HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:13.4 nTPM
HPA Brain:44.2 nTPM
GTEx:13.4 nTPM
FANTOM5:50.6 Scaled Tags Per Million
Pig:64.1 nTPM
Mouse:27.1 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010087
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 44.2
Sample id Sample description nTPM
Hippocampus
nTPM: 43.0
1911 Female, age 85, right hemisphere 46.5
1855 Male, age 76, left hemisphere 44.5
2148 Female, age 91, left hemisphere 44.2
1898 Male, age 80, left hemisphere 44.0
2529 Female, age 94, left hemisphere 43.4
2621 Female, age 67, right hemisphere 35.7
Dentate gyrus
nTPM: 38.1
2010 Male, age 76, both hemispheres 55.2
2528 Male, age 74, both hemispheres 41.9
2246 Female, age 85, both hemispheres 37.8
1927 Female, age 91, both hemispheres 34.0
2530 Female, age 94, left hemisphere 32.0
2531 Female, age 67, both hemispheres 27.9
Entorhinal gyrus
nTPM: 33.3
2117 Female, age 91, right hemisphere 50.1
1787 Male, age 76, left hemisphere 40.0
1938 Female, age 85, left hemisphere 34.9
2686 Male, age 75, right hemisphere 28.0
2764 Male, age 80, right hemisphere 25.3
2613 Female, age 94, left hemisphere 21.4
Hippocampus, CA1
nTPM: 40.1
1873 Female, age 85, both hemispheres 44.0
2527 Male, age 74, both hemispheres 43.8
2045 Male, age 76, both hemispheres 42.6
2082 Female, age 91, right hemisphere 41.4
2749 Male, age 80, left hemisphere 28.6
Hippocampus, CA2
nTPM: 38.4
2113 Female, age 91, right hemisphere 43.5
2249 Male, age 74, both hemispheres 43.5
1940 Female, age 85, left hemisphere 41.6
1963 Male, age 80, left hemisphere 36.6
1892 Male, age 76, both hemispheres 34.3
2437 Female, age 94, left hemisphere 31.1
Hippocampus, CA3
nTPM: 35.8
1867 Male, age 76, both hemispheres 45.6
1891 Female, age 85, both hemispheres 44.7
2436 Male, age 74, both hemispheres 40.3
2861 Female, age 67, both hemispheres 29.4
2137 Male, age 80, left hemisphere 28.8
2620 Female, age 94, left hemisphere 25.9
Parahippocampal cortex
nTPM: 36.1
2018 Male, age 76, both hemispheres 62.8
2692 Male, age 74, both hemispheres 38.8
2250 Female, age 67, right hemisphere 35.9
1933 Female, age 85, both hemispheres 35.1
1990 Female, age 91, right hemisphere 35.0
2245 Female, age 91, both hemispheres 34.1
1850 Male, age 80, both hemispheres 32.4
2622 Female, age 67, right hemisphere 30.2
2693 Female, age 94, both hemispheres 29.8
2532 Female, age 72, left hemisphere 27.1
Perirhinal gyrus
nTPM: 31.6
1841 Female, age 85, right hemisphere 34.4
2521 Female, age 94, right hemisphere 32.1
1847 Female, age 91, left hemisphere 30.5
2848 Male, age 76, right hemisphere 30.5
1794 Male, age 80, right hemisphere 30.3
Subiculum
nTPM: 44.2
2729 Female, age 91, right hemisphere 54.6
2042 Male, age 76, both hemispheres 53.1
2619 Male, age 74, both hemispheres 43.8
2438 Female, age 94, left hemisphere 41.7
1901 Male, age 80, both hemispheres 36.7
1977 Female, age 85, both hemispheres 35.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 13.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.4
Samples: 197

Max nTPM: 47.6
Min nTPM: 5.6
Std nTPM: 5.4
Median nTPM: 12.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 47.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 47.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 30.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 26.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 26.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 24.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 24.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 23.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 22.6
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 21.6
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 21.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 50.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.6
FF:10153-102I9 76 years, female 65.0
FF:10169-103B7 60 years, female 36.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 64.1
Pig sample Sample description nTPM
Subiculum
nTPM: 64.1
Samples: 4

Max nTPM: 68.1
Min nTPM: 58.7
Sample A Female 67.4
Sample B Female 68.1
Sample C Male 62.3
Sample D Male 58.7
Dorsal hippocampus
nTPM: 55.5
Samples: 4

Max nTPM: 68.6
Min nTPM: 42.7
Sample A Female 62.1
Sample B Female 48.5
Sample C Male 68.6
Sample D Male 42.7
Entorhinal cortex
nTPM: 46.4
Samples: 4

Max nTPM: 52.6
Min nTPM: 39.4
Sample A Female 44.4
Sample B Female 49.2
Sample C Male 52.6
Sample D Male 39.4
Ventral hippocampus
nTPM: 56.3
Samples: 4

Max nTPM: 60.9
Min nTPM: 51.3
Sample A Female 56.2
Sample B Female 56.7
Sample C Male 60.9
Sample D Male 51.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 27.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.1
Samples: 4

Max nTPM: 30.2
Min nTPM: 25.1
Sample A Male 30.2
Sample B Male 25.1
Sample C Female 27.2
Sample D Female 25.8
Hippocampal formation
nTPM: 24.9
Samples: 4

Max nTPM: 27.3
Min nTPM: 23.1
Sample A Male 27.3
Sample B Male 25.2
Sample C Female 23.1
Sample D Female 23.8

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