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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CLU is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4967.1
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
21132.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
20038.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
15170.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
15031.2
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
15009.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
14041.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
13953.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
13092.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
12795.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
12659.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
12573.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
12284.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
11874.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
11676.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
11591.9
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
11489.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
11375.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
11145.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
11105.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
11055.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
10976.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
10856.9
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
10803.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
10571.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
10445.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
10370.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
10100.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
10008.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
9926.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
9799.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
9777.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
9762.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
9755.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
9745.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
9616.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
9605.8
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
9541.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
9278.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
8972.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
8948.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
8923.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
8862.0
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
8856.5
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
8791.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8764.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
8748.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
8720.8
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
8662.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8568.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
8547.3
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
8418.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
8415.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
8407.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
8406.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
8355.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8206.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
8087.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8082.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8057.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
8047.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
7883.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7812.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7682.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
7653.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
7649.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
7544.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
7508.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
7471.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
7453.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7405.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
7312.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
7165.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
7134.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
7022.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
6999.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
6980.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6877.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
6813.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6770.1
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
6731.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
6649.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6640.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
6551.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
6504.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
6455.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
6428.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
6401.7
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
6317.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
6298.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
6298.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
6296.5
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
6281.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
6265.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
6255.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
6253.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
6251.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
6212.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
6146.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
6105.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
6092.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
6066.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6045.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
6042.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
6032.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
6008.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
5986.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
5984.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
5963.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
5871.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
5864.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
5831.5
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
5801.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
5750.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
5747.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
5734.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
5729.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
5692.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
5664.8
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5651.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
5651.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
5624.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
5600.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
5577.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
5573.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
5568.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
5560.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
5544.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
5473.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
5460.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
5419.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5392.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
5349.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5345.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5334.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
5327.9
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
5322.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
5253.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
5187.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5176.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
5069.9
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
5063.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
5047.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
5030.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
5023.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
4992.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
4983.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
4909.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
4906.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
4883.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
4876.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
4875.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
4870.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
4866.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
4860.6
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
4806.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
4774.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
4766.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
4755.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
4725.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4689.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
4673.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
4645.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
4632.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
4601.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
4579.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
4534.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
