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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YPEL5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
44.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
108.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
93.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
91.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
86.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
82.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
81.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
72.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
64.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
63.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
63.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
62.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
61.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
60.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
59.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
57.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
56.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
54.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
53.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
53.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
50.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
49.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
49.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
48.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
48.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
47.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
46.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
45.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
45.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
43.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
43.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
43.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
41.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
39.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
38.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
36.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
35.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
35.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
34.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
34.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
33.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
33.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
32.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
32.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
32.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
31.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
31.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
31.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
30.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
30.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
28.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
28.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
27.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
26.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
26.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
26.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
25.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
23.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
22.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
20.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
19.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
18.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
16.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
16.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YPEL5 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
294.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
162.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
157.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
125.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
121.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
115.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
113.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
112.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
107.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
103.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
103.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
101.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
100.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
100.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
98.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
96.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
94.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
92.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
91.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
90.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
90.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
89.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
89.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
89.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
88.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
88.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
88.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
87.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
86.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
86.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
85.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
85.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
84.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
81.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
81.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
81.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
80.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
80.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
80.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
80.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
79.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
79.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
79.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
79.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
79.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
79.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
78.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
78.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
78.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
78.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
78.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
78.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
78.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
77.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
77.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
77.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
77.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
77.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
76.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
76.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
76.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
76.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
75.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
75.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
75.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
74.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
74.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
74.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
74.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
74.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
74.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
74.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
73.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
73.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
73.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
73.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
73.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
73.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
72.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
72.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
72.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
72.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
72.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
72.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
72.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
72.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
72.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
72.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
72.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
71.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
71.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
71.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
71.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
71.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
71.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
70.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
70.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
70.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
70.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
70.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
70.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
70.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
70.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
70.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
70.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
70.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
69.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
69.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
69.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
69.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
69.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
69.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
69.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
69.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
69.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
68.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
68.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
68.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
68.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
68.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
68.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
68.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
67.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
67.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
67.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
67.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
67.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
67.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
67.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
66.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
66.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
66.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
66.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
66.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
66.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
66.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
66.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
66.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
66.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
66.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
66.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
66.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
66.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
65.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
65.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
65.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
65.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
65.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
65.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
65.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
65.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
64.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
64.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
64.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
64.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
64.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
64.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
64.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
64.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
63.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
63.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
63.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
63.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
63.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
63.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
63.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
63.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
63.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
62.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
62.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
62.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
62.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
62.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
62.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
62.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
62.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
62.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
62.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
62.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
61.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
61.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
61.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
61.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
61.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
61.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
61.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
61.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
61.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
61.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
61.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
60.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
60.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
60.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
60.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
60.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
60.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
60.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
60.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
60.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
60.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
59.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
59.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
59.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
59.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
59.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
59.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
59.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
59.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
59.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
59.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
59.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
59.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
59.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
59.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
59.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
58.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
58.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
58.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
58.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
58.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
58.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
58.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
58.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
58.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
58.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
58.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
57.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
57.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
57.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
57.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
57.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
57.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
57.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
57.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
57.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
57.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
57.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
57.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
56.9
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
56.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
56.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
56.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
56.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
56.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
56.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
56.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
56.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
56.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
56.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
56.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
56.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
56.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
56.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
56.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
56.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
56.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
56.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
56.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
56.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
56.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
56.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
56.0
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
55.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
55.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
55.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
55.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
55.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
55.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
55.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
55.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
55.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
55.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
55.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
55.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
55.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
