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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HOXB3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
81.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
61.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
60.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
47.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
46.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
45.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
43.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
41.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
35.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
35.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
32.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
28.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
27.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
26.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
26.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
25.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
25.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
25.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
24.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
23.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
23.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
23.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
23.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
23.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
21.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
20.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
19.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
19.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
19.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
18.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
18.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
17.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
16.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
16.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
16.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
16.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
16.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
14.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
14.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
14.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
14.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
13.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
13.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
13.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
11.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
11.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
10.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
10.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
9.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
8.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
8.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
8.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
7.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
7.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
6.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
6.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HOXB3 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
7.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
56.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
38.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
32.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
29.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
28.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
25.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
25.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
24.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
24.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
23.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
23.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
23.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
22.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
21.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
21.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
21.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
19.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
19.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
17.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
17.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
17.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
17.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
17.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
17.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
16.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
16.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
16.2
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
16.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
16.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
15.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
15.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
15.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
15.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
15.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
15.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
15.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
15.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
15.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
15.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
14.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
14.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
14.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
14.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
14.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
14.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
14.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
14.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
14.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
14.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
14.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
14.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
14.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
14.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
14.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
13.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
13.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
13.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
13.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
13.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
13.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
13.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
13.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
13.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
13.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
12.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
12.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
12.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
12.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
12.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
12.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
12.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
12.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
12.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
12.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
12.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
12.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
12.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
12.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
12.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
12.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
12.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
12.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
12.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
11.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
11.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
11.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
11.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
11.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
11.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
11.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
11.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
11.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
11.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
11.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
11.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
11.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
11.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
11.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
11.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
11.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
11.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
10.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
10.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
10.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
10.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
10.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
10.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
10.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
10.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
10.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
10.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
10.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
10.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
10.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
10.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
10.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
10.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
10.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
10.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
10.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
10.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
10.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
10.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
9.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
9.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
9.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
9.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
9.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
9.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
9.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
9.5
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
9.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
9.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
9.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
9.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
9.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
9.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
9.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
9.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
9.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
9.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
9.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
9.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
9.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
9.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
9.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
9.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
9.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
9.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
9.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
9.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
8.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
8.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
8.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
8.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
8.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
8.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
8.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
8.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
8.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
8.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
8.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
8.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
8.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
8.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
8.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
8.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
8.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
8.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
8.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
8.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
8.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
8.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
8.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
8.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
7.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
7.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
7.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
7.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
7.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
7.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
7.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
7.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
7.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
7.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
7.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
7.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
7.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
7.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
7.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
7.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
7.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
7.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
7.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
7.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
7.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
7.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
7.2
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
7.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
7.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
7.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
7.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
7.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
7.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
7.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
7.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
7.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
7.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
7.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
7.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
6.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
6.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
6.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
6.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
6.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
6.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
6.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
6.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
6.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
6.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
6.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
6.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
6.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
6.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
6.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
6.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
6.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
6.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
6.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
6.6
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
6.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
6.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
6.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
6.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
6.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
6.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
6.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
6.2
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
6.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
6.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
6.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
6.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
6.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
6.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
6.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
5.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
5.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
5.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
5.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
5.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
5.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
5.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
5.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
5.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
5.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
5.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
5.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
5.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
5.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
5.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
5.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
5.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
5.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
5.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
5.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
5.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
5.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
5.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
5.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
5.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
5.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
5.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
5.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
5.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
5.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
5.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
5.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
5.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
5.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
5.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
5.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
5.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
5.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
5.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
5.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
5.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
5.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
5.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
5.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
5.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
5.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
5.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
5.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
5.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
5.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
5.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
5.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
5.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
5.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
5.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
5.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
5.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
5.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
5.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
4.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
4.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
4.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
4.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
4.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
4.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
4.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
4.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
4.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
4.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
4.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
4.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
4.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
4.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
4.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
4.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
4.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
4.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
4.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
4.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
4.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
4.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
4.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
4.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
4.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
4.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
4.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
4.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
4.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
4.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
4.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
4.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
4.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
4.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
4.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
4.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
4.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
4.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
4.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
4.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
4.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
4.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
4.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
4.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
4.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
4.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
4.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
4.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
3.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
3.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
3.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
3.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
3.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
3.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
3.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
3.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
