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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FMOD is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
179.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
66.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
56.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
52.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
51.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
47.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
44.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
39.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
38.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
33.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
31.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
31.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
30.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
28.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
24.8
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
24.4
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
24.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
22.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
22.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
22.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
18.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
18.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
17.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
17.7
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
17.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
16.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
16.5
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
16.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
15.4
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
15.2
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
15.1
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
15.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
14.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
14.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
14.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
13.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
13.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
12.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
12.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
12.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
11.8
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
11.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
11.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
11.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
11.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
11.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
10.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
10.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
10.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
10.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
10.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
10.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
10.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
9.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
9.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
9.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
9.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
9.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
9.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
9.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
8.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
8.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
8.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
8.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
8.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
8.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
8.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
8.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
7.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
7.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
7.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
7.3
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
7.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
7.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
7.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
6.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
6.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
6.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
6.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
6.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
6.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
6.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
6.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
6.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
6.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
5.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
5.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
5.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
5.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
5.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
5.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
5.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
5.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
5.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
5.2
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
5.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
5.1
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
5.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
5.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
5.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
5.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
4.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
4.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
4.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
4.8
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
4.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
4.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
4.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
4.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
4.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
4.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
4.4
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
4.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
4.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
4.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
4.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
4.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
4.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
4.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
3.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
3.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
3.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
3.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
3.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
3.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
3.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
3.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
3.5
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
3.5
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
3.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
3.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
3.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
3.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
3.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
3.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
3.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
3.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
3.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
2.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
2.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
2.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
2.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2.8
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
2.8
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
2.7
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
2.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
2.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.6
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
2.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
2.6
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
