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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAPKAP1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
79.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
77.4
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
75.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
73.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
72.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
71.8
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
68.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
68.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
66.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
62.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
59.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
54.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
53.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
53.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
52.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
52.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
52.2
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
52.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
51.9
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
51.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
50.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
50.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
50.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
50.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
49.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
49.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
48.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
48.3
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
47.8
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
47.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
46.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
46.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
46.5
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
46.4
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
46.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
46.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
45.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
45.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
45.5
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
45.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
45.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
45.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
44.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
44.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
44.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
44.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
44.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
44.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
44.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
43.6
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
43.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
43.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
42.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
42.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
42.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
42.7
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
42.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
42.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
42.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
42.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
42.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
42.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
41.8
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
41.7
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
41.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
41.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
41.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
41.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
41.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
41.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
41.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
41.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
40.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
40.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
40.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
40.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
40.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
40.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
39.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
39.7
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
39.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
39.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
39.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
39.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
39.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
39.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
38.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
38.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
38.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
38.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
38.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
37.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
37.8
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
37.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
37.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
37.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
37.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
37.0
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
36.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
36.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
36.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
36.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
36.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
36.3
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
36.2
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
36.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
36.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
36.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
36.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
35.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
35.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
35.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
35.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
35.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
35.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
35.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
34.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
34.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
34.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
34.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
34.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
34.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
34.5
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
34.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
34.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
34.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
34.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
34.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
33.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
33.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
33.8
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
33.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
33.8
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
33.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
33.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
33.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
33.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
33.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
33.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
33.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
32.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
32.9
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
32.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
32.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
32.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
32.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
32.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
32.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
32.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
32.5
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
32.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
32.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
32.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
32.2
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
32.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
32.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
32.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
32.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
32.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
32.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
32.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
32.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
32.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
31.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
31.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
31.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
31.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
