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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SERP1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
58.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
153.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
144.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
140.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
138.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
126.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
124.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
123.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
121.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
119.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
118.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
113.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
112.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
111.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
110.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
110.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
107.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
106.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
106.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
106.0
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
105.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
105.1
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
101.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
99.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
98.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
97.6
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
94.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
93.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
92.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
91.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
88.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
88.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
88.3
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
88.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
87.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
87.6
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
87.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
85.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
83.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
83.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
83.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
82.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
82.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
82.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
82.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
81.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
81.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
81.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
81.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
81.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
81.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
81.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
81.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
81.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
80.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
80.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
80.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
79.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
79.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
79.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
79.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
79.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
79.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
78.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
78.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
77.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
77.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
76.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
75.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
75.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
75.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
75.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
74.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
74.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
74.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
74.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
73.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
72.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
72.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
72.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
71.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
70.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
70.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
70.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
70.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
70.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
70.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
69.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
69.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
69.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
69.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
69.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
69.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
69.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
68.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
67.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
67.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
67.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
67.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
67.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
67.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
66.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
66.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
66.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
66.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
66.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
66.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
65.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
65.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
65.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
65.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
64.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
64.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
64.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
64.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
63.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
63.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
63.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
63.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
63.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
62.9
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
62.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
62.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
62.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
62.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
62.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
62.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
62.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
61.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
61.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
61.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
61.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
60.9
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
60.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
60.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
60.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
60.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
60.3
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
60.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
60.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
59.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
59.6
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
59.5
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
59.2
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
59.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
59.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
58.6
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
58.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
58.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
58.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
58.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
57.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
57.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
57.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
56.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
56.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
56.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
56.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
56.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
56.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
56.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
56.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
55.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
55.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
55.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
55.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
55.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
55.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
54.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
54.8
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
54.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
54.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
54.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
54.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
54.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
54.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
54.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
53.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
53.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
53.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
53.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
52.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
52.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
52.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
51.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
51.8
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
51.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
51.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
51.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
51.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
51.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
51.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
50.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
50.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
50.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
50.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
50.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
50.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
50.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
50.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
50.1
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
50.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
50.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
50.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
49.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
49.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
49.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
49.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
49.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
49.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
48.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
48.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
48.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
48.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
48.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
48.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
48.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
48.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
48.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
48.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
48.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
48.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
48.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
48.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
47.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
47.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
47.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
47.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
47.5
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
47.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
47.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
47.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
47.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
47.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
47.2
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
47.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
47.0
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
46.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
46.9
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
46.7
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
46.6
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
46.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
46.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
46.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
46.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
46.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
45.9
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
45.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
45.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
45.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
45.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
45.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
44.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
44.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
44.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
44.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
44.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
44.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
44.3
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
44.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
44.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
44.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
44.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
43.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
43.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
43.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
43.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
43.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
43.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
43.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
43.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
43.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
43.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
42.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
42.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
42.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
42.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
42.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
42.4
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
42.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
42.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
42.1
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
42.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
42.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
41.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
41.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
41.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
41.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
41.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
41.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
41.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
41.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
41.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
40.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
40.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
40.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