4519.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
4513.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
4494.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
4476.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
4455.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
4403.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
4393.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
4392.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
4377.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
4370.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
4283.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4283.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
4278.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
4215.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4202.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
4186.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
4184.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
4155.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
4140.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
4139.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
4126.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
4121.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
4116.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
4108.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
4100.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
4079.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
4066.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
4057.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
4021.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4009.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
3999.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
3974.2
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
3973.5
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
3967.0
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3939.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
3936.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
3935.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
3934.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
3923.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
3919.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3913.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
3907.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
3895.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
3866.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
3854.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
3839.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
3800.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
3790.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
3788.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
3754.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
3717.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
3717.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
3712.8
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3694.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
3692.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3688.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3685.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
3657.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3603.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
3566.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3523.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
3516.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
3459.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
3432.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
3423.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
3421.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
3411.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
3403.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
3402.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
3396.7
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
3386.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
3324.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
3320.1
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
3298.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3297.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
3271.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
3269.8
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
3268.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
3250.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
3246.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
3207.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
3167.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
3159.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
3111.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
3097.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3090.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3062.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
3027.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
3012.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
3009.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
2960.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
2949.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
2933.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
2920.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
2908.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
2904.8
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
2885.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2832.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
2797.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
2776.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
2764.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
2747.1
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
2740.3
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
2734.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
2731.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2701.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
2698.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
2663.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
2658.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
2646.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
2632.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
2620.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
2585.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
2548.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2533.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
2500.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
2494.4
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
2485.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
2475.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
2439.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
2362.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2362.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
2343.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
2324.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
2303.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
2267.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
2267.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2220.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
2217.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
2215.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
2206.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
2200.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
2162.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2151.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2101.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
2092.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
2089.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
2067.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
2038.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
2036.2
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
2020.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
2007.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
2003.2
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
1993.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
1975.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1964.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
1942.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
1939.2
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1901.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1888.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
1882.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
1870.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1851.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1788.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1743.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1705.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1698.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1693.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1693.4
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
1669.5
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
1659.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
1486.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1483.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
1455.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1432.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
1412.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1401.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1376.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
1375.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1363.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
1345.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