31.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
31.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
31.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
31.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
31.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
31.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
30.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
30.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
30.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
30.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
30.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
30.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
30.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
30.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
30.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
30.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
30.4
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
30.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
30.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
29.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
29.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
29.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
29.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
29.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
29.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
29.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
29.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
29.4
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
29.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
29.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
29.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
29.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
29.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
29.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
28.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
28.9
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
28.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
28.7
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
28.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
28.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
28.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
28.3
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
28.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
28.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
27.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
27.9
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
27.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
27.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
27.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
27.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
27.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
27.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
27.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
27.5
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
27.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
27.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
27.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
27.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
27.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
27.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
27.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
27.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
27.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
26.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
26.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
26.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
26.8
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
26.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
26.7
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
26.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
26.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
26.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
26.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
26.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
26.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
26.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
26.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
26.1
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
26.1
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
26.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
25.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
25.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
25.6
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
25.4
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
25.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
25.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
25.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
25.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
25.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
25.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
25.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
25.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
24.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
24.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
24.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
24.6
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
24.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
24.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
24.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
24.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
24.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
24.1
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
24.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
24.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
23.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
23.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
23.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
23.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
23.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
23.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
23.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
23.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
23.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
23.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
23.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
23.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
23.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
23.3
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
23.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
23.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
23.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
23.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
23.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
22.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
22.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
22.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
22.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
22.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
22.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
22.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
22.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
21.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
21.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
21.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
21.4
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
21.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
21.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
21.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
21.1
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
21.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
20.9
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
20.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
20.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
20.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
20.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
20.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
20.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
20.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
20.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
20.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
20.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
20.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
20.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
19.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
19.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
19.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
19.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
19.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
19.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
19.0
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
19.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
19.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
18.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
18.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
18.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
18.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
18.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
18.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
18.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
18.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
17.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