2.5
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
2.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
2.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
2.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
2.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
2.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
2.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
2.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
2.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
2.2
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
2.2
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
2.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
2.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
2.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
2.1
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
2.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
2.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
2.0
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
2.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
2.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
1.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
1.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
1.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
1.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
1.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
1.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
1.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
1.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
1.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1.4
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
1.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
1.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
1.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
1.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
1.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
1.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
1.0
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
1.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
1.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
1.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
1.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
1.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
0.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
0.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
0.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
0.9
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
0.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
0.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
0.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
0.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.8
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
0.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
0.8
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
0.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
0.8
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
0.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
0.7
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
0.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
0.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
0.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
0.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
0.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
0.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
0.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
0.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
0.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
0.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
0.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
0.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
0.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
0.6
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
0.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
0.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
0.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
0.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
0.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
0.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
0.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
0.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
0.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
0.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
0.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
0.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
0.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
0.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
0.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
0.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
0.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
0.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
0.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
0.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
0.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
0.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
0.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
0.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
0.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
0.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
0.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
0.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
0.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
0.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
0.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
0.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
0.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
0.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
0.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
0.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
0.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
0.3
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
0.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
0.3
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
0.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
0.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
0.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
0.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
0.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
0.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
0.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
0.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
0.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
0.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
0.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
0.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
0.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
0.1
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
0.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
0.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
0.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
0.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
0.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
0.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
0.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
0.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
0.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
0.0
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
0.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
0.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
0.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
0.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
0.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FMOD is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.2
Number of samples
231
Samples
Sample
Description
TPM
DO23530
0 years, male, NA, stage:4, dead, 180 days
87.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
55.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
46.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
45.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
36.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
35.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
31.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
31.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
31.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
29.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
27.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
