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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HSPH1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
71.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
68.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
66.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
65.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
60.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
50.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
47.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
46.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
44.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
44.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
42.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
40.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
39.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
38.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
37.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
35.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
35.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
33.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
33.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
32.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
31.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
30.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
29.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
27.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
27.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
26.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
26.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
26.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
26.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
26.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
25.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
24.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
24.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
23.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
23.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
22.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
22.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
22.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
22.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
21.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
21.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
20.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
19.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
18.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
18.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
16.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
16.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
14.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
13.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
12.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
12.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
12.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
11.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
10.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
9.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
8.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
8.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
7.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
5.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
4.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HSPH1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
107.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
63.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
62.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
58.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
55.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
53.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
53.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
52.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
47.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
43.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
40.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
39.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
38.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
37.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
36.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
36.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
36.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
34.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
33.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
32.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
32.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
31.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
31.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
31.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
30.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
30.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
29.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
28.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
27.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
26.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
26.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
26.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
25.7
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
25.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
25.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
24.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
24.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
24.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
24.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
24.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
24.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
24.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
24.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
23.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
23.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
22.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
22.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
22.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
22.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
22.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
22.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
22.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
22.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
21.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
21.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
21.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
21.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
21.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
21.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
21.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
20.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
20.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
20.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
20.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
20.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
20.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
20.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
20.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
20.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
19.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
19.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
19.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
19.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
19.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
19.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
19.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
19.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
19.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
19.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
19.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
19.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
18.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
18.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
18.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
18.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
18.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
18.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
18.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
18.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
18.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
18.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
18.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
18.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
18.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
18.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
17.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
17.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
17.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
17.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
17.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
17.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
17.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
17.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
17.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
17.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
17.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
17.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
17.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
17.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
16.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
16.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
16.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
16.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
16.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
16.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
16.5
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
16.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
16.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
16.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
16.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
16.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
16.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
15.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
15.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
15.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
15.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
15.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
15.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
15.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
15.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
15.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
15.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
15.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
15.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
15.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
15.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
15.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
14.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
14.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
14.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
14.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
14.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
14.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
14.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
14.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
14.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
14.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
14.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
14.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
14.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
14.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
14.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
14.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
14.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
14.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
14.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
14.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
14.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
14.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
14.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
14.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
14.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
14.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
14.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
14.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
14.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
13.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
13.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
13.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
13.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
13.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
13.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
13.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
13.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
13.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
13.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
13.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
13.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
13.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
13.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
13.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
13.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
13.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
13.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
13.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
13.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
12.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
12.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
12.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
12.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
12.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
12.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
12.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
12.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
12.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
12.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
12.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
12.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
12.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
12.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
12.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
12.6
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
12.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
12.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
12.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
12.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
12.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
12.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
12.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
12.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
12.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
12.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
12.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
12.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
12.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
12.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
12.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
12.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
12.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
12.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
12.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
12.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
12.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
12.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
12.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
12.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
11.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
11.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
11.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
11.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
11.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
11.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
11.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