17.7
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
17.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
17.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
17.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
17.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
17.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
17.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
17.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
16.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
16.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
16.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
16.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
15.8
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
15.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
15.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
15.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
15.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
15.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
14.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
14.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
13.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
13.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
12.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MAPKAP1 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.6
Number of samples
231
Samples
Sample
Description
TPM
DO45193
0 years, female, NA, stage:4, dead, 120 days
41.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
39.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
39.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
36.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
36.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
35.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
35.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
33.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
33.7
DO50799
0 years, female, NA, stage:2, alive, 540 days
33.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
33.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
32.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
32.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
32.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
31.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
31.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
30.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
29.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
29.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
28.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
28.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
27.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
27.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
27.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
27.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
26.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
26.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
26.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
26.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
25.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
25.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
23.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
23.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
23.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
23.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
23.0
DO50809
0 years, male, NA, stage:3, dead, 720 days
22.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
22.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
22.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
22.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
22.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
22.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
22.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
22.6
DO48741
0 years, male, NA, stage:3, alive, 240 days
22.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
22.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
22.0
DO48737
0 years, male, NA, stage:1, alive, 720 days
21.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
21.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
21.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
21.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
21.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
21.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
21.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
21.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
20.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
20.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
20.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
20.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
20.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
20.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
20.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
20.4
DO23535
0 years, male, NA, stage:1, alive, 960 days
20.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
20.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
19.9
DO45171
0 years, male, NA, stage:3, alive, 600 days
19.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
19.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
19.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
19.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
19.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
19.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
19.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
19.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
18.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
18.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
18.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
18.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
18.5
DO45091
0 years, male, NA, stage:2, dead, 1320 days
18.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
18.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
18.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
18.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
18.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
18.2
DO50785
0 years, male, NA, stage:4, dead, 90 days
18.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
17.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
17.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
17.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
17.8
DO23519
0 years, male, NA, stage:3, alive, 630 days
17.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
17.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
17.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
17.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
17.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
17.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
17.4
DO50807
0 years, male, NA, stage:1, alive, 540 days
17.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
17.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
17.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
17.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
17.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
16.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
16.8
DO45135
0 years, male, NA, stage:1, alive, 1410 days
16.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
16.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
16.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
16.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
16.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
16.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
16.6
DO45163
0 years, male, NA, stage:2, alive, 960 days
16.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
16.4
DO23521
0 years, male, NA, stage:3, alive, 1110 days
16.4
DO45157
0 years, male, NA, stage:2, alive, 1980 days
16.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
16.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
16.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
16.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
16.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
16.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
16.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
16.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
15.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
15.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
15.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
15.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
15.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
15.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
15.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
15.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
15.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
15.5
DO50813
0 years, male, NA, stage:2, alive, 420 days
15.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
15.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
15.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
15.3
DO45251
0 years, female, NA, stage:2, alive, 900 days
15.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
15.2
DO50815
0 years, male, NA, stage:3, alive, 150 days
15.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
15.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
15.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
15.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
14.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
14.9
DO23514
0 years, male, NA, stage:2, alive, 1290 days
14.9
DO48704
0 years, female, NA, stage:3, alive, 750 days
