HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:36.4 nTPM
HPA Brain:50.4 nTPM
GTEx:36.4 nTPM
FANTOM5:81.1 Scaled Tags Per Million
Pig:73.7 nTPM
Mouse:93.0 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040916
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 50.4
Sample id Sample description nTPM
Hippocampus
nTPM: 46.2
2148 Female, age 91, left hemisphere 49.1
1898 Male, age 80, left hemisphere 46.0
1855 Male, age 76, left hemisphere 45.8
1911 Female, age 85, right hemisphere 45.8
2621 Female, age 67, right hemisphere 45.7
2529 Female, age 94, left hemisphere 45.1
Dentate gyrus
nTPM: 47.3
2531 Female, age 67, both hemispheres 56.6
1927 Female, age 91, both hemispheres 48.4
2530 Female, age 94, left hemisphere 46.1
2246 Female, age 85, both hemispheres 45.7
2528 Male, age 74, both hemispheres 43.7
2010 Male, age 76, both hemispheres 43.5
Entorhinal gyrus
nTPM: 41.7
2686 Male, age 75, right hemisphere 43.5
1787 Male, age 76, left hemisphere 43.4
2613 Female, age 94, left hemisphere 43.3
2764 Male, age 80, right hemisphere 42.2
2117 Female, age 91, right hemisphere 41.0
1938 Female, age 85, left hemisphere 36.9
Hippocampus, CA1
nTPM: 47.3
2749 Male, age 80, left hemisphere 55.9
2045 Male, age 76, both hemispheres 50.7
2082 Female, age 91, right hemisphere 44.1
1873 Female, age 85, both hemispheres 43.3
2527 Male, age 74, both hemispheres 42.2
Hippocampus, CA2
nTPM: 43.0
1963 Male, age 80, left hemisphere 50.4
2437 Female, age 94, left hemisphere 44.1
1892 Male, age 76, both hemispheres 44.0
2113 Female, age 91, right hemisphere 41.0
1940 Female, age 85, left hemisphere 40.7
2249 Male, age 74, both hemispheres 37.8
Hippocampus, CA3
nTPM: 50.4
2861 Female, age 67, both hemispheres 63.6
2620 Female, age 94, left hemisphere 62.1
2137 Male, age 80, left hemisphere 56.3
1867 Male, age 76, both hemispheres 45.4
1891 Female, age 85, both hemispheres 39.6
2436 Male, age 74, both hemispheres 35.3
Parahippocampal cortex
nTPM: 39.4
2622 Female, age 67, right hemisphere 44.8
2018 Male, age 76, both hemispheres 41.6
2693 Female, age 94, both hemispheres 40.6
2245 Female, age 91, both hemispheres 40.1
2692 Male, age 74, both hemispheres 39.6
2250 Female, age 67, right hemisphere 39.5
1990 Female, age 91, right hemisphere 39.0
2532 Female, age 72, left hemisphere 37.2
1850 Male, age 80, both hemispheres 36.0
1933 Female, age 85, both hemispheres 35.8
Perirhinal gyrus
nTPM: 39.0
2521 Female, age 94, right hemisphere 41.8
1794 Male, age 80, right hemisphere 40.2
1847 Female, age 91, left hemisphere 39.3
2848 Male, age 76, right hemisphere 38.2
1841 Female, age 85, right hemisphere 35.6
Subiculum
nTPM: 41.2
2619 Male, age 74, both hemispheres 45.9
2729 Female, age 91, right hemisphere 44.5
1901 Male, age 80, both hemispheres 43.8
2042 Male, age 76, both hemispheres 41.0
1977 Female, age 85, both hemispheres 38.7
2438 Female, age 94, left hemisphere 33.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 36.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.4
Samples: 197

Max nTPM: 75.4
Min nTPM: 16.4
Std nTPM: 8.1
Median nTPM: 35.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 75.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 60.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 55.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 54.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 54.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 53.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 52.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 52.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 51.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 51.0
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 49.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 81.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 81.1
FF:10169-103B7 60 years, female 92.4
FF:10153-102I9 76 years, female 69.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 73.7
Pig sample Sample description nTPM
Subiculum
nTPM: 62.8
Samples: 4

Max nTPM: 76.0
Min nTPM: 57.0
Sample A Female 76.0
Sample B Female 57.0
Sample C Male 60.6
Sample D Male 57.4
Dorsal hippocampus
nTPM: 62.8
Samples: 4

Max nTPM: 71.4
Min nTPM: 55.8
Sample A Female 71.4
Sample B Female 64.1
Sample C Male 59.8
Sample D Male 55.8
Entorhinal cortex
nTPM: 73.7
Samples: 4

Max nTPM: 83.8
Min nTPM: 66.1
Sample A Female 83.8
Sample B Female 68.6
Sample C Male 76.2
Sample D Male 66.1
Ventral hippocampus
nTPM: 62.3
Samples: 4

Max nTPM: 78.3
Min nTPM: 47.7
Sample A Female 58.1
Sample B Female 47.7
Sample C Male 78.3
Sample D Male 65.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 93.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 93.0
Samples: 4

Max nTPM: 100.0
Min nTPM: 88.7
Sample A Male 91.9
Sample B Male 91.4
Sample C Female 88.7
Sample D Female 100.0
Hippocampal formation
nTPM: 73.2
Samples: 4

Max nTPM: 78.1
Min nTPM: 68.3
Sample A Male 78.1
Sample B Male 68.3
Sample C Female 70.9
Sample D Female 75.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
67979034 Antisense, RP_040923_02_B04, Mouse strain C57BL/6J (56 days, male) 2.6

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