40.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
40.3
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
40.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
40.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
40.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
39.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
39.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
39.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
39.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
39.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
38.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
38.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
38.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
38.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
38.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
38.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
38.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
38.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
37.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
36.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
36.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
36.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
36.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
36.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
36.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
36.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
36.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
36.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
35.6
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
35.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
35.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
35.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
34.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
34.6
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
34.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
34.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
33.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
33.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
33.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
33.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
33.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
33.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
33.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
32.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
32.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
32.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
32.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
32.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
31.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
31.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
30.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
30.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
30.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
28.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
28.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
28.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
27.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
27.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
26.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
25.9
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
25.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
24.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
23.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
22.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
21.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
12.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SERP1 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
59.4
Number of samples
231
Samples
Sample
Description
TPM
DO45127
0 years, male, NA, stage:3, dead, 420 days
142.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
136.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
115.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
109.6
DO50815
0 years, male, NA, stage:3, alive, 150 days
107.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
103.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
103.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
103.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
101.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
101.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
92.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
92.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
91.9
DO45125
0 years, male, NA, stage:3, alive, 1680 days
89.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
89.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
88.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
87.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
87.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
86.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
84.8
DO45301
0 years, male, NA, stage:2, dead, 1440 days
83.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
82.6
DO45303
0 years, female, NA, stage:3, alive, 990 days
82.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
80.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
80.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
80.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
80.0
DO23525
0 years, male, NA, stage:4, alive, 1050 days
79.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
78.5
DO45267
0 years, male, NA, stage:3, dead, 570 days
78.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
77.8
DO45261
0 years, male, NA, stage:3, alive, 990 days
77.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
77.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
76.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
76.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
76.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
75.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
75.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
75.1
DO45277
0 years, male, NA, stage:3, alive, 600 days
75.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
73.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
72.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
71.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
71.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
71.1
DO50829
0 years, male, NA, stage:3, alive, 570 days
70.9
DO45123
0 years, female, NA, stage:2, dead, 570 days
70.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
70.4
DO45221
0 years, female, NA, stage:4, dead, 390 days
70.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
70.2
DO45215
0 years, male, NA, stage:2, alive, 1170 days
69.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
69.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
69.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
69.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
68.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
67.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
67.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
67.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
66.9
DO23533
0 years, male, NA, stage:2, alive, 900 days
66.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
66.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
66.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
65.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
65.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
65.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
65.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
65.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
65.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
64.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
64.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
64.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
64.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
63.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
63.7
DO23544
0 years, male, NA, stage:2, alive, 960 days
63.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
63.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
63.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
63.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
62.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
62.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
62.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
62.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
62.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
61.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
61.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
61.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
60.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
60.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
60.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
60.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
60.2
DO23508
0 years, female, NA, stage:2, alive, 390 days
60.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
59.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
59.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
59.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
59.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
59.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
59.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
58.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
58.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
58.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
58.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
58.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
57.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
57.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
57.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
57.4
DO45243
0 years, female, NA, stage:3, alive, 930 days
57.3
DO50817
0 years, male, NA, stage:2, alive, 390 days
57.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
57.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
57.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
57.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
57.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
56.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
56.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
56.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
56.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
56.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
56.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
56.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
55.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
55.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
55.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
55.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
55.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
55.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
55.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
54.8
DO50805
0 years, male, NA, stage:2, alive, 690 days
54.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
54.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
54.2
DO45219
0 years, male, NA, stage:2, alive, 1080 days
54.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
54.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
54.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
53.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
53.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
53.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
53.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
52.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
52.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
52.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
52.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
52.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
52.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
51.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
51.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
51.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
50.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
50.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
50.8
DO45199
0 years, female, NA, stage:2, alive, 1350 days
50.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
50.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
50.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
50.2
DO45305
0 years, male, NA, stage:4, alive, 300 days
50.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
50.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
49.8
DO45189
0 years, female, NA, stage:2, alive, 1200 days
49.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
49.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
49.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
49.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
49.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
49.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
48.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
48.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
48.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
48.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
48.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
48.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
48.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
47.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
47.7
DO45273
0 years, male, NA, stage:2, alive, 480 days
47.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
47.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
47.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
46.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
46.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
46.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
46.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
45.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
45.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
45.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
44.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
44.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
44.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
44.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
44.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
43.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
43.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
43.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
43.2
DO45159
0 years, male, NA, stage:3, alive, 1470 days
43.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
43.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
43.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
43.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
43.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
42.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
42.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
42.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
42.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
42.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
42.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
42.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
42.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
42.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
42.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
42.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
41.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
41.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
41.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
40.5
DO50793
0 years, male, NA, stage:4, alive, 540 days
40.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
40.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
39.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
39.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
39.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
38.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
38.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
38.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
37.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
36.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
36.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
36.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
36.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
35.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
35.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
34.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
33.9
DO50816
0 years, male, NA, stage:2, alive, 390 days
33.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
29.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
27.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
