HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:116.6 nTPM
HPA Brain:165.8 nTPM
GTEx:116.6 nTPM
FANTOM5:206.4 Scaled Tags Per Million
Pig:75.5 nTPM
Mouse:186.8 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009025Antibody HPA024565
Glial cells HighLow
Neuronal cells MediumNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 165.8
Sample id Sample description nTPM
Hippocampus
nTPM: 131.4
1898 Male, age 80, left hemisphere 156.8
2621 Female, age 67, right hemisphere 139.4
2529 Female, age 94, left hemisphere 136.5
1855 Male, age 76, left hemisphere 132.1
2148 Female, age 91, left hemisphere 114.2
1911 Female, age 85, right hemisphere 109.2
Dentate gyrus
nTPM: 120.9
2010 Male, age 76, both hemispheres 168.4
2530 Female, age 94, left hemisphere 143.9
2528 Male, age 74, both hemispheres 126.4
1927 Female, age 91, both hemispheres 112.5
2246 Female, age 85, both hemispheres 99.0
2531 Female, age 67, both hemispheres 75.1
Entorhinal gyrus
nTPM: 108.8
2117 Female, age 91, right hemisphere 119.3
2764 Male, age 80, right hemisphere 118.8
1938 Female, age 85, left hemisphere 118.1
2686 Male, age 75, right hemisphere 102.2
1787 Male, age 76, left hemisphere 99.9
2613 Female, age 94, left hemisphere 94.4
Hippocampus, CA1
nTPM: 165.8
2749 Male, age 80, left hemisphere 316.9
1873 Female, age 85, both hemispheres 175.4
2527 Male, age 74, both hemispheres 139.7
2082 Female, age 91, right hemisphere 111.2
2045 Male, age 76, both hemispheres 85.5
Hippocampus, CA2
nTPM: 131.4
1963 Male, age 80, left hemisphere 234.9
2249 Male, age 74, both hemispheres 137.6
2113 Female, age 91, right hemisphere 117.0
1892 Male, age 76, both hemispheres 116.6
2437 Female, age 94, left hemisphere 99.8
1940 Female, age 85, left hemisphere 82.7
Hippocampus, CA3
nTPM: 112.3
2436 Male, age 74, both hemispheres 153.9
2137 Male, age 80, left hemisphere 141.6
2861 Female, age 67, both hemispheres 106.9
1891 Female, age 85, both hemispheres 100.7
1867 Male, age 76, both hemispheres 92.5
2620 Female, age 94, left hemisphere 78.1
Parahippocampal cortex
nTPM: 113.8
1850 Male, age 80, both hemispheres 130.8
2250 Female, age 67, right hemisphere 125.7
1933 Female, age 85, both hemispheres 121.1
2622 Female, age 67, right hemisphere 120.3
2692 Male, age 74, both hemispheres 114.7
2245 Female, age 91, both hemispheres 112.7
2018 Male, age 76, both hemispheres 111.7
1990 Female, age 91, right hemisphere 107.4
2532 Female, age 72, left hemisphere 97.7
2693 Female, age 94, both hemispheres 95.9
Perirhinal gyrus
nTPM: 116.3
1847 Female, age 91, left hemisphere 136.2
1841 Female, age 85, right hemisphere 129.6
1794 Male, age 80, right hemisphere 115.3
2848 Male, age 76, right hemisphere 101.0
2521 Female, age 94, right hemisphere 99.5
Subiculum
nTPM: 108.7
2619 Male, age 74, both hemispheres 125.1
2729 Female, age 91, right hemisphere 115.9
1977 Female, age 85, both hemispheres 106.0
1901 Male, age 80, both hemispheres 103.7
2042 Male, age 76, both hemispheres 103.7
2438 Female, age 94, left hemisphere 98.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 116.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 116.6
Samples: 197

Max nTPM: 229.7
Min nTPM: 36.5
Std nTPM: 38.3
Median nTPM: 112.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 229.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 229.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 221.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 211.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 210.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 202.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 194.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 189.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 189.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 187.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 185.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 206.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 206.4
FF:10169-103B7 60 years, female 262.7
FF:10153-102I9 76 years, female 150.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 75.5
Pig sample Sample description nTPM
Subiculum
nTPM: 57.1
Samples: 4

Max nTPM: 64.5
Min nTPM: 49.3
Sample A Female 64.5
Sample B Female 58.3
Sample C Male 56.3
Sample D Male 49.3
Dorsal hippocampus
nTPM: 75.5
Samples: 4

Max nTPM: 100.8
Min nTPM: 65.2
Sample A Female 100.8
Sample B Female 68.1
Sample C Male 68.0
Sample D Male 65.2
Entorhinal cortex
nTPM: 51.2
Samples: 4

Max nTPM: 60.5
Min nTPM: 43.8
Sample A Female 49.5
Sample B Female 60.5
Sample C Male 51.1
Sample D Male 43.8
Ventral hippocampus
nTPM: 65.9
Samples: 4

Max nTPM: 73.9
Min nTPM: 50.1
Sample A Female 73.9
Sample B Female 50.1
Sample C Male 68.3
Sample D Male 71.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 186.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 171.8
Samples: 4

Max nTPM: 197.1
Min nTPM: 149.9
Sample A Male 166.4
Sample B Male 149.9
Sample C Female 197.1
Sample D Female 173.9
Hippocampal formation
nTPM: 186.9
Samples: 4

Max nTPM: 199.4
Min nTPM: 174.9
Sample A Male 199.4
Sample B Male 186.3
Sample C Female 174.9
Sample D Female 186.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
69015284 Antisense, RP_050310_02_F07, Mouse strain C57BL/6J (56 days, male) 4.6
70436739 Antisense, RP_050310_02_F07, Mouse strain C57BL/6J (56 days, male) 2.4

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