3.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
3.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
3.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
3.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
3.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
3.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
3.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
3.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
3.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
3.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
3.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
3.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
3.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
3.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
3.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
3.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
3.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
3.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
3.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
3.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
3.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
3.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
3.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
3.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
3.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
3.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
3.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
3.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
3.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
3.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
3.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
3.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
3.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
3.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
3.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
3.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
3.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
3.0
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
3.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
3.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
3.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
3.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
3.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
3.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
2.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
2.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
2.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
2.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
2.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
2.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
2.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
2.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
2.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
2.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
2.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
2.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
2.7
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
2.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
2.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
2.6
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
2.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
2.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
2.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
2.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
2.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
2.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
2.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
2.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
2.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
2.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
2.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
2.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
2.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
2.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
2.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
2.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
2.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
2.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
2.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
1.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
1.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
1.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
1.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
1.8
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
1.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
1.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
1.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
1.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
1.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
1.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
1.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
1.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
1.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
1.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
1.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
1.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
1.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
1.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
0.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
0.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
0.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HOXB3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
24.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
23.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
20.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
19.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
19.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
19.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
18.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
18.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
18.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
17.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
17.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
17.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
16.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
16.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
16.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
15.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
15.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
15.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
15.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
15.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
14.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
14.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
14.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
13.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
12.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
12.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
12.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
11.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
11.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
11.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
11.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
11.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
11.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
11.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
11.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
11.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
11.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
11.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
10.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
10.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
10.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
10.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
10.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
10.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
10.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
9.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
9.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
9.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
9.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
9.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
8.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
8.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
8.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
8.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
8.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
7.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
7.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
7.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
7.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
7.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
6.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
6.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
6.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
6.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
6.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
5.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
5.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
5.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
5.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
5.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
5.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
5.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
4.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
4.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
4.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
4.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
4.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
4.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
4.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
3.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
3.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
3.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
3.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
3.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HOXB3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
85.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
73.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
54.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
48.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
47.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
46.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
45.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
45.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
45.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
44.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
43.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
42.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
42.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
42.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
41.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
40.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
38.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
38.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
37.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
37.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
36.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
36.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
36.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
36.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
33.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
32.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
32.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
31.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
30.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
30.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
28.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
28.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
28.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
28.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
28.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
27.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
27.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
26.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
26.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
25.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
25.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
25.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
25.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
25.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
25.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
24.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
23.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
23.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
23.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
23.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
22.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
22.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
22.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
21.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
21.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
21.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
21.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
21.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
21.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
21.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
21.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
20.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
19.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
19.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
19.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
19.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
19.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
19.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
18.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
18.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
18.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
18.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
18.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
18.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
18.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
17.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
17.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
17.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
17.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
17.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
17.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
16.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
16.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
16.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
16.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
16.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
16.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
16.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
16.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
15.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
15.8
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
15.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
15.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
15.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
15.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
15.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
14.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
14.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
14.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
14.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
13.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
13.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
13.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
13.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
13.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
13.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
13.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
13.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
13.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
13.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
12.9
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
12.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
12.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
11.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
11.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
11.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
11.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
11.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
11.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
11.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
11.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
10.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
10.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
10.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
10.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
9.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
9.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
9.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
9.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
9.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
8.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
8.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
8.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
8.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
8.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
8.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
8.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
8.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
8.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
8.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
8.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
8.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
8.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
8.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
8.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
7.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
7.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
7.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
7.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
7.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
7.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
7.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
7.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
7.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
6.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
6.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
6.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
6.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
6.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
6.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
6.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
6.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
6.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
6.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
6.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
6.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
6.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
5.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
5.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
5.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
5.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
5.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
5.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
5.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
5.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
5.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
5.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
5.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
5.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
5.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
5.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
5.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
4.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
4.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
4.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
4.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
4.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
4.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
4.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
4.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
4.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
4.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
4.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
4.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
4.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
3.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
3.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
3.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
3.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
3.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
3.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
3.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
3.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
3.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
3.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
3.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
3.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
3.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
2.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
2.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
2.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
2.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
2.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
2.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
1.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
1.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
1.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
1.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
1.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
1.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
1.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
1.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
1.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
1.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
0.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
0.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
0.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
0.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
0.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
0.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
0.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
0.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
0.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