25.7
DO45283
0 years, male, NA, stage:3, alive, 510 days
22.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
21.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
20.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
19.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
19.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
18.5
DO48747
0 years, male, NA, stage:3, alive, 540 days
18.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
18.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
18.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
18.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
17.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
15.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
15.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
15.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
15.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
14.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
14.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
13.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
13.5
DO45287
0 years, male, NA, stage:1, alive, 390 days
13.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
12.5
DO23509
0 years, male, NA, stage:3, dead, 780 days
11.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
11.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
11.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
11.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
10.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
10.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
10.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
9.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
9.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
9.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
9.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
9.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
9.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
9.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
9.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
9.0
DO45229
0 years, male, NA, stage:1, alive, 990 days
8.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
8.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
8.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
8.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
8.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
8.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
8.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
8.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
8.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
8.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
7.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
7.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
7.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
7.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
7.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
7.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
7.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
6.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
6.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
6.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
6.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
6.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
6.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
6.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
6.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
5.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
5.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
5.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
5.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
5.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
4.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
4.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
4.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
4.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
4.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
4.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
4.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
3.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
3.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
3.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
3.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
3.5
DO45241
0 years, male, NA, stage:1, alive, 1080 days
3.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
3.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
3.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
3.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
3.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
3.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
3.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
3.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
3.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
3.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
2.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
2.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
2.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
2.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
2.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
2.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
2.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
2.6
DO23538
0 years, male, NA, stage:2, alive, 450 days
2.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
2.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
2.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
2.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
2.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
2.4
DO48730
0 years, female, NA, stage:2, alive, 630 days
2.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
2.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
2.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
2.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
2.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
2.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
1.9
DO45259
0 years, male, NA, stage:3, alive, 330 days
1.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
1.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
1.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
1.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
1.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
1.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
1.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
1.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
1.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
1.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
1.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
1.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
1.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
1.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
1.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
1.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
1.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
1.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
1.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
1.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
1.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
1.0
DO48716
0 years, male, NA, stage:2, alive, 720 days
1.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
1.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
1.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
1.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
1.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
1.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
0.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
0.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
0.8
DO45269
0 years, male, NA, stage:3, alive, 750 days
0.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
0.8
DO48681
0 years, male, NA, stage:2, alive, 900 days
0.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
0.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
0.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
0.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
0.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
0.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
0.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
0.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
0.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
0.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
