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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EGR1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
65.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
481.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
460.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
376.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
321.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
263.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
185.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
163.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
146.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
128.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
112.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
95.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
94.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
78.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
75.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
70.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
70.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
68.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
66.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
58.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
56.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
51.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
50.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
44.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
42.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
41.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
37.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
29.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
29.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
29.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
29.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
26.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
23.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
23.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
22.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
21.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
19.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
19.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
19.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
16.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
15.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
15.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
14.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
14.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
12.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
12.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
11.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
11.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
11.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
10.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
9.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
9.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
8.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
7.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
7.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
6.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
5.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
5.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
4.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
1.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EGR1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
195.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
2482.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
2017.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
1963.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
1768.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
1601.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
1495.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
1373.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
1322.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
1124.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
1008.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
994.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
981.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
933.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
924.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
923.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
889.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
882.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
880.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
845.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
843.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
827.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
796.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
772.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
708.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
692.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
692.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
680.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
677.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
673.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
662.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
660.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
651.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
649.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
647.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
644.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
634.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
592.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
588.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
585.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
582.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
574.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
566.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
555.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
552.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
538.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
537.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
525.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
523.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
497.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
494.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
472.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
467.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
467.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
463.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
445.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
442.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
442.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
440.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
437.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
437.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
436.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
428.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
423.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
420.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
420.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
414.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
409.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
403.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
394.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
390.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
383.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
379.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
374.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
366.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
360.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
357.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
355.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
353.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
353.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
351.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
351.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
343.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
343.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
343.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
341.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
336.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
328.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
326.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
324.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
322.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
314.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
310.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
309.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
308.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
308.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
306.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
305.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
297.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
294.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
292.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
291.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
288.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
287.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
286.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
281.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
279.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
278.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
278.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
274.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
273.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
268.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
267.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
264.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
263.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
259.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
254.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
253.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
252.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
248.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
244.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
243.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
241.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
241.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
237.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
232.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
231.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
230.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
229.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
227.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
224.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
224.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
222.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
222.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
221.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
221.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
220.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
220.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
220.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
217.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
216.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
216.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
213.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
212.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
210.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
207.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
206.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
205.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
202.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
202.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
201.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
199.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
199.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
197.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
196.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
195.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
195.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
194.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
193.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
192.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
192.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
189.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
189.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
189.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
188.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
187.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
186.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
186.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
184.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
184.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
183.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
182.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
179.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
175.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
174.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
172.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
170.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
169.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
169.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
169.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
168.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
167.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
166.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
165.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
164.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
162.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
162.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
158.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
157.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
156.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
154.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
154.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
152.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
151.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
151.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
149.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
147.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
144.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
143.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
142.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
142.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
141.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
140.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
139.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
138.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
138.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
138.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
138.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
137.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
137.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
136.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
134.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
131.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
131.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
131.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
130.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
130.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
129.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
127.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
127.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
126.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
125.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
124.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
124.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
123.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
122.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
121.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
120.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
120.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
120.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
119.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
118.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
117.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
115.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
115.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
115.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
114.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
114.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
113.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
112.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
112.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
111.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
110.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
110.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
110.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
109.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
109.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
109.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
108.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
108.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
107.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
106.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
105.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
104.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
104.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
103.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
102.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
102.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
97.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
96.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
96.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
96.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
93.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
92.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
92.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
92.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
91.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
91.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
90.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
89.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
89.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
87.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
87.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
86.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
86.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
86.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
85.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
84.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
83.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
82.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
81.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
81.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
80.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
80.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
79.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
79.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
78.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
77.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
77.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
77.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
76.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
76.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
76.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
76.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
76.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
75.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
75.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
75.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
74.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
73.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
73.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
73.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
72.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
72.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
71.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
71.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
68.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
68.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
68.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
68.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
68.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
67.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
66.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
66.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
65.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
64.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
64.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
64.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
63.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
63.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
63.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
62.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
62.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
62.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
62.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
62.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
62.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
62.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
62.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
60.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
60.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
59.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
59.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
59.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
58.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
58.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
58.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
56.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
56.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
56.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
56.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
55.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
54.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
54.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
54.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
54.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
54.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
54.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
53.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
53.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
53.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
53.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
52.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
52.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
52.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
51.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
51.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
50.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
50.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
49.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
49.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
49.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
49.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
48.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
48.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
47.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
47.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
47.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
46.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
46.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
46.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
44.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
44.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
43.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
43.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
43.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
42.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
42.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
42.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
42.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
41.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
41.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
41.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
40.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
40.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
40.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
40.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
39.6
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
39.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
38.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
38.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
38.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
38.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
37.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
37.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
36.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
36.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
36.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
36.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
36.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
36.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
36.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
35.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
35.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
35.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
35.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
35.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
34.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
34.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
33.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
33.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
33.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
33.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
33.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
32.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
32.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
