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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CYREN is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
53.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
51.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
48.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
44.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
43.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
42.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
42.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
40.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
35.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
33.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
31.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
29.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
28.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
27.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
27.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
25.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
25.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
24.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
24.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
23.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
22.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
21.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
21.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
21.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
20.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
20.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
19.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
19.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
19.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
19.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
19.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
19.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
18.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
18.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
18.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
17.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
17.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
17.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
17.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
17.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
17.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
17.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
16.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
16.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
16.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
16.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
16.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
15.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
14.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
14.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
13.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
13.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
13.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
12.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
11.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
11.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
10.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
9.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
8.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CYREN is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
92.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
71.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
63.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
62.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
61.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
61.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
61.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
60.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
60.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
58.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
58.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
57.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
56.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
54.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
54.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
54.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
53.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
53.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
53.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
52.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
52.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
51.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
51.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
50.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
50.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
48.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
47.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
47.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
47.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
46.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
45.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
45.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
44.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
44.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
44.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
44.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
44.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
44.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
43.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
43.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
43.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
43.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
43.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
42.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
41.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
41.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
41.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
41.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
41.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
41.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
40.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
40.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
40.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
40.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
40.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
40.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
40.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
40.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
40.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
40.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
39.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
39.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
39.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
39.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
38.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
38.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
38.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
38.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
38.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
38.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
38.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
38.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
38.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
37.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
37.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
37.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
37.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
37.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
37.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
37.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
37.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
36.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
36.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
36.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
36.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
36.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
36.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
36.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
36.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
36.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
36.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
36.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
35.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
35.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
35.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
35.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
35.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
35.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
35.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
35.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
35.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
35.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
35.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
35.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
35.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
34.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
34.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
34.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
34.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
34.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
34.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
34.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
34.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
34.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
34.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
34.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
34.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
34.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
34.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
34.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
34.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
33.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
33.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
33.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
33.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
33.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
33.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
33.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
33.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
33.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
33.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
33.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
33.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
33.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
32.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
32.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
32.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
32.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
32.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
32.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
32.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
32.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
32.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
32.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
32.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
32.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
31.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
31.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
31.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
31.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
31.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
31.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
31.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
31.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
31.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
31.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
31.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
31.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
31.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
31.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
31.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
31.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
31.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
30.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
30.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
30.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
30.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
30.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
30.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
30.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
30.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
30.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
30.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
30.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
30.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
30.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
30.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
29.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
29.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
29.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
29.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
29.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
29.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
29.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
29.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
29.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
29.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
29.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
29.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
29.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
29.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
29.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
29.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
29.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
29.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
28.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
28.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
28.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
28.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
28.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
28.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
28.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
28.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
28.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
28.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
28.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
28.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
28.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
28.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
28.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
28.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
28.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
28.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
28.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
27.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
27.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
27.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
27.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
27.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
27.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
27.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
27.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
27.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
27.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
27.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
27.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
27.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
27.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
27.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
27.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
27.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
27.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
26.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
26.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
26.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
26.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
26.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
26.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
26.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
26.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
26.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
26.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
26.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
26.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
26.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
26.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
26.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
26.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
26.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
26.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
26.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
26.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
25.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
25.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
25.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
25.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
25.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
25.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
25.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
25.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
25.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
25.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
25.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
25.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
25.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
25.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
25.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
25.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
25.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
25.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
25.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
25.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
25.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
25.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
25.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
25.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
25.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
25.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
24.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
24.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
24.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
24.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
24.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
24.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
24.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
24.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
24.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
24.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
24.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
24.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
24.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
24.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
24.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
24.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
24.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
24.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
24.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
23.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
23.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
23.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
23.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
23.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
23.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
23.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
23.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
23.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
23.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
23.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
23.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
23.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
23.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
23.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
23.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
23.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
23.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
23.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
23.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
23.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
23.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
22.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
22.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
22.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
22.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
22.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
22.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
22.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
22.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
22.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
22.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
22.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
22.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
22.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
22.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
22.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
22.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
22.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
22.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
22.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
22.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
22.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
22.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
22.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
21.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
21.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
21.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
21.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
21.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
21.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
21.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
21.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
21.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
21.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
21.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
21.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
21.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
21.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
21.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
21.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
21.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
21.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
21.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
20.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
20.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
20.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
20.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
20.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
20.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
20.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
20.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
20.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
20.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
20.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
20.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
20.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
20.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
19.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
19.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
19.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
19.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
19.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
19.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
19.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
19.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
19.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
19.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
19.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
19.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
19.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
19.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
19.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
19.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
19.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
18.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
18.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
18.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
18.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
18.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
18.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
18.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
18.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
18.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
18.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
18.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
18.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
18.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
18.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
18.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
18.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
18.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
18.1
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
18.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
18.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
17.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
17.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
17.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