0.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
0.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
0.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
0.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
0.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
0.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
0.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
0.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
0.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
0.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
0.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
0.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
0.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
0.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
0.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
0.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
0.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
0.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
0.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
0.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
0.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
0.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
0.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
0.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
0.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
0.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
0.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
0.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
0.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
0.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
0.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
0.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
0.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
0.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
0.3
DO45195
0 years, male, NA, stage:1, alive, 390 days
0.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
0.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
0.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
0.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
0.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
0.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
0.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
0.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
0.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
0.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
0.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
0.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
0.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
0.2
DO23534
0 years, male, NA, stage:2, alive, 840 days
0.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
0.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
0.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
0.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
0.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
0.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
0.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
0.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
0.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
0.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
0.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
0.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
0.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
0.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
545
Tumor
1.8
297
Tumor
1.8
455
Tumor
1.8
421
Tumor
1.7
823
Tumor
1.7
311
Tumor
1.7
185
Tumor
1.7
355
Tumor
1.6
671
Tumor
1.6
817
Tumor
1.5
223
Tumor
1.5
883
Tumor
1.5
141
Tumor
1.3
385
Tumor
1.3
921
Tumor
1.2
427
Tumor
1.2
881
Tumor
1.1
982
Normal
1.1
137
Tumor
1.1
975
Tumor
1.1
383
Tumor
1.1
813
Tumor
1.0
917
Tumor
1.0
363
Tumor
1.0
213
Tumor
1.0
697
Tumor
0.9
525
Tumor
0.9
187
Tumor
0.8
535
Tumor
0.8
713
Tumor
0.8
211
Tumor
0.7
277
Tumor
0.6
161
Tumor
0.6
375
Tumor
0.6
877
Tumor
0.6
331
Tumor
0.6
192
Normal
0.5
433
Tumor
0.5
536
Normal
0.5
447
Tumor
0.5
943
Tumor
0.5
343
Tumor
0.5
387
Tumor
0.5
224
Normal
0.5
444
Normal
0.5
135
Tumor
0.5
191
Tumor
0.5
492
Normal
0.4
463
Tumor
0.4
483
Tumor
0.4
425
Tumor
0.4
527
Tumor
0.3
145
Tumor
0.3
857
Tumor
0.3
461
Tumor
0.3
498
Normal
0.2
641
Tumor
0.2
814
Normal
0.2
563
Tumor
0.2
923
Tumor
0.2
785
Tumor
0.2
491
Tumor
0.2
516
Normal
0.2
524
Normal
0.2
958
Normal
0.2
146
Normal
0.1
493
Tumor
0.1
312
Normal
0.1
354
Normal
0.1
365
Tumor
0.1
268
Normal
0.1
567
Tumor
0.1
916
Normal
0.1
448
Normal
0.1
313
Tumor
0.0
852
Normal
0.0
1028
Normal
0.0
195
Tumor
0.0
672
Normal
0.0
386
Normal
0.0
983
Tumor
0.0
384
Normal
0.0
352
Normal
0.0
968
Normal
0.0
434
Normal
-0.1
816
Normal
-0.1
353
Tumor
-0.1
1045
Tumor
-0.1
963
Tumor
-0.1
818
Normal
-0.1
138
Normal
-0.1
497
Tumor
-0.1
361
Tumor
-0.1
424
Normal
-0.1
976
Normal
-0.1
664
Normal
-0.1
665
Tumor
-0.1
196
Normal
-0.2
1044
Normal
-0.2
467
Tumor
-0.2
1015
Tumor
-0.2
414
Normal
-0.2
217
Tumor
-0.2
395
Tumor
-0.2
214
Normal
-0.2
298
Normal
-0.2
364
Normal
-0.2
314
Normal
-0.2
188
Normal
-0.2
344
Normal
-0.2
515
Tumor
-0.2
428
Normal
-0.2
126
Normal
-0.2
426
Normal
-0.2
874
Normal
-0.3
186
Normal
-0.3
368
Normal
-0.3
571
Tumor
-0.3
341
Tumor
-0.3
446
Normal
-0.3
474
Normal
-0.3
332
Normal
-0.3
218
Normal
-0.3
388
Normal
-0.3
394
Normal
-0.3
538
Normal
-0.4
222
Normal
-0.4
413
Tumor
-0.4
148
Normal
-0.4
744
Normal
-0.4
422
Normal
-0.4
882
Normal
-0.4
953
Tumor
-0.4
698
Normal
-0.4
136
Normal
-0.4
284
Normal
-0.4
432
Normal
-0.4
546
Normal
-0.4
574
Normal
-0.4
278
Normal
-0.4
327
Tumor
-0.4
884
Normal
-0.4
412
Normal
-0.4
1046
Normal
-0.4
528
Normal
-0.4
647
Tumor
-0.4
396
Normal
-0.5
416
Normal
-0.5
858
Normal
-0.5
142
Normal
-0.5
286
Normal
-0.5
572
Normal
-0.5
478
Normal
-0.5
742
Normal
-0.5
132
Normal
-0.5
415
Tumor
-0.5
666
Normal
-0.5
127
Tumor
-0.5
1016
Normal
-0.5
922
Normal
-0.5
488
Normal
-0.5
554
Normal
-0.5
952
Normal
-0.5
824
Normal
-0.5
627
Tumor
-0.5
228
Normal
-0.5
746
Normal
-0.5
356
Normal
-0.6
716
Normal
-0.6
867
Tumor
-0.6
514
Normal
-0.6
715
Tumor
-0.6
162
Normal
-0.6
328
Normal
-0.6
956
Normal
-0.6
392
Normal
-0.6
366
Normal
-0.6
517
Tumor
-0.6
662
Normal
-0.6
362
Normal
-0.6
721
Tumor
-0.6
964
Normal
-0.6
558
Normal
-0.6
172
Normal
-0.6
494
Normal
-0.6
648
Normal
-0.6
912
Normal
-0.6
924
Normal
-0.6
738
Normal
-0.6
472
Normal
-0.7
1014
Normal
-0.7
456
Normal
-0.7
878
Normal
-0.7
436
Normal
-0.7
1026
Normal
-0.7
696
Normal
-0.7
984
Normal
-0.7
534
Normal
-0.7
642
Normal
-0.7
431
Tumor
-0.7
526
Normal
-0.7
124
Normal
-0.7
464
Normal
-0.7
423
Tumor
-0.7
468
Normal
-0.7
786
Normal
-0.7
221
Tumor
-0.7
616
Normal
-0.7
1032
Normal
-0.7
863
Tumor
-0.8
714
Normal
-0.8
518
Normal
-0.8
573
Tumor
-0.8
926
Normal
-0.8
342
Normal
-0.8
462
Normal
-0.8
722
Normal
-0.8
918
Normal
-0.8
376
Normal
-0.8
452
Normal
-0.8
358
Normal
-0.8
484
Normal
-0.9
978
Normal
-0.9
866
Normal
-0.9
944
Normal
-0.9
391
Tumor
-0.9
778
Normal
-0.9
513
Tumor
-0.9
914
Normal
-0.9
564
Normal
-0.9
466
Normal
-0.9
954
Normal
-0.9
111
Normal
-0.9
815
Tumor
-0.9
938
Normal
-0.9
618
Normal
-0.9
393
Tumor
-0.9
537
Tumor
-1.0
351
Tumor
-1.0
661
Tumor
-1.0
471
Tumor
-1.0
445
Tumor
-1.0
756
Normal
-1.0
1043
Tumor
-1.0
868
Normal
-1.0
628
Normal
-1.0
568
Normal
-1.0
724
Normal
-1.0
741
Tumor
-1.0
367
Tumor
-1.0
482
Normal
-1.0
615
Tumor
-1.0
262
Normal
-1.0
913
Tumor
-1.0
258
Normal
-1.1
745
Tumor
-1.1
443
Tumor
-1.1
966
Normal
-1.1
727
Tumor
-1.1
723
Tumor
-1.1
473
Tumor
-1.1
147
Tumor
-1.1
272
Normal
-1.1
686
Normal
-1.1
212
Normal
-1.1
663
Tumor
-1.1
285
Tumor
-1.1
171
Tumor
-1.1
232
Normal
-1.2
283
Tumor
-1.2
967
Tumor
-1.2
981
Tumor
-1.2
357
Tumor
-1.2
1022
Normal
-1.2
1042
Normal
-1.2
523
Tumor
-1.2
862
Normal
-1.2
728
Normal
-1.2
131
Tumor
-1.2
114
Normal
-1.2
777
Tumor
-1.2
465
Tumor
-1.3
695
Tumor
-1.3
227
Tumor
-1.3
743
Tumor
-1.3
864
Normal
-1.3
755
Tumor
-1.3
925
Tumor
-1.3
557
Tumor
-1.3
636
Normal
-1.4
861
Tumor
-1.4
685
Tumor
-1.4
977
Tumor
-1.4
231
Tumor
-1.4
737
Tumor
-1.4
851
Tumor
-1.4
435
Tumor
-1.4
451
Tumor
-1.4
128
Normal
-1.5
955
Tumor
-1.5
481
Tumor
-1.5
553
Tumor
-1.5
617
Tumor
-1.5
533
Tumor
-1.5
911
Tumor
-1.5
411
Tumor
-1.6
487
Tumor
-1.6
915
Tumor
-1.6
257
Tumor
-1.6
477
Tumor
-1.7
1013
Tumor
-1.7
937
Tumor
-1.7
125
Tumor
-1.7
965
Tumor
-1.7
873
Tumor
-1.7
113
Tumor
-1.8
957
Tumor
-1.8
112
Tumor
-1.8
271
Tumor
-1.9
261
Tumor
-1.9
1027
Tumor
-2.0
951
Tumor
-2.0
1025
Tumor
-2.1
1041
Tumor
-2.1
635
Tumor
-2.2
865
Tumor
-2.3
267
Tumor
-2.3
1031
Tumor
-2.4
123
Tumor
-2.4
1021
Tumor
-2.6
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.