1338.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1294.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
1231.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
1201.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
1139.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1000.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
976.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
970.4
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
922.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
902.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
896.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
875.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
764.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
732.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
722.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
698.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
618.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
592.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
535.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
475.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
262.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
98.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
97.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
70.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CLU is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1176.1
Number of samples
231
Samples
Sample
Description
TPM
DO50808
0 years, male, NA, stage:2, alive, 570 days
4711.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
4210.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
3817.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
3813.6
DO48719
0 years, male, NA, stage:2, alive, 690 days
3393.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
3205.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
3106.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
2681.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
2595.3
DO23512
0 years, male, NA, stage:1, alive, 1260 days
2586.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
2528.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
2512.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
2480.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
2460.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
2452.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
2444.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
2426.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
2422.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
2393.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
2377.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
2334.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
2328.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
2317.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
2281.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
2262.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
2240.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
2226.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
2176.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
2112.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
2038.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
2024.2
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1997.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
1990.2
DO45221
0 years, female, NA, stage:4, dead, 390 days
1988.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
1956.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
1955.2
DO50820
0 years, female, NA, stage:3, alive, 510 days
1950.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
1920.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
1913.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
1907.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
1889.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
1888.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
1857.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
1822.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
1812.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
1783.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
1778.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
1773.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
1768.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
1759.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
1716.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
1695.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
1626.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
1616.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
1588.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
1540.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
1529.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
1516.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
1513.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
1512.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
1488.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
1469.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
1469.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
1458.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
1453.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
1422.3
DO45131
0 years, male, NA, stage:4, dead, 360 days
1420.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
1418.3
DO50787
0 years, male, NA, stage:3, alive, 480 days
1416.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
1398.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
1393.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
1391.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
1388.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
1365.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
1338.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
1337.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
1328.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
1323.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
1320.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
1311.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
1304.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
1300.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
1300.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
1296.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
1294.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
1287.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
1281.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
1270.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
1265.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
1261.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
1244.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
1237.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
1229.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
1225.4
DO23541
0 years, male, NA, stage:2, alive, 930 days
1222.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
1216.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
1199.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
1198.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
1194.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
1188.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
1183.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
1181.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1173.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
1146.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
1145.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
1128.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
1122.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
1096.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
1065.8
DO23529
0 years, male, NA, stage:4, alive, 930 days
1063.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
1059.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
1053.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
1052.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
1040.2
DO45171
0 years, male, NA, stage:3, alive, 600 days
1033.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
1020.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
1016.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
1007.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
999.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
986.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
986.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
985.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
957.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
939.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
929.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
925.0
DO45257
0 years, male, NA, stage:3, alive, 810 days
915.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
915.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
903.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
898.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
891.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
863.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
861.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
860.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
853.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
848.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
847.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
828.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
826.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
819.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
818.5
DO48706
0 years, male, NA, stage:2, alive, 870 days
817.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
816.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
813.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
807.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