17.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
17.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
17.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
17.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
17.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
17.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
17.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
17.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
17.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
16.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
16.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
16.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
16.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
16.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
16.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
16.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
16.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
16.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
16.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
15.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
15.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
15.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
15.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
15.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
15.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
15.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
15.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
15.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
15.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
15.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
15.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
14.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
14.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
14.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
14.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
14.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
14.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
14.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
14.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
14.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
14.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
13.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
13.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
13.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
13.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
13.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
13.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
13.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
13.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
13.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
12.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
12.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
12.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
12.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
12.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
12.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
11.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
11.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
11.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
11.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
11.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
8.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CYREN is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
100.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
66.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
65.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
65.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
61.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
58.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
57.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
57.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
57.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
56.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
56.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
55.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
53.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
52.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
51.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
49.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
48.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
47.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
47.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
46.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
46.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
45.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
44.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
44.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
44.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
42.6
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
42.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
42.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
42.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
42.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
42.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
41.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
40.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
40.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
40.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
40.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
40.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
39.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
39.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
38.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
37.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
36.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
36.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
36.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
36.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
36.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
36.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
35.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
35.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
35.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
34.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
32.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
31.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
31.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
31.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
30.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
30.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
30.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
30.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
29.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
29.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
29.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
29.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
28.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
28.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
28.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
28.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
27.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
27.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
27.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
27.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
26.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
26.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
26.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
25.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
25.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
25.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
24.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
24.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
24.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
23.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
23.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
23.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
22.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
22.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
21.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
21.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
21.5
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
20.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
20.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
19.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
19.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
18.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
17.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
16.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
15.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CYREN is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
149.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
121.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
120.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
118.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
111.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
110.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
110.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
106.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
99.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
98.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
98.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
91.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
90.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
89.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
87.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
84.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
81.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
80.9
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
80.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
79.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
78.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
77.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
77.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
76.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
75.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
73.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
73.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
73.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
72.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
72.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
71.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
68.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
68.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
66.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
65.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
65.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
65.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
64.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
63.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
63.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
63.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
62.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
62.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
62.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
61.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
61.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
61.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
61.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
60.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
60.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
60.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
59.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
59.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
58.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
58.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
58.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
56.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
55.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
55.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
55.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
55.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
55.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
55.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
54.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
54.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
54.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
53.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
53.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
52.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
52.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
52.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
52.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
52.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
51.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
50.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
50.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
50.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
50.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
49.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
49.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
49.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
49.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
48.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
48.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
48.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
48.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
48.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
48.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
47.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
47.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
46.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
45.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
45.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
45.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
44.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
44.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
44.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
44.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
43.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
43.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
43.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
43.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
43.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
43.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
42.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
42.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
42.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
42.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
41.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
41.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
41.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
41.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
40.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
40.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
40.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
40.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
40.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
39.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
39.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
38.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
38.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
38.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
38.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
38.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
38.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
38.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
38.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
37.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
37.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
37.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
36.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
36.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
36.8
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
36.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
36.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
36.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
35.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
35.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
35.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
35.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
35.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
35.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
35.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
35.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
34.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
34.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
34.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
34.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
34.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
34.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
34.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
33.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
33.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
33.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
33.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
32.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
32.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
32.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
32.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
32.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
32.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
31.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
31.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
31.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
31.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
31.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
31.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
31.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
31.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
30.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
30.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
30.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
30.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
30.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
30.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
30.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
30.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
29.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
29.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
29.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
29.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
29.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
29.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
29.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
29.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
28.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
28.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
28.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
28.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
28.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
27.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
27.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
27.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
27.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
27.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
27.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
27.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
27.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
26.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
26.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
26.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
26.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
26.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
26.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
26.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
26.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
26.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
25.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
25.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
25.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
25.1
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
25.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
24.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
24.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
24.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
24.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
24.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
24.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
23.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
23.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
23.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
22.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
22.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
22.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
22.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
22.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
22.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
22.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
22.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
21.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
21.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
21.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
21.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
21.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
20.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
20.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
19.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
19.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
18.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
18.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
18.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
18.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
18.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
17.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
17.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
17.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
17.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
17.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
16.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
16.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
15.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
15.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
15.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
14.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
14.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
14.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
14.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
13.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
13.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
12.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
12.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
12.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.8
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
11.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
11.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
11.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
11.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
10.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
10.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
10.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
9.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
4.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0077310003
Tumor
1.3
CPT0014450004
Tumor
0.9
CPT0000780007
Tumor
0.6
CPT0078800003
Tumor
0.6
CPT0011410003
Tumor
0.6
CPT0014160003
Tumor
0.6
CPT0092290003
Tumor
0.5
CPT0001500009
Tumor
0.5
CPT0079380003
Tumor
0.5
CPT0001220008
Tumor
0.4
CPT0086950003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0066480003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0014470001
Normal
0.3
CPT0019130003
Tumor
0.3
CPT0087040003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0079410003
Tumor
0.2
CPT0025350003
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0063640001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0014370004
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0065450001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0079430001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0002370001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0088640003
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0025110003
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0078940001
Normal
-0.2
CPT0088550004
Tumor
-0.2
CPT0092800003
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0019160001
Normal
-0.2
CPT0092190003
Normal
-0.2
CPT0025170003
Tumor
-0.3
CPT0092310003
Normal
-0.3
CPT0092730003
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0065820001
Normal
-0.3
CPT0023350003
Tumor
-0.3
CPT0081880003
Tumor
-0.4
CPT0025060001
Normal
-0.4
CPT0077320001
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0069160003
Tumor
-0.4
CPT0086360003
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0089480003
Normal
-0.5
CPT0002270011
Tumor
-0.5
CPT0015810003
Tumor
-0.5
CPT0025290003
Tumor
-0.5
CPT0025230003
Tumor
-0.5
CPT0065690003
Tumor
-0.8
CPT0015730003
Tumor
-0.9
CPT0026410003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0007870001
Normal
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0020120003
Tumor
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0001340003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0001270001
Normal
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077490003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0069000003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0007470001
Normal
N/A
CPT0077110003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0007320003
Tumor
N/A
CPT0076350001
Normal
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0075560003
Tumor
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0065870003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0075130003
Tumor
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
