HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:22.1 nTPM
HPA Brain:72.2 nTPM
GTEx:22.1 nTPM
FANTOM5:6.2 Scaled Tags Per Million
Pig:71.3 nTPM
Mouse:6.0 nTPM
Allen mouse:4.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 72.2
Sample id Sample description nTPM
Hippocampus
nTPM: 72.2
2621 Female, age 67, right hemisphere 90.1
2148 Female, age 91, left hemisphere 77.1
2529 Female, age 94, left hemisphere 74.3
1898 Male, age 80, left hemisphere 72.2
1855 Male, age 76, left hemisphere 65.6
1911 Female, age 85, right hemisphere 53.7
Dentate gyrus
nTPM: 68.1
1927 Female, age 91, both hemispheres 84.8
2530 Female, age 94, left hemisphere 81.7
2531 Female, age 67, both hemispheres 76.2
2528 Male, age 74, both hemispheres 62.9
2010 Male, age 76, both hemispheres 51.7
2246 Female, age 85, both hemispheres 51.2
Entorhinal gyrus
nTPM: 65.6
2613 Female, age 94, left hemisphere 110.6
2686 Male, age 75, right hemisphere 76.4
2764 Male, age 80, right hemisphere 59.9
1938 Female, age 85, left hemisphere 54.9
1787 Male, age 76, left hemisphere 53.4
2117 Female, age 91, right hemisphere 38.6
Hippocampus, CA1
nTPM: 59.2
2749 Male, age 80, left hemisphere 77.9
2527 Male, age 74, both hemispheres 74.3
1873 Female, age 85, both hemispheres 62.5
2082 Female, age 91, right hemisphere 42.7
2045 Male, age 76, both hemispheres 38.3
Hippocampus, CA2
nTPM: 70.3
1963 Male, age 80, left hemisphere 104.4
2437 Female, age 94, left hemisphere 97.3
1892 Male, age 76, both hemispheres 74.4
2113 Female, age 91, right hemisphere 51.1
2249 Male, age 74, both hemispheres 47.6
1940 Female, age 85, left hemisphere 46.8
Hippocampus, CA3
nTPM: 69.5
2861 Female, age 67, both hemispheres 117.3
2620 Female, age 94, left hemisphere 78.6
2137 Male, age 80, left hemisphere 71.6
1867 Male, age 76, both hemispheres 55.1
2436 Male, age 74, both hemispheres 47.6
1891 Female, age 85, both hemispheres 46.7
Parahippocampal cortex
nTPM: 59.8
2245 Female, age 91, both hemispheres 86.0
2622 Female, age 67, right hemisphere 77.2
1990 Female, age 91, right hemisphere 64.6
2693 Female, age 94, both hemispheres 63.9
2250 Female, age 67, right hemisphere 58.2
2692 Male, age 74, both hemispheres 58.0
1850 Male, age 80, both hemispheres 52.4
2532 Female, age 72, left hemisphere 51.7
1933 Female, age 85, both hemispheres 44.6
2018 Male, age 76, both hemispheres 41.4
Perirhinal gyrus
nTPM: 57.9
1847 Female, age 91, left hemisphere 66.9
2521 Female, age 94, right hemisphere 66.8
1794 Male, age 80, right hemisphere 59.5
1841 Female, age 85, right hemisphere 50.1
2848 Male, age 76, right hemisphere 46.0
Subiculum
nTPM: 52.5
2438 Female, age 94, left hemisphere 74.0
2619 Male, age 74, both hemispheres 61.3
1977 Female, age 85, both hemispheres 48.4
1901 Male, age 80, both hemispheres 48.2
2729 Female, age 91, right hemisphere 47.9
2042 Male, age 76, both hemispheres 34.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 22.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.1
Samples: 197

Max nTPM: 59.5
Min nTPM: 0.5
Std nTPM: 13.2
Median nTPM: 20.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 59.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 58.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 55.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 52.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 51.1
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 49.8
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 48.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 48.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 47.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 47.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 46.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 6.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.2
FF:10169-103B7 60 years, female 8.3
FF:10153-102I9 76 years, female 4.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 71.3
Pig sample Sample description nTPM
Subiculum
nTPM: 41.0
Samples: 4

Max nTPM: 49.3
Min nTPM: 32.9
Sample A Female 49.3
Sample B Female 32.9
Sample C Male 48.7
Sample D Male 33.2
Dorsal hippocampus
nTPM: 49.6
Samples: 4

Max nTPM: 63.1
Min nTPM: 32.7
Sample A Female 63.1
Sample B Female 54.9
Sample C Male 47.8
Sample D Male 32.7
Entorhinal cortex
nTPM: 66.3
Samples: 4

Max nTPM: 78.9
Min nTPM: 54.6
Sample A Female 74.2
Sample B Female 57.3
Sample C Male 78.9
Sample D Male 54.6
Ventral hippocampus
nTPM: 71.3
Samples: 4

Max nTPM: 97.3
Min nTPM: 53.2
Sample A Female 80.3
Sample B Female 53.2
Sample C Male 97.3
Sample D Male 54.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 6.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 7.5
Min nTPM: 3.7
Sample A Male 6.9
Sample B Male 7.5
Sample C Female 4.9
Sample D Female 3.7
Hippocampal formation
nTPM: 6.0
Samples: 4

Max nTPM: 7.0
Min nTPM: 4.1
Sample A Male 6.8
Sample B Male 5.9
Sample C Female 4.1
Sample D Female 7.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.9
71495723 Antisense, RP_050913_03_E02, Mouse strain C57BL/6J (56 days, male) 4.9
73636153 Antisense, RP_050913_03_E02, Mouse strain C57BL/6J (56 days, male) 4.7

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