11.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
11.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
11.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
11.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
11.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
11.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
11.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
11.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
11.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
11.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
11.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
11.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
11.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
11.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
11.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
11.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
11.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
11.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
11.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
11.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
11.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
11.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
11.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
11.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
11.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
10.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
10.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
10.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
10.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
10.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
10.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
10.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
10.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
10.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
10.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
10.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
10.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
10.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
10.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
10.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
10.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
10.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
10.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
10.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
10.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
10.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
10.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
10.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
10.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
10.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
10.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
10.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
10.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
10.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
10.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
10.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
10.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
9.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
9.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
9.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
9.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
9.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
9.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
9.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
9.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
9.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
9.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
9.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
9.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
9.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
9.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
9.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
9.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
9.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
9.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
9.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
9.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
9.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
9.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
9.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
9.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
9.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
9.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
9.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
9.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
9.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
9.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
9.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
9.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
9.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
9.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
9.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
8.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
8.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
8.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
8.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
8.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
8.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
8.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
8.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
8.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
8.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
8.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
8.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
8.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
8.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
8.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
8.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
8.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
8.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
8.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
8.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
8.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
8.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.0
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
7.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
7.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
7.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
7.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
7.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
7.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
7.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
7.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
7.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
7.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
7.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
7.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
7.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
7.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
7.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
7.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
7.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
7.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
7.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
7.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
7.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
7.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
7.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
7.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
7.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
7.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
7.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
7.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
7.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
7.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
7.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
6.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
6.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
6.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
6.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
6.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
6.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
6.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
6.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
6.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
6.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
6.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
6.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
6.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
6.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
6.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
6.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
6.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
6.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
6.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
6.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
6.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
6.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
6.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
5.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
5.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
5.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
5.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
5.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
5.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
5.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
5.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
5.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
5.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
5.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
5.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
4.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
4.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
4.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
4.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
4.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
4.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HSPH1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
438.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
392.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
68.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
55.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
48.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
45.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
36.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
35.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
35.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
32.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
32.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
30.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
28.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
27.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
27.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
27.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
27.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
27.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
27.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
26.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
26.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
25.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
25.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
25.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
23.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
22.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
22.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
21.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
21.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
20.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
20.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
20.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
20.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
19.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
19.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
19.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
18.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
18.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
18.6
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
18.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
17.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
17.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
17.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
16.9
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
16.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
15.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
15.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
15.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
15.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
15.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
15.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
14.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
14.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
14.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
14.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
14.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
14.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
14.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
14.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
13.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
13.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
13.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
13.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
12.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
12.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
12.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
12.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
12.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
11.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
11.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
11.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
11.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
10.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
10.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
10.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
10.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
9.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
9.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
9.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
9.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
9.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
8.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
8.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
7.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
7.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
7.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
6.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HSPH1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
145.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
111.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
109.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
105.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
95.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
89.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
86.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
77.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
64.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
60.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
59.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
56.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
53.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
50.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
48.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
47.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
47.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
45.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
45.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
45.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
45.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
44.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
