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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PMS2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
34.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
25.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
19.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
17.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
16.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
14.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
14.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
13.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
12.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
12.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
12.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
12.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
11.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
11.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
11.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
11.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
11.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
11.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
11.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
10.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
10.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
10.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
10.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
9.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
9.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
9.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
9.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
8.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
8.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
8.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
7.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
7.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
7.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
7.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
7.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
6.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
6.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
6.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
5.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
4.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
4.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
4.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
4.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
4.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
3.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
3.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
3.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
3.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
3.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
2.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
1.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PMS2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
23.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
23.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
22.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
21.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
20.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
19.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
19.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
19.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
18.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
18.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
18.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
17.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
16.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
16.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
16.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
16.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
16.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
15.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
15.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
15.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
15.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
14.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
14.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
14.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
14.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
14.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
14.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
14.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
14.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
14.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
14.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
14.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
14.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
14.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
14.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
14.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
14.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
14.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
14.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
13.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
13.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
13.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
13.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
13.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
13.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
13.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
13.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
13.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
13.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
13.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
13.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
13.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
13.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
13.1
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
13.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
12.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
12.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
12.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
12.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
12.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
12.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
12.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
12.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
12.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
12.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
12.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
12.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
12.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
12.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
12.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
12.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
12.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
12.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
12.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
12.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
12.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
12.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
12.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
12.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
12.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
12.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
12.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
11.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
11.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
11.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
11.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
11.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
11.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
11.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
11.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
11.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
11.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
11.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
11.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
11.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
11.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
11.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
11.5
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
11.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
11.4
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
11.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
11.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
11.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
11.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
11.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
11.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
11.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
11.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
11.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
11.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
11.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
10.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
10.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
10.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
10.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
10.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
10.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
10.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
10.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
10.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
10.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
10.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
10.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
10.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
10.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
10.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
10.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
10.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
10.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
10.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
10.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
10.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
10.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
10.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
10.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
10.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
10.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
10.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
10.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
10.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
10.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
10.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
10.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
10.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
10.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
10.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
10.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
10.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
10.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
10.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
10.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
10.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
10.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
10.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
10.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
10.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
10.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
9.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
9.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
9.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
9.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
9.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
9.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
9.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
9.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
9.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
9.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
9.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
9.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
9.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
9.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
9.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
9.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
9.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
9.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
9.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
9.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
9.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
9.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
9.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
9.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
9.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
9.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
9.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
9.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
9.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
9.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
9.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
9.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
9.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
9.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
9.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
9.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
9.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
9.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
9.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
9.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
9.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
9.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
8.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
8.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
8.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
8.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
8.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
8.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
8.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
8.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
8.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
8.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
8.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
8.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
8.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
8.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
8.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
8.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
8.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
8.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
8.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
8.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
8.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
8.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
8.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
8.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
8.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
8.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
8.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
8.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
8.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
8.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
8.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
8.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
8.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
8.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
8.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
8.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
8.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
8.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
8.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
8.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
8.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
8.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
8.1
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
8.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
8.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
8.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
8.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
8.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
8.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
8.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
8.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
8.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
7.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
7.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
7.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
7.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
7.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
7.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
7.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
7.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
7.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
7.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
7.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
7.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
7.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
7.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
7.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
7.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
7.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
7.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
7.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
7.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
7.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
7.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
7.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
7.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
7.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
7.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
7.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
7.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
7.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
7.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
7.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
7.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
7.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
7.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
7.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
7.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
7.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
7.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
7.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
7.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
7.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
7.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
7.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
7.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
7.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
7.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
6.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
6.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
6.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
6.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
6.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
6.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
6.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
6.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
6.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
6.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
6.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
6.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
6.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
6.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
6.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
6.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
6.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
6.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
6.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
6.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
6.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
6.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
6.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
6.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
6.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
6.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
6.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
6.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
6.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
6.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
6.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
6.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
6.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
6.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
6.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
6.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
6.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
6.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
6.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
6.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
6.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
6.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
6.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
6.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
6.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
6.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
6.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
6.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
6.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
6.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
6.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
6.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
6.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
5.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
5.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
5.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
5.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
5.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
5.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
5.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
5.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
5.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
5.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
5.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
5.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
5.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
5.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
5.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