32.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
32.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
32.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
31.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
31.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
31.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
31.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
30.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
30.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
30.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
30.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
30.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
30.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
29.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
29.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
29.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
29.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
28.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
28.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
28.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
28.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
27.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
27.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
26.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
26.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
26.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
25.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
25.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
25.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
25.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
24.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
24.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
24.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
24.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
23.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
23.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
23.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
23.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
23.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
22.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
22.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
21.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
21.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
21.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
21.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
20.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
20.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
20.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
20.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
20.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
19.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
19.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
19.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
19.3
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
18.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
18.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
18.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
18.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
18.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
17.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
17.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
17.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
17.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
17.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
16.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
16.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
16.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
16.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
15.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
15.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
14.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
14.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
14.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
13.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
12.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
12.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
12.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
12.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
11.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
9.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
8.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
7.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
7.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
6.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
6.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
5.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
5.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
4.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
4.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
4.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
3.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EGR1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
144.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
1230.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
726.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
706.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
691.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
678.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
675.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
511.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
488.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
450.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
429.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
407.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
368.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
352.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
335.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
281.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
275.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
265.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
244.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
224.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
218.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
214.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
196.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
184.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
165.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
143.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
140.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
139.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
134.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
127.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
125.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
109.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
106.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
105.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
103.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
97.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
97.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
97.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
95.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
95.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
91.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
88.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
88.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
86.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
84.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
83.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
76.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
73.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
70.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
64.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
63.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
63.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
60.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
56.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
56.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
55.4
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
54.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
52.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
51.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
47.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
47.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
45.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
45.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
44.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
43.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
39.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
39.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
39.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
38.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
38.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
31.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
31.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
30.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
30.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
30.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
29.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
29.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
27.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
26.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
26.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
26.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
26.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
24.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
22.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
22.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
20.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
16.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
16.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
15.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
12.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
11.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
11.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
11.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
10.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
9.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
9.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
9.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EGR1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
104.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
1478.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
1140.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
747.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
678.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
668.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
611.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
577.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
526.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
519.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
480.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
460.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
446.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
440.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
412.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
385.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
384.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
361.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
343.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
340.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
340.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
330.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
328.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
324.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
323.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
315.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
312.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
299.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
281.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
255.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
255.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
252.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
248.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
245.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
244.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
243.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
232.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
208.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
203.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
191.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
191.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
190.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
184.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
180.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
180.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
178.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
174.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
173.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
152.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
150.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
148.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
147.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
146.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
145.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
143.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
142.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
142.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
142.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
141.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
139.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
139.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
138.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
136.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
135.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
133.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
133.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
127.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
127.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
125.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
123.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
117.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
117.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
113.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
113.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
110.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
108.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
108.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
106.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
104.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
103.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
102.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
102.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
101.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
100.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
99.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
97.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
95.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
94.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
91.8
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
91.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
91.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
89.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
89.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
87.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
84.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
84.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
84.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
83.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
83.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
81.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
79.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
79.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
78.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
78.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
77.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
76.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
76.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
75.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
75.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
74.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
73.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
73.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
73.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
73.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
69.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
69.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
68.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
65.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
64.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
64.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
63.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
62.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
61.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
60.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
60.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
57.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
56.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
55.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
55.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
54.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
52.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
52.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
52.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
51.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
50.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
50.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
49.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
49.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
48.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
48.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
46.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
46.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
44.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
44.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
43.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
43.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
42.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
42.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
41.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
41.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
41.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
40.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
39.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
39.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
38.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
38.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
37.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
37.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
36.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
36.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
35.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
34.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
33.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
33.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
33.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
33.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
33.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
33.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
32.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
32.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
32.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
32.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
31.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
31.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
29.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
29.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
28.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
27.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
27.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
27.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
27.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
26.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
26.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
26.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
25.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
25.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
25.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
25.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
25.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
25.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
24.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
24.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
24.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
23.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
23.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
22.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
22.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
21.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
21.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
21.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
21.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
21.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
21.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
20.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
20.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
20.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
19.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
19.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
18.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
18.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
18.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
18.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
17.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
17.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
17.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
17.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
16.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
16.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
16.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
16.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
16.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
15.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
14.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
14.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
14.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
14.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
13.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
13.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
12.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
12.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
12.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
11.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
11.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
11.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
11.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
11.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
11.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
10.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
10.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
10.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
9.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
9.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
9.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
9.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
8.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
6.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
5.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
5.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
5.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
5.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
4.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
4.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
4.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
3.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
3.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
2.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2.6
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
2.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
2.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
1.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
1.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
0.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0006630003
Tumor
2.2
CPT0065750003
Tumor
1.6
CPT0019990003
Tumor
1.4
CPT0092790003
Tumor
1.4
CPT0006440003
Tumor
1.3
CPT0066470004
Tumor
1.1
CPT0079230003
Tumor
0.9
CPT0086030003
Tumor
0.9
CPT0065810003
Tumor
0.8
CPT0001500009
Tumor
0.8
CPT0025880003
Tumor
0.7
CPT0007860003
Tumor
0.7
CPT0025230003
Tumor
0.6
CPT0026420001
Normal
0.5
CPT0007870001
Normal
0.5
CPT0014160003
Tumor
0.5
CPT0092290003
Tumor
0.4
CPT0077140001
Normal
0.4
CPT0092740003
Normal
0.4
CPT0071150004
Tumor
0.4
CPT0014130001
Normal
0.3
CPT0069160003
Tumor
0.3
CPT0092310003
Normal
0.3
CPT0092730003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0025060001
Normal
0.2
CPT0077110003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0020020001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0088550004
Tumor
0.0
CPT0015730003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0076330003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0015810003
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0069190001
Normal
-0.3
CPT0026410003
Tumor
-0.3
CPT0079270003
Tumor
-0.4
CPT0006530001
Normal
-0.5
CPT0085670003
Tumor
-0.5
CPT0088920001
Normal
-0.5
CPT0025920001
Normal
-0.6
CPT0086370003
Normal
-0.6
CPT0079300001
Normal
-0.6
CPT0001510001
Normal
-0.7
CPT0006730001
Normal
-0.7
CPT0014470001
Normal
-0.7
CPT0076350001
Normal
-0.8
CPT0088570001
Normal
-0.8
CPT0014450004
Tumor
-0.8
CPT0078800003
Tumor
-0.9
CPT0092800003
Normal
-1.0
CPT0088970003
Tumor
-1.1
CPT0065820001
Normal
-1.1
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0087040003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0006950001
Normal
N/A
CPT0082010001
Normal
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0079510001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