14.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
14.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
14.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
14.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
14.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
14.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
14.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
14.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
14.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
14.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
14.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
14.3
DO45233
0 years, male, NA, stage:3, alive, 900 days
14.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
14.2
DO45185
0 years, male, NA, stage:2, alive, 600 days
14.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
14.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
14.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
13.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
13.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
13.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
13.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
13.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
13.7
DO45255
0 years, male, NA, stage:3, alive, 720 days
13.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
13.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
13.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
13.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
13.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
13.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
13.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
13.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
13.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
13.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
13.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
13.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
12.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
12.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
12.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
12.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
12.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
12.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
12.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
11.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
11.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
11.6
DO48693
0 years, male, NA, stage:2, alive, 900 days
11.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
11.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
11.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
11.3
DO45105
0 years, male, NA, stage:1, alive, 1680 days
11.3
DO45201
0 years, male, NA, stage:1, alive, 900 days
11.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
11.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
10.9
DO45257
0 years, male, NA, stage:3, alive, 810 days
10.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
10.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
10.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
10.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
10.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
10.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
10.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
10.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
9.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
9.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
9.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
9.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
9.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
9.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
9.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
9.1
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
9.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
9.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
8.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
8.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
8.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
8.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
8.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
8.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
8.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
7.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
7.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
7.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
6.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
6.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
6.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
6.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
425
Tumor
0.8
671
Tumor
0.6
487
Tumor
0.6
635
Tumor
0.5
523
Tumor
0.5
743
Tumor
0.5
131
Tumor
0.5
517
Tumor
0.5
572
Normal
0.4
884
Normal
0.4
573
Tumor
0.4
636
Normal
0.4
745
Tumor
0.4
491
Tumor
0.4
564
Normal
0.4
617
Tumor
0.4
742
Normal
0.4
1014
Normal
0.4
192
Normal
0.4
1025
Tumor
0.4
558
Normal
0.4
937
Tumor
0.4
484
Normal
0.4
878
Normal
0.4
628
Normal
0.4
545
Tumor
0.4
984
Normal
0.4
913
Tumor
0.4
147
Tumor
0.4
882
Normal
0.3
785
Tumor
0.3
912
Normal
0.3
983
Tumor
0.3
488
Normal
0.3
497
Tumor
0.3
546
Normal
0.3
696
Normal
0.3
982
Normal
0.3
1016
Normal
0.3
967
Tumor
0.3
367
Tumor
0.3
881
Tumor
0.3
375
Tumor
0.3
686
Normal
0.3
616
Normal
0.3
494
Normal
0.3
818
Normal
0.3
424
Normal
0.3
824
Normal
0.3
343
Tumor
0.3
981
Tumor
0.3
1032
Normal
0.3
135
Tumor
0.3
978
Normal
0.3
196
Normal
0.3
755
Tumor
0.3
815
Tumor
0.3
568
Normal
0.3
414
Normal
0.3
716
Normal
0.3
641
Tumor
0.3
1022
Normal
0.3
966
Normal
0.3
534
Normal
0.2
922
Normal
0.2
786
Normal
0.2
817
Tumor
0.2
113
Tumor
0.2
756
Normal
0.2
1043
Tumor
0.2
524
Normal
0.2
422
Normal
0.2
142
Normal
0.2
618
Normal
0.2
813
Tumor
0.2
528
Normal
0.2
695
Tumor
0.2
924
Normal
0.2
463
Tumor
0.2
383
Tumor
0.2
567
Tumor
0.2
746
Normal
0.2
498
Normal
0.2
778
Normal
0.2
697
Tumor
0.2
975
Tumor
0.2
1042
Normal
0.2
161
Tumor
0.2
444
Normal
0.2
492
Normal
0.2
977
Tumor
0.2
514
Normal
0.2
916
Normal
0.2
1045
Tumor
0.2
261
Tumor
0.2
145
Tumor
0.2
228
Normal
0.2
662
Normal
0.2
111
Normal
0.2
574
Normal
0.2
715
Tumor
0.2
1026
Normal
0.2
428
Normal
0.2
852
Normal
0.2
923
Tumor
0.2
283
Tumor
0.2
664
Normal
0.2
431
Tumor
0.2
191
Tumor
0.2
426
Normal
0.2
713
Tumor
0.2
648
Normal
0.2
446
Normal
0.2
777
Tumor
0.2
395
Tumor
0.2
665
Tumor
0.2
714
Normal
0.2
698
Normal
0.2
217
Tumor
0.2
368
Normal
0.2
284
Normal
0.2
222
Normal
0.2
721
Tumor
0.1
526
Normal
0.1
224
Normal
0.1
722
Normal
0.1
964
Normal
0.1
615
Tumor
0.1
968
Normal
0.1
865
Tumor
0.1
187
Tumor
0.1
851
Tumor
0.1
132
Normal
0.1
952
Normal
0.1
728
Normal
0.1
571
Tumor
0.1
816
Normal
0.1
518
Normal
0.1
286
Normal
0.1
858
Normal
0.1
214
Normal
0.1
958
Normal
0.1
267
Tumor
0.1
436
Normal
0.1
553
Tumor
0.1
432
Normal
0.1
227
Tumor
0.1
447
Tumor
0.1
554
Normal
0.1
672
Normal
0.1
666
Normal
0.1
421
Tumor
0.1
536
Normal
0.1
1028
Normal
0.1
862
Normal
0.1
114
Normal
0.1
516
Normal
0.1
1021
Tumor
0.1
128
Normal
0.1
146
Normal
0.1
126
Normal
0.1
285
Tumor
0.1
1031
Tumor
0.1
926
Normal
0.1
433
Tumor
0.1
423
Tumor
0.1
448
Normal
0.1
127
Tumor
0.1
257
Tumor
0.1
557
Tumor
0.1
434
Normal
0.1
445
Tumor
0.1
535
Tumor
0.1
298
Normal
0.1
136
Normal
0.1
138
Normal
0.1
738
Normal
0.1
171
Tumor
0.1
483
Tumor
0.1
563
Tumor
0.1
954
Normal
0.1
642
Normal
0.1
1041
Tumor
0.1
921
Tumor
0.1
1044
Normal
0.1
391
Tumor
0.1
141
Tumor
0.1
627
Tumor
0.1
883
Tumor
0.1
443
Tumor
0.1
376
Normal
0.1
823
Tumor
0.1
366
Normal
0.1
918
Normal
0.1
186
Normal
0.1
396
Normal
0.1
125
Tumor
0.1
123
Tumor
0.0
1046
Normal
0.0
361
Tumor
0.0
493
Tumor
0.0
385
Tumor
0.0
384
Normal
0.0
538
Normal
0.0
185
Tumor
0.0
1027
Tumor
0.0
744
Normal
0.0
188
Normal
0.0
944
Normal
0.0
413
Tumor
0.0
814
Normal
0.0
312
Normal
0.0
221
Tumor
0.0
1013
Tumor
0.0
513
Tumor
0.0
162
Normal
0.0
465
Tumor
0.0
537
Tumor
0.0
388
Normal
0.0
148
Normal
0.0
362
Normal
0.0
976
Normal
0.0
471
Tumor
0.0
867
Tumor
0.0
332
Normal
0.0
911
Tumor
0.0
393
Tumor
0.0
647
Tumor
0.0
866
Normal
0.0
464
Normal
0.0
314
Normal
0.0
467
Tumor
0.0
172
Normal
0.0
232
Normal
0.0
212
Normal
0.0
864
Normal
0.0
124
Normal
0.0
415
Tumor
0.0
262
Normal
0.0
877
Tumor
0.0
917
Tumor
0.0
477
Tumor
0.0
914
Normal
0.0
661
Tumor
0.0
218
Normal
0.0
462
Normal
0.0
951
Tumor
0.0
258
Normal
0.0
272
Normal
0.0
456
Normal
0.0
271
Tumor
0.0
868
Normal
0.0
957
Tumor
-0.1
963
Tumor
-0.1
137
Tumor
-0.1
925
Tumor
-0.1
195
Tumor
-0.1
277
Tumor
-0.1
297
Tumor
-0.1
331
Tumor
-0.1
213
Tumor
-0.1
953
Tumor
-0.1
737
Tumor
-0.1
874
Normal
-0.1
311
Tumor
-0.1
363
Tumor
-0.1
392
Normal
-0.1
724
Normal
-0.1
112
Tumor
-0.1
365
Tumor
-0.1
1015
Tumor
-0.1
533
Tumor
-0.1
873
Tumor
-0.1
278
Normal
-0.1
386
Normal
-0.1
915
Tumor
-0.1
412
Normal
-0.1
353
Tumor
-0.1
416
Normal
-0.1
352
Normal
-0.1
427
Tumor
-0.1
965
Tumor
-0.1
394
Normal
-0.1
474
Normal
-0.1
355
Tumor
-0.1
268
Normal
-0.1
482
Normal
-0.1
472
Normal
-0.1
527
Tumor
-0.1
354
Normal
-0.1
451
Tumor
-0.1
356
Normal
-0.1
956
Normal
-0.1
478
Normal
-0.2
211
Tumor
-0.2
525
Tumor
-0.2
435
Tumor
-0.2
364
Normal
-0.2
223
Tumor
-0.2
861
Tumor
-0.2
857
Tumor
-0.2
723
Tumor
-0.2
344
Normal
-0.2
455
Tumor
-0.2
468
Normal
-0.2
943
Tumor
-0.2
663
Tumor
-0.2
328
Normal
-0.2
327
Tumor
-0.2
515
Tumor
-0.2
741
Tumor
-0.2
358
Normal
-0.2
938
Normal
-0.3
351
Tumor
-0.3
341
Tumor
-0.3
461
Tumor
-0.3
313
Tumor
-0.3
411
Tumor
-0.3
863
Tumor
-0.3
466
Normal
-0.3
955
Tumor
-0.4
727
Tumor
-0.4
387
Tumor
-0.4
481
Tumor
-0.4
342
Normal
-0.4
231
Tumor
-0.4
685
Tumor
-0.4
452
Normal
-0.4
473
Tumor
-0.5
357
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
