female, age 85, left hemisphere 31.6
Hippocampus, CA3
nTPM: 32.0
2436 Male, age 74, both hemispheres 39.7
1891 Female, age 85, both hemispheres 36.9
1867 Male, age 76, both hemispheres 32.5
2137 Male, age 80, left hemisphere 31.3
2861 Female, age 67, both hemispheres 26.2
2620 Female, age 94, left hemisphere 25.6
Parahippocampal cortex
nTPM: 35.1
1850 Male, age 80, both hemispheres 41.4
1990 Female, age 91, right hemisphere 38.9
1933 Female, age 85, both hemispheres 36.2
2692 Male, age 74, both hemispheres 36.1
2532 Female, age 72, left hemisphere 35.0
2693 Female, age 94, both hemispheres 34.0
2018 Male, age 76, both hemispheres 33.9
2245 Female, age 91, both hemispheres 33.9
2250 Female, age 67, right hemisphere 33.4
2622 Female, age 67, right hemisphere 27.8
Perirhinal gyrus
nTPM: 36.0
1847 Female, age 91, left hemisphere 39.1
1841 Female, age 85, right hemisphere 37.1
1794 Male, age 80, right hemisphere 36.2
2848 Male, age 76, right hemisphere 34.6
2521 Female, age 94, right hemisphere 32.8
Subiculum
nTPM: 36.3
2438 Female, age 94, left hemisphere 42.4
1901 Male, age 80, both hemispheres 37.8
1977 Female, age 85, both hemispheres 36.1
2042 Male, age 76, both hemispheres 35.1
2729 Female, age 91, right hemisphere 33.4
2619 Male, age 74, both hemispheres 32.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 12.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.2
Samples: 197

Max nTPM: 21.7
Min nTPM: 7.1
Std nTPM: 2.7
Median nTPM: 11.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 21.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 19.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 19.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 19.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 18.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 18.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 18.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 17.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 17.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 17.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 17.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 13.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.5
FF:10153-102I9 76 years, female 16.8
FF:10169-103B7 60 years, female 10.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 39.5
Pig sample Sample description nTPM
Subiculum
nTPM: 34.2
Samples: 4

Max nTPM: 41.2
Min nTPM: 31.4
Sample A Female 41.2
Sample B Female 31.4
Sample C Male 31.8
Sample D Male 32.5
Dorsal hippocampus
nTPM: 35.1
Samples: 4

Max nTPM: 41.3
Min nTPM: 26.1
Sample A Female 41.3
Sample B Female 36.3
Sample C Male 36.8
Sample D Male 26.1
Entorhinal cortex
nTPM: 39.6
Samples: 4

Max nTPM: 44.4
Min nTPM: 36.2
Sample A Female 36.2
Sample B Female 44.4
Sample C Male 38.1
Sample D Male 39.5
Ventral hippocampus
nTPM: 32.2
Samples: 4

Max nTPM: 36.7
Min nTPM: 27.0
Sample A Female 35.5
Sample B Female 29.6
Sample C Male 27.0
Sample D Male 36.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 15.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 16.0
Min nTPM: 15.0
Sample A Male 15.6
Sample B Male 15.8
Sample C Female 15.0
Sample D Female 16.0
Hippocampal formation
nTPM: 13.7
Samples: 4

Max nTPM: 14.9
Min nTPM: 12.9
Sample A Male 12.9
Sample B Male 13.5
Sample C Female 14.9
Sample D Female 13.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
69817079 Antisense, RP_050510_02_E12, Mouse strain C57BL/6J (56 days, male) 1.4

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