44.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
44.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
44.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
43.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
42.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
42.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
41.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
41.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
40.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
39.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
39.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
39.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
39.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
38.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
38.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
38.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
37.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
37.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
37.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
37.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
37.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
36.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
36.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
36.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
35.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
35.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
35.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
35.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
35.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
35.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
34.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
34.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
34.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
34.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
34.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
33.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
33.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
33.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
33.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
33.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
32.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
32.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
32.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
32.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
31.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
31.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
31.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
31.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
30.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
30.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
30.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
30.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
29.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
29.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
29.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
28.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
28.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
28.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
28.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
28.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
27.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
27.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
27.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
27.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
27.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
26.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
26.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
26.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
26.4
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
26.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
26.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
26.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
25.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
25.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
25.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
25.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
25.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
25.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
25.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
25.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
25.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
24.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
24.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
24.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
24.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
24.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
24.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
24.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
24.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
24.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
23.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
23.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
23.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
23.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
23.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
23.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
23.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
23.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
23.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
22.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
22.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
22.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
22.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
22.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
22.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
22.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
22.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
22.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
21.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
21.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
21.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
21.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
21.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
21.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
21.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
21.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
20.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
20.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
20.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
20.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
20.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
20.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
20.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
20.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
20.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
20.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
20.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
20.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
19.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
19.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
19.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
19.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
19.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
19.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
19.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
19.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
19.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
19.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
19.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
19.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
18.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
18.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
18.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
18.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
18.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
18.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
18.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
18.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
18.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
18.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
18.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
18.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
17.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
17.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
17.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
17.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
17.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
17.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
17.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
17.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
17.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
17.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
17.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
17.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
17.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
17.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
17.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
16.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
16.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
16.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
16.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
16.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
16.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
16.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
16.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
16.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
16.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
15.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
15.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
15.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
15.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
15.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
15.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
15.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
15.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
15.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
15.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
15.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
14.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
14.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
14.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
14.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
14.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
14.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
14.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
14.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
14.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
14.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
13.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
13.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
12.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.3
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
12.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
12.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
12.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
11.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
11.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
11.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
11.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
11.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
11.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
11.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
11.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
11.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
10.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
10.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
10.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
10.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
9.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
9.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
9.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
8.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
8.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
8.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
6.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
5.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
3.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
2.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
2.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
1.6
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.4
CPT0002270011
Tumor
1.0
CPT0023350003
Tumor
0.9
CPT0078800003
Tumor
0.9
CPT0075130003
Tumor
0.9
CPT0017850003
Tumor
0.8
CPT0079410003
Tumor
0.8
CPT0076330003
Tumor
0.7
CPT0001260009
Tumor
0.7
CPT0078660003
Tumor
0.7
CPT0092740003
Normal
0.6
CPT0012550003
Tumor
0.6
CPT0011410003
Tumor
0.6
CPT0012180003
Tumor
0.6
CPT0017450001
Normal
0.6
CPT0012280003
Tumor
0.6
CPT0081880003
Tumor
0.5
CPT0076350001
Normal
0.4
CPT0017410003
Tumor
0.4
CPT0079430001
Normal
0.4
CPT0025060001
Normal
0.4
CPT0001350001
Normal
0.4
CPT0088550004
Tumor
0.3
CPT0063330001
Normal
0.3
CPT0001180009
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0092310003
Normal
0.3
CPT0012670003
Tumor
0.3
CPT0026420001
Normal
0.2
CPT0014450004
Tumor
0.2
CPT0012570003
Normal
0.2
CPT0075170001
Normal
0.2
CPT0086890003
Normal
0.2
CPT0084560003
Tumor
0.2
CPT0001190001
Normal
0.2
CPT0078530001
Normal
0.2
CPT0065430003
Tumor
0.2
CPT0013790003
Normal
0.2
CPT0014470001
Normal
0.2
CPT0066430001
Normal
0.2
CPT0012770003
Normal
0.2
CPT0069000003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0077140001
Normal
0.2
CPT0075570001
Normal
0.2
CPT0069160003
Tumor
0.2
CPT0065820001
Normal
0.2
CPT0012090003
Normal
0.2
CPT0079510001
Normal
0.1
CPT0077320001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0065450001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0069190001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0092190003
Normal
0.1
CPT0012290003
Normal
0.1
CPT0023360001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0086370003
Normal
0.1
CPT0025610001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0007870001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0086830003
Normal
0.1
CPT0092800003
Normal
0.1
CPT0019160001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0009020003
Normal
0.1
CPT0063630003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0077500001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0009080003
Normal
0.0
CPT0001340003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0010120001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0088500001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0025050003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0025880003
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0002350011
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0012370003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0086870003
Tumor
-0.1
CPT0079230003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0012080003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0015810003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0024670003
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0077110003
Tumor
-0.2
CPT0078830003
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0006900003
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0025290003
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0085670003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0019990003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0014370004
Tumor
-0.3
CPT0019130003
Tumor
-0.3
CPT0078930003
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0009000003
Tumor
-0.4
CPT0079270003
Tumor
-0.4
CPT0088630003
Tumor
-0.4
CPT0000780007
Tumor
-0.4
CPT0088900003
Tumor
-0.4
CPT0065930003
Tumor
-0.4
CPT0065750003
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0079480003
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0025350003
Tumor
-0.4
CPT0026410003
Tumor
-0.4
CPT0012900004
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0081990003
Tumor
-0.4
CPT0066470004
Tumor
-0.5
CPT0000870016
Tumor
-0.5
CPT0006440003
Tumor
-0.5
CPT0088760003
Tumor
-0.5
CPT0011240003
Tumor
-0.5
CPT0010160003
Tumor
-0.5
CPT0086030003
Tumor
-0.5
CPT0088690003
Tumor
-0.6
CPT0077490003
Tumor
-0.6
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