5.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
5.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
5.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
5.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
5.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
5.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
5.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
5.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
5.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
5.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
5.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
5.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
4.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
4.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
4.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
4.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
4.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
4.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
4.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
4.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
4.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
4.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
4.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
4.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
4.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
4.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
4.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
4.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
4.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
4.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
4.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
4.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
4.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
4.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
4.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
4.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
4.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
4.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
4.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
4.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
4.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
4.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
4.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
4.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
4.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
4.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
4.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
4.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
3.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
3.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
3.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
3.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
3.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
3.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
3.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
3.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
3.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
3.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
2.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
2.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
2.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
2.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PMS2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
33.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
22.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
20.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
18.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
18.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
18.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
17.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
17.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.1
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
16.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
16.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
15.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
15.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
14.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
14.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
14.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
14.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
14.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
14.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
13.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
13.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
13.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
13.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
12.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
12.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
12.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
12.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
12.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
12.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
12.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
11.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
11.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
11.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
11.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
11.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
11.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
11.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
10.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
10.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
10.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
10.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
10.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
10.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
10.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
10.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
10.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
10.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
9.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
9.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
9.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
9.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
9.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
9.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
8.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
8.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
8.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
8.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
8.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
8.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
8.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
8.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
8.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
8.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
7.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
7.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
7.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
7.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
7.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
7.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
7.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
7.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
7.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
7.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
7.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
6.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
6.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
6.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
6.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
5.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
5.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
5.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
5.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
5.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
5.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PMS2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
37.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
32.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
31.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
30.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
28.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
27.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
27.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
26.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
26.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
26.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
26.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
25.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
25.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
25.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
24.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
24.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
23.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
23.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
23.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
22.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
21.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
20.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
20.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
20.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
20.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
20.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
20.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
19.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
19.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
18.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
18.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
18.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
18.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
18.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
18.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
17.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
17.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
17.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
17.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
17.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
17.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
17.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
16.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
16.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
16.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
16.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
16.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
16.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
16.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
16.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
16.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
16.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
15.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
15.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
15.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
15.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
15.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
15.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
15.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
14.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
14.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
14.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
14.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
14.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
14.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
14.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
14.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
14.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
13.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
13.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
13.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
13.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
13.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
13.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
13.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
13.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
13.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
13.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
13.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
13.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
13.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
12.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
12.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
12.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
12.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
12.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
12.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
12.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
12.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
12.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
12.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
12.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
12.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
12.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
12.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
12.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
11.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
11.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
11.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
11.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
11.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
11.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
11.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
11.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
11.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
11.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
11.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
11.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
11.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
11.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
11.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
10.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
10.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
10.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
10.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
10.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
10.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
10.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
10.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
10.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
10.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
10.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
10.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
10.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
10.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
9.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
9.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
9.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
9.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
9.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
9.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
9.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
9.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
9.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
9.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
9.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
9.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
9.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
9.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
8.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
8.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
8.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
8.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
8.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
8.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
8.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
8.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
8.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
8.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
8.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
8.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
7.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
7.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
7.8
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
7.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
7.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
7.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
7.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
7.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
7.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
7.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
7.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
7.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
7.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
7.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
7.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
6.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
6.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
6.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
6.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
6.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
6.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
6.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
6.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
6.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
6.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
6.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
6.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
6.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
6.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
6.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
5.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
5.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
5.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
5.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
5.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
5.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
5.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
5.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
5.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
4.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
4.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
4.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
4.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
4.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
4.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
3.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
3.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
3.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
3.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
3.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
3.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
2.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
2.8
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
2.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
2.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
2.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
2.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
2.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
2.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
1.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
1.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
1.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0011410003
Tumor
1.4
CPT0014450004
Tumor
0.8
CPT0009060003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0078800003
Tumor
0.4
CPT0009080003
Normal
0.4
CPT0079430001
Normal
0.4
CPT0020120003
Tumor
0.4
CPT0079180003
Tumor
0.4
CPT0086950003
Tumor
0.3
CPT0087050003
Normal
0.3
CPT0012090003
Normal
0.3
CPT0078530001
Normal
0.3
CPT0025050003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0012770003
Normal
0.2
CPT0014130001
Normal
0.2
CPT0012180003
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0018250001
Normal
0.2
CPT0002270011
Tumor
0.2
CPT0009020003
Normal
0.2
CPT0078940001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0078660003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0001340003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0092740003
Normal
0.2
CPT0017450001
Normal
0.2
CPT0066470004
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0089460004
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0000780007
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0081880003
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0065450001
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0092800003
Normal
0.1
CPT0007470001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0063640001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0089040001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0089480003
Normal
0.1
CPT0082010001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0007870001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0084590001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0075570001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0084560003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0065820001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0006950001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0066480003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0092160003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0069000003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0081600003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0088970003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0065430003
Tumor
-0.1
CPT0012550003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0078510003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0017410003
Tumor
-0.1
CPT0007860003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0025230003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0075170001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0009000003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0012080003
Tumor
-0.1
CPT0025350003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0079270003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0063630003
Tumor
-0.2
CPT0088480003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0088900003
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0001540009
Tumor
-0.3
CPT0086870003
Tumor
-0.3
CPT0092730003
Tumor
-0.3
CPT0014370004
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0088630003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0092190003
Normal
-0.3
CPT0026410003
Tumor
-0.4
CPT0076330003
Tumor
-0.4
CPT0088550004
Tumor
-0.4
CPT0088690003
Tumor
-0.4
CPT0078990003
Tumor
-0.4
CPT0001180009
Tumor
-0.5
CPT0023350003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