54.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
54.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
54.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
54.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
54.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
54.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
54.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
54.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
54.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
54.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
54.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
54.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
54.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
54.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
53.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
53.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
53.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
53.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
53.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
53.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
53.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
53.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
53.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
52.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
52.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
52.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
52.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
52.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
52.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
52.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
52.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
52.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
52.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
52.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
51.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
51.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
51.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
51.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
51.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
51.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
51.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
50.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
50.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
50.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
50.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
50.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
50.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
50.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
50.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
50.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
50.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
50.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
50.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
50.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
50.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
49.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
49.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
49.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
49.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
49.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
49.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
49.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
49.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
49.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
49.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
49.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
49.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
49.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
49.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
49.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
49.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
49.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
49.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
49.0
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
48.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
48.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
48.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
48.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
48.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
48.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
48.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
48.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
48.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
48.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
48.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
48.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
48.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
47.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
47.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
47.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
47.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
47.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
47.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
47.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
47.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
47.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
47.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
46.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
46.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
46.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
46.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
46.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
46.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
46.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
46.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
46.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
46.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
46.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
46.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
45.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
45.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
45.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
45.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
45.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
45.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
45.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
44.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
44.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
44.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
44.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
44.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
44.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
44.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
44.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
43.9
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
43.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
43.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
43.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
43.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
43.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
43.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
43.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
43.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
43.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
43.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
42.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
42.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
42.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
42.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
42.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
42.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
42.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
42.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
42.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
42.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
41.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
41.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
41.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
41.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
41.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
40.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
40.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
40.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
39.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
39.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
39.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
39.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
39.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
39.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
39.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
39.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
39.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
39.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
38.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
38.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
38.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
38.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
38.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
38.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
38.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
38.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
38.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
38.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
38.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
37.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
37.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
37.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
37.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
37.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
37.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
37.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
36.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
36.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
36.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
36.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
36.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
36.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
35.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
35.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
35.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
35.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
35.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
35.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
34.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
34.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
34.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
34.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
34.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
33.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
33.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
33.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
33.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
33.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
33.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
32.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
32.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
32.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
31.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
31.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
31.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
31.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
30.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
30.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
30.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
30.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
30.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
29.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
29.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
29.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
29.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
29.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
28.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
28.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
28.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
26.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
26.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
25.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
25.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
24.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
24.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
24.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
24.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
23.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
22.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
22.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
21.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
20.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
20.0
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
19.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
18.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
17.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
17.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
15.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
15.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
14.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YPEL5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
62.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
98.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
97.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
90.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
90.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
88.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
88.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
88.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
86.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
85.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
83.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
82.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
82.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
81.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
80.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
80.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
79.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
78.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
78.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
76.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
76.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
76.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
75.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
73.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
72.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
71.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
71.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
70.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
70.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
70.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
70.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
70.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
70.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
70.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
70.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
69.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
68.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
67.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
67.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
67.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
66.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
66.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
66.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
64.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
64.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
63.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
63.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
63.3
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
62.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
62.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
62.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
60.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
60.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
60.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
60.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
60.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
60.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
60.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
59.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
59.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
58.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
57.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
57.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
56.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
56.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
56.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
56.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
56.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
56.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
55.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
55.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
55.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
55.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
55.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
53.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
53.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
53.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
51.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
51.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
50.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
50.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
49.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
48.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
48.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
47.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
47.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
46.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
46.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
45.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
45.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
44.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
44.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
43.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
43.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
42.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
40.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
39.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
