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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
36.4
nTPM
HPA Brain:
17.1
nTPM
GTEx:
36.4
nTPM
FANTOM5:
50.5
Scaled Tags Per Million
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
17.1
Sample id
Sample description
nTPM
Amygdala nTPM: 16.8
2695
Female, age 67, right hemisphere
22.9
2514
Male, age 75, right hemisphere
17.4
2814
Male, age 76, right hemisphere
16.7
1987
Female, age 91, left hemisphere
13.6
2517
Female, age 94, left hemisphere
13.2
Basal amygdala nTPM: 15.5
2609
Male, age 75, right hemisphere
19.0
2827
Female, age 67, right hemisphere
16.7
1955
Male, age 76, both hemispheres
16.5
2110
Male, age 80, left hemisphere
14.3
2685
Female, age 94, left hemisphere
13.8
2243
Female, age 91, right hemisphere
12.7
Central amygdala nTPM: 15.5
2826
Female, age 94, left hemisphere
20.1
2515
Male, age 75, right hemisphere
15.1
1905
Male, age 76, both hemispheres
14.8
2239
Male, age 80, left hemisphere
13.7
2701
Female, age 91, right hemisphere
13.7
Corticomedial amygdala nTPM: 15.0
2428
Male, age 75, right hemisphere
16.8
2535
Female, age 67, right hemisphere
15.2
2240
Male, age 76, both hemispheres
15.1
2829
Male, age 80, left hemisphere
14.9
2242
Female, age 91, right hemisphere
14.7
2429
Female, age 94, left hemisphere
13.1
Lateral amygdala nTPM: 17.1
2830
Female, age 67, right hemisphere
22.3
2534
Female, age 94, left hemisphere
19.3
2516
Male, age 75, right hemisphere
18.8
1883
Male, age 76, both hemispheres
14.6
2256
Male, age 80, left hemisphere
14.5
2255
Female, age 91, right hemisphere
13.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
36.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 36.4
Samples: 152
Max nTPM: 77.7
Min nTPM: 19.0
Std nTPM: 9.5
Median nTPM: 34.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
77.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
70.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
67.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
65.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
61.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
59.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
56.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
53.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
53.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
51.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
51.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
50.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
49.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
48.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
47.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
46.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
46.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
46.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
46.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
45.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
45.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
44.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
44.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
44.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
44.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
44.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
44.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
43.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
43.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
42.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
42.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
42.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
41.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
41.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
41.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
41.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
40.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
40.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
40.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
39.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
39.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
39.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
39.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
39.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
39.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
39.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
38.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
38.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
38.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
38.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
37.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
37.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
37.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
37.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
37.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
37.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
37.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
36.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
36.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
36.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
36.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
36.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
36.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
36.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
36.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
35.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
35.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
35.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
35.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
35.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
35.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
34.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
34.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
34.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
34.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
34.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
34.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
34.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
34.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
34.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
34.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
33.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
33.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
33.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
33.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
33.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
33.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
33.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
32.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
32.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
32.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
32.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
32.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
32.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
32.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
32.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
31.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
31.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
31.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
31.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
31.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
31.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
31.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
31.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
31.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
31.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
31.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
30.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
30.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
30.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
30.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
30.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
30.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
30.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
30.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
30.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
29.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
29.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
29.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
29.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
29.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
29.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
29.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
29.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
28.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
28.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
28.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
28.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
28.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
27.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
27.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
27.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
27.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
27.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
27.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
27.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
27.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
26.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
26.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
26.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
25.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
25.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
25.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
25.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
24.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
24.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
24.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
23.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
23.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
23.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
19.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
19.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
