HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:5.4 nTPM
HPA Brain:47.3 nTPM
GTEx:5.4 nTPM
FANTOM5:61.6 Scaled Tags Per Million
Pig:32.5 nTPM
Mouse:28.6 nTPM
Allen mouse:7.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031765
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 47.3
Sample id Sample description nTPM
Hippocampus
nTPM: 45.5
1898 Male, age 80, left hemisphere 49.3
2148 Female, age 91, left hemisphere 46.1
2621 Female, age 67, right hemisphere 46.0
2529 Female, age 94, left hemisphere 44.6
1911 Female, age 85, right hemisphere 43.7
1855 Male, age 76, left hemisphere 43.0
Dentate gyrus
nTPM: 43.5
2531 Female, age 67, both hemispheres 50.1
1927 Female, age 91, both hemispheres 48.7
2010 Male, age 76, both hemispheres 46.6
2246 Female, age 85, both hemispheres 42.2
2530 Female, age 94, left hemisphere 37.4
2528 Male, age 74, both hemispheres 35.8
Entorhinal gyrus
nTPM: 45.8
2613 Female, age 94, left hemisphere 50.5
2686 Male, age 75, right hemisphere 49.9
1938 Female, age 85, left hemisphere 49.4
2764 Male, age 80, right hemisphere 42.7
2117 Female, age 91, right hemisphere 42.4
1787 Male, age 76, left hemisphere 39.9
Hippocampus, CA1
nTPM: 47.3
2749 Male, age 80, left hemisphere 59.4
2045 Male, age 76, both hemispheres 49.2
1873 Female, age 85, both hemispheres 46.3
2527 Male, age 74, both hemispheres 43.7
2082 Female, age 91, right hemisphere 37.6
Hippocampus, CA2
nTPM: 42.5
1963 Male, age 80, left hemisphere 51.5
1892 Male, age 76, both hemispheres 47.6
2437 Female, age 94, left hemisphere 41.7
1940 Female, age 85, left hemisphere 39.0
2113 Female, age 91, right hemisphere 38.2
2249 Male, age 74, both hemispheres 37.2
Hippocampus, CA3
nTPM: 47.1
2137 Male, age 80, left hemisphere 55.0
1867 Male, age 76, both hemispheres 49.6
2620 Female, age 94, left hemisphere 47.8
1891 Female, age 85, both hemispheres 44.7
2436 Male, age 74, both hemispheres 43.4
2861 Female, age 67, both hemispheres 42.2
Parahippocampal cortex
nTPM: 45.5
1850 Male, age 80, both hemispheres 52.9
2693 Female, age 94, both hemispheres 48.9
2692 Male, age 74, both hemispheres 48.0
2532 Female, age 72, left hemisphere 47.8
2622 Female, age 67, right hemisphere 47.2
2245 Female, age 91, both hemispheres 43.6
1933 Female, age 85, both hemispheres 43.0
2018 Male, age 76, both hemispheres 42.6
1990 Female, age 91, right hemisphere 42.0
2250 Female, age 67, right hemisphere 38.7
Perirhinal gyrus
nTPM: 46.4
1841 Female, age 85, right hemisphere 48.6
2521 Female, age 94, right hemisphere 48.0
1794 Male, age 80, right hemisphere 46.4
1847 Female, age 91, left hemisphere 45.1
2848 Male, age 76, right hemisphere 44.2
Subiculum
nTPM: 46.1
2438 Female, age 94, left hemisphere 58.9
1901 Male, age 80, both hemispheres 49.3
1977 Female, age 85, both hemispheres 44.7
2042 Male, age 76, both hemispheres 42.5
2619 Male, age 74, both hemispheres 41.1
2729 Female, age 91, right hemisphere 39.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 5.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.4
Samples: 197

Max nTPM: 10.3
Min nTPM: 3.0
Std nTPM: 1.4
Median nTPM: 5.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 10.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 9.1
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 9.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 9.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 8.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 8.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 8.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 8.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 8.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 8.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 8.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 61.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.6
FF:10169-103B7 60 years, female 71.6
FF:10153-102I9 76 years, female 51.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 32.5
Pig sample Sample description nTPM
Subiculum
nTPM: 29.5
Samples: 4

Max nTPM: 33.0
Min nTPM: 26.2
Sample A Female 33.0
Sample B Female 29.1
Sample C Male 29.6
Sample D Male 26.2
Dorsal hippocampus
nTPM: 32.5
Samples: 4

Max nTPM: 33.7
Min nTPM: 31.3
Sample A Female 33.7
Sample B Female 33.5
Sample C Male 31.6
Sample D Male 31.3
Entorhinal cortex
nTPM: 30.7
Samples: 4

Max nTPM: 32.9
Min nTPM: 28.3
Sample A Female 29.9
Sample B Female 32.9
Sample C Male 31.8
Sample D Male 28.3
Ventral hippocampus
nTPM: 31.5
Samples: 4

Max nTPM: 36.0
Min nTPM: 27.5
Sample A Female 28.7
Sample B Female 27.5
Sample C Male 36.0
Sample D Male 33.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 28.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.0
Samples: 4

Max nTPM: 28.4
Min nTPM: 27.5
Sample A Male 28.2
Sample B Male 27.5
Sample C Female 28.4
Sample D Female 27.7
Hippocampal formation
nTPM: 28.6
Samples: 4

Max nTPM: 30.2
Min nTPM: 26.8
Sample A Male 29.3
Sample B Male 30.2
Sample C Female 28.0
Sample D Female 26.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.5
73925714 Antisense, RP_051214_03_A12, Mouse strain C57BL/6J (56 days, male) 8.3
69290812 Antisense, RP_050407_04_G06, Mouse strain C57BL/6J (56 days, male) 6.6

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