38.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
38.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
31.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
YPEL5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
150.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
116.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
111.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
101.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
100.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
97.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
93.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
92.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
91.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
88.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
87.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
84.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
83.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
82.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
81.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
81.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
81.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
80.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
79.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
78.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
78.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
77.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
77.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
76.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
75.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
75.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
74.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
74.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
74.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
74.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
72.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
71.4
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
70.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
70.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
69.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
69.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
69.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
69.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
68.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
67.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
67.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
67.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
66.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
66.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
66.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
65.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
65.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
63.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
63.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
63.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
62.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
61.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
61.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
60.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
60.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
60.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
59.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
58.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
58.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
57.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
57.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
56.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
56.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
56.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
55.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
55.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
55.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
55.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
54.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
54.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
54.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
54.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
54.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
54.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
54.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
53.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
53.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
52.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
52.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
52.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
52.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
52.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
51.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
51.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
51.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
51.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
50.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
50.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
50.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
50.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
50.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
50.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
50.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
49.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
49.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
49.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
49.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
49.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
49.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
48.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
48.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
47.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
47.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
47.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
47.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
47.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
47.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
46.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
46.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
46.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
46.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
46.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
46.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
46.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
46.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
45.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
45.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
45.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
45.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
45.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
44.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
44.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
44.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
44.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
44.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
44.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
44.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
44.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
43.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
43.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
43.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
43.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
43.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
42.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
42.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
42.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
42.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
42.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
42.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
41.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
41.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
41.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
41.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
40.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
40.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
40.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
40.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
40.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
40.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
40.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
40.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
40.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
40.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
39.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
39.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
39.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
39.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
39.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
39.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
39.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
39.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
39.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
39.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
38.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
38.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
38.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
38.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
38.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
38.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
38.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
37.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
37.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
37.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
37.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
37.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
37.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
37.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
36.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
36.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
36.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
36.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
36.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
36.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
36.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
36.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
36.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
35.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
35.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
35.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
35.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
34.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
34.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
34.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
34.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
33.9
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
33.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
33.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
33.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
33.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
32.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
32.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
32.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
32.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
32.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
32.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
32.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
32.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
32.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
31.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
31.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
31.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
31.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
31.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
30.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
30.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
30.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
30.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
30.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
30.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
30.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
30.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
30.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
29.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
29.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
29.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
29.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
29.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
28.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
28.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
28.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
28.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
28.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
28.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
28.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
27.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
27.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
27.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
27.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
25.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
25.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
25.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
25.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
24.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
24.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
24.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
24.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
23.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
23.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
23.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
22.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
22.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
22.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
21.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
21.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
21.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
21.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
21.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
21.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
20.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
20.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
20.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
20.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
20.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
20.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
19.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
19.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
19.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
19.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
18.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
18.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
18.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
17.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
15.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
14.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
13.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
13.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
13.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
9.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
6.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078530001
Normal
0.9
CPT0001340003
Tumor
0.8
CPT0088550004
Tumor
0.7
CPT0066480003
Tumor
0.6
CPT0092790003
Tumor
0.6
CPT0065810003
Tumor
0.6
CPT0015730003
Tumor
0.6
CPT0011240003
Tumor
0.5
CPT0076330003
Tumor
0.5
CPT0012550003
Tumor
0.5
CPT0012900004
Tumor
0.5
CPT0065930003
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0079180003
Tumor
0.5
CPT0063320003
Tumor
0.4
CPT0086950003
Tumor
0.4
CPT0002350011
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0078510003
Tumor
0.4
CPT0089460004
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0000780007
Tumor
0.4
CPT0086360003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0018250001
Normal
0.3
CPT0087040003
Tumor
0.3
CPT0012570003
Normal
0.3
CPT0077310003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0006900003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0025060001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0078840001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0012770003
Normal
0.2
CPT0076350001
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0088970003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0088480003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0088780001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0007870001
Normal
0.1
CPT0012280003
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0089040001
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0078660003
Tumor
0.1
CPT0025290003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0025580004
Tumor
0.1
CPT0075570001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0012640003
Normal
0.0
CPT0078940001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0020130001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0092190003
Normal
0.0
CPT0023710001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0001350001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0063330001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0024670003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0001180009
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0069160003
Tumor
-0.1
CPT0065430003
Tumor
-0.2
CPT0087050003
Normal
-0.2
CPT0092160003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0023350003
Tumor
-0.2
CPT0001540009
Tumor
-0.2
CPT0009080003
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0026420001
Normal
-0.2
CPT0086870003
Tumor
-0.2
CPT0009020003
Normal
-0.2
CPT0019160001
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0020120003
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0017450001
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0065450001
Normal
-0.3
CPT0092730003
Tumor
-0.3
CPT0079000001
Normal
-0.3
CPT0009060003
Tumor
-0.3
CPT0012180003
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0001510001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0077320001
Normal
-0.3
CPT0078990003
Tumor
-0.3
CPT0065820001
Normal
-0.3
CPT0079430001
Normal
-0.4
CPT0025230003
Tumor
-0.4
CPT0086370003
Normal
-0.4
CPT0019130003
Tumor
-0.4
CPT0012920003
Normal
-0.4
CPT0023360001
Normal
-0.4
CPT0025110003
Tumor
-0.5
CPT0000890001
Normal
-0.5
CPT0023690003
Tumor
-0.5
CPT0092290003
Tumor
-0.5
CPT0078800003
Tumor
-0.6
CPT0014370004
Tumor
-0.6
CPT0066520001
Normal
-0.6
CPT0092800003
Normal
-0.6
CPT0014160003
Tumor
-0.6
CPT0079230003
Tumor
-0.7
CPT0085670003
Tumor
-0.7
CPT0006630003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