806.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
798.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
795.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
794.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
792.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
780.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
766.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
760.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
760.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
755.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
749.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
733.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
730.9
DO45191
0 years, female, NA, stage:2, alive, 1200 days
728.6
DO45165
0 years, male, NA, stage:2, alive, 690 days
704.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
702.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
691.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
682.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
680.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
677.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
674.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
674.4
DO23537
0 years, male, NA, stage:2, dead, 900 days
669.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
664.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
663.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
653.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
652.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
650.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
632.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
620.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
591.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
579.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
574.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
562.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
556.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
555.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
553.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
548.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
541.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
537.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
534.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
531.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
528.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
520.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
518.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
516.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
514.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
495.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
491.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
476.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
471.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
471.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
471.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
441.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
423.0
DO45267
0 years, male, NA, stage:3, dead, 570 days
411.3
DO50799
0 years, female, NA, stage:2, alive, 540 days
404.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
379.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
349.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
340.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
333.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
317.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
308.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
301.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
289.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
279.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
259.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
253.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
242.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
214.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
213.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
170.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
153.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
148.1
DO50802
0 years, male, NA, stage:2, alive, 930 days
126.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
115.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
110.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
102.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
98.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
71.8
DO45245
0 years, female, NA, stage:2, dead, 240 days
66.0
DO48681
0 years, male, NA, stage:2, alive, 900 days
53.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
50.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
43.4
DO23523
0 years, male, NA, stage:3, alive, 1080 days
40.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
12.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
877
Tumor
2.0
313
Tumor
1.5
125
Tumor
1.4
375
Tumor
1.3
192
Normal
1.1
425
Tumor
1.0
743
Tumor
1.0
131
Tumor
0.9
663
Tumor
0.8
363
Tumor
0.8
217
Tumor
0.8
224
Normal
0.8
391
Tumor
0.8
671
Tumor
0.7
958
Normal
0.6
1044
Normal
0.6
697
Tumor
0.6
745
Tumor
0.6
815
Tumor
0.6
463
Tumor
0.5
354
Normal
0.5
355
Tumor
0.5
862
Normal
0.5
343
Tumor
0.5
516
Normal
0.5
922
Normal
0.5
741
Tumor
0.5
635
Tumor
0.5
921
Tumor
0.5
191
Tumor
0.5
851
Tumor
0.4
384
Normal
0.4
394
Normal
0.4
713
Tumor
0.4
744
Normal
0.4
444
Normal
0.4
221
Tumor
0.4
113
Tumor
0.4
685
Tumor
0.4
392
Normal
0.4
742
Normal
0.3
976
Normal
0.3
823
Tumor
0.3
545
Tumor
0.3
937
Tumor
0.3
647
Tumor
0.3
975
Tumor
0.3
716
Normal
0.3
813
Tumor
0.2
342
Normal
0.2
938
Normal
0.2
863
Tumor
0.2
723
Tumor
0.2
223
Tumor
0.2
665
Tumor
0.2
884
Normal
0.2
268
Normal
0.2
218
Normal
0.2
352
Normal
0.2
478
Normal
0.2
817
Tumor
0.2
672
Normal
0.2
818
Normal
0.1
388
Normal
0.1
386
Normal
0.1
124
Normal
0.1
492
Normal
0.1
524
Normal
0.1
284
Normal
0.1
567
Tumor
0.1
393
Tumor
0.1
558
Normal
0.1
185
Tumor
0.1
494
Normal
0.1
882
Normal
0.1
916
Normal
0.1
186
Normal
0.1
474
Normal
0.1
484
Normal
0.1
918
Normal
0.1
367
Tumor
0.1
257
Tumor
0.1
366
Normal
0.1
926
Normal
0.1
328
Normal
0.1
536
Normal
0.1
137
Tumor
0.1
538
Normal
0.1
517
Tumor
0.1
1022
Normal
0.0
331
Tumor
0.0
715
Tumor
0.0
462
Normal
0.0
572
Normal
0.0
616
Normal
0.0
636
Normal
0.0
664
Normal
0.0
466
Normal
0.0
162
Normal
0.0
368
Normal
0.0
297
Tumor
0.0
514
Normal
0.0
214
Normal
0.0
954
Normal
0.0
448
Normal
0.0
917
Tumor
0.0
283
Tumor
0.0
1028
Normal
0.0
126
Normal
0.0
298
Normal
0.0
983
Tumor
0.0
146
Normal
0.0
415
Tumor
0.0
977
Tumor
0.0
816
Normal
0.0
868
Normal
0.0
482
Normal
0.0
698
Normal
0.0
147
Tumor
0.0
912
Normal
0.0
222
Normal
0.0
618
Normal
0.0
451
Tumor
-0.1
526
Normal
-0.1
523
Tumor
-0.1
445
Tumor
-0.1
332
Normal
-0.1
228
Normal
-0.1
535
Tumor
-0.1
314
Normal
-0.1
111
Normal
-0.1
914
Normal
-0.1
964
Normal
-0.1
852
Normal
-0.1
527
Tumor
-0.1
615
Tumor
-0.1
915
Tumor
-0.1
327
Tumor
-0.1
498
Normal
-0.1
142
Normal
-0.1
112
Tumor
-0.1
383
Tumor
-0.1
1026
Normal
-0.1
814
Normal
-0.1
641
Tumor
-0.1
1045
Tumor
-0.1
422
Normal
-0.1
982
Normal
-0.1
1032
Normal
-0.1
452
Normal
-0.1
414
Normal
-0.1
968
Normal
-0.1
424
Normal
-0.1
978
Normal
-0.1
574
Normal
-0.1
196
Normal
-0.1
472
Normal
-0.1
385
Tumor
-0.1
662
Normal
-0.1
1042
Normal
-0.1
738
Normal
-0.1
227
Tumor
-0.1
195
Tumor
-0.1
447
Tumor
-0.1
212
Normal
-0.1
396
Normal
-0.1
141
Tumor
-0.1
426
Normal
-0.1
148
Normal
-0.1
135
Tumor
-0.2
362
Normal
-0.2
881
Tumor
-0.2
412
Normal
-0.2
666
Normal
-0.2
546
Normal
-0.2
491
Tumor
-0.2
395
Tumor
-0.2
573
Tumor
-0.2
924
Normal
-0.2
488
Normal
-0.2
161
Tumor
-0.2
785
Tumor
-0.2
428
Normal
-0.2
746
Normal
-0.2
866
Normal
-0.2
553
Tumor
-0.2
138
Normal
-0.2
427
Tumor
-0.2
1014
Normal
-0.2
1041
Tumor
-0.2
956
Normal
-0.2
187
Tumor
-0.2
376
Normal
-0.2
435
Tumor
-0.2
311
Tumor
-0.2
312
Normal
-0.2
465
Tumor
-0.2
421
Tumor
-0.2
364
Normal
-0.2
487
Tumor
-0.2
423
Tumor
-0.2
461
Tumor
-0.2
714
Normal
-0.2
261
Tumor
-0.2
1046
Normal
-0.2
172
Normal
-0.2
554
Normal
-0.2
277
Tumor
-0.2
534
Normal
-0.2
864
Normal
-0.2
434
Normal
-0.2
568
Normal
-0.2
213
Tumor
-0.2
981
Tumor
-0.2
858
Normal
-0.3
944
Normal
-0.3
344
Normal
-0.3
686
Normal
-0.3
232
Normal
-0.3
943
Tumor
-0.3
628
Normal
-0.3
286
Normal
-0.3
471
Tumor
-0.3
557
Tumor
-0.3
114
Normal
-0.3
278
Normal
-0.3
564
Normal
-0.3
913
Tumor
-0.3
128
Normal
-0.3
132
Normal
-0.3
262
Normal
-0.3
464
Normal
-0.3
528
Normal
-0.3
563
Tumor
-0.3
416
Normal
-0.3
696
Normal
-0.3
722
Normal
-0.3
456
Normal
-0.3
911
Tumor
-0.3
824
Normal
-0.3
878
Normal
-0.3
188
Normal
-0.3
963
Tumor
-0.3
952
Normal
-0.3
518
Normal
-0.4
874
Normal
-0.4
648
Normal
-0.4
642
Normal
-0.4
777
Tumor
-0.4
1015
Tumor
-0.4
778
Normal
-0.4
627
Tumor
-0.4
756
Normal
-0.4
365
Tumor
-0.4
883
Tumor
-0.4
786
Normal
-0.4
1016
Normal
-0.4
272
Normal
-0.4
468
Normal
-0.4
728
Normal
-0.4
513
Tumor
-0.4
446
Normal
-0.4
966
Normal
-0.4
617
Tumor
-0.4
953
Tumor
-0.4
925
Tumor
-0.4
356
Normal
-0.4
136
Normal
-0.4
432
Normal
-0.4
493
Tumor
-0.4
436
Normal
-0.4
455
Tumor
-0.4
483
Tumor
-0.4
431
Tumor
-0.5
1027
Tumor
-0.5
984
Normal
-0.5
433
Tumor
-0.5
1025
Tumor
-0.5
211
Tumor
-0.5
358
Normal
-0.5
477
Tumor
-0.5
1043
Tumor
-0.5
955
Tumor
-0.5
923
Tumor
-0.5
695
Tumor
-0.5
387
Tumor
-0.5
467
Tumor
-0.5
857
Tumor
-0.5
951
Tumor
-0.5
571
Tumor
-0.5
351
Tumor
-0.5
413
Tumor
-0.5
361
Tumor
-0.5
525
Tumor
-0.6
481
Tumor
-0.6
258
Normal
-0.6
473
Tumor
-0.6
967
Tumor
-0.6
957
Tumor
-0.6
515
Tumor
-0.6
145
Tumor
-0.6
533
Tumor
-0.6
873
Tumor
-0.7
755
Tumor
-0.7
1013
Tumor
-0.7
267
Tumor
-0.7
497
Tumor
-0.7
271
Tumor
-0.7
341
Tumor
-0.7
861
Tumor
-0.7
1021
Tumor
-0.7
285
Tumor
-0.7
353
Tumor
-0.8
171
Tumor
-0.8
865
Tumor
-0.8
127
Tumor
-0.8
727
Tumor
-0.8
231
Tumor
-0.8
1031
Tumor
-0.8
123
Tumor
-0.8
867
Tumor
-0.8
721
Tumor
-0.9
357
Tumor
-0.9
537
Tumor
-0.9
411
Tumor
-0.9
443
Tumor
-0.9
724
Normal
-0.9
737
Tumor
-1.0
661
Tumor
-1.2
965
Tumor
-1.2
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.