HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:18.0 nTPM
HPA Brain:24.3 nTPM
GTEx:18.0 nTPM
FANTOM5:5.1 Scaled Tags Per Million
Pig:9.4 nTPM
Mouse:0.5 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 24.3
Sample id Sample description nTPM
Hippocampus
nTPM: 18.8
1911 Female, age 85, right hemisphere 21.4
2529 Female, age 94, left hemisphere 20.9
2621 Female, age 67, right hemisphere 19.9
2148 Female, age 91, left hemisphere 18.5
1898 Male, age 80, left hemisphere 16.2
1855 Male, age 76, left hemisphere 15.7
Dentate gyrus
nTPM: 19.5
2530 Female, age 94, left hemisphere 24.4
2531 Female, age 67, both hemispheres 22.9
2528 Male, age 74, both hemispheres 20.1
2010 Male, age 76, both hemispheres 17.7
2246 Female, age 85, both hemispheres 17.1
1927 Female, age 91, both hemispheres 14.9
Entorhinal gyrus
nTPM: 21.2
2117 Female, age 91, right hemisphere 27.2
2686 Male, age 75, right hemisphere 23.0
2764 Male, age 80, right hemisphere 22.4
2613 Female, age 94, left hemisphere 19.6
1938 Female, age 85, left hemisphere 18.5
1787 Male, age 76, left hemisphere 16.6
Hippocampus, CA1
nTPM: 15.6
2082 Female, age 91, right hemisphere 19.6
1873 Female, age 85, both hemispheres 18.1
2527 Male, age 74, both hemispheres 17.9
2045 Male, age 76, both hemispheres 11.1
2749 Male, age 80, left hemisphere 11.1
Hippocampus, CA2
nTPM: 18.5
2437 Female, age 94, left hemisphere 20.6
1940 Female, age 85, left hemisphere 20.5
1963 Male, age 80, left hemisphere 19.8
2249 Male, age 74, both hemispheres 19.2
2113 Female, age 91, right hemisphere 17.5
1892 Male, age 76, both hemispheres 13.3
Hippocampus, CA3
nTPM: 19.6
1891 Female, age 85, both hemispheres 26.8
2620 Female, age 94, left hemisphere 23.5
2861 Female, age 67, both hemispheres 23.0
1867 Male, age 76, both hemispheres 15.7
2436 Male, age 74, both hemispheres 14.3
2137 Male, age 80, left hemisphere 14.0
Parahippocampal cortex
nTPM: 18.2
2692 Male, age 74, both hemispheres 24.1
1990 Female, age 91, right hemisphere 21.9
2532 Female, age 72, left hemisphere 19.2
2018 Male, age 76, both hemispheres 18.1
2622 Female, age 67, right hemisphere 17.7
1933 Female, age 85, both hemispheres 17.0
1850 Male, age 80, both hemispheres 16.4
2245 Female, age 91, both hemispheres 16.3
2693 Female, age 94, both hemispheres 16.1
2250 Female, age 67, right hemisphere 15.7
Perirhinal gyrus
nTPM: 13.7
1841 Female, age 85, right hemisphere 14.7
2848 Male, age 76, right hemisphere 14.2
1847 Female, age 91, left hemisphere 13.5
2521 Female, age 94, right hemisphere 13.4
1794 Male, age 80, right hemisphere 12.7
Subiculum
nTPM: 24.3
2042 Male, age 76, both hemispheres 33.4
1901 Male, age 80, both hemispheres 27.2
2619 Male, age 74, both hemispheres 23.0
2438 Female, age 94, left hemisphere 22.9
1977 Female, age 85, both hemispheres 21.5
2729 Female, age 91, right hemisphere 17.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 18.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.0
Samples: 197

Max nTPM: 45.0
Min nTPM: 8.4
Std nTPM: 6.3
Median nTPM: 16.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 45.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 40.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 38.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 34.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 34.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 33.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 33.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 32.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 32.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 32.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 32.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 5.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 5.1
FF:10153-102I9 76 years, female 7.1
FF:10169-103B7 60 years, female 3.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 9.4
Pig sample Sample description nTPM
Subiculum
nTPM: 9.1
Samples: 4

Max nTPM: 9.6
Min nTPM: 8.7
Sample A Female 9.0
Sample B Female 9.6
Sample C Male 9.2
Sample D Male 8.7
Dorsal hippocampus
nTPM: 8.2
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.7
Sample A Female 7.7
Sample B Female 8.0
Sample C Male 8.3
Sample D Male 8.7
Entorhinal cortex
nTPM: 8.0
Samples: 4

Max nTPM: 8.6
Min nTPM: 7.5
Sample A Female 8.2
Sample B Female 7.6
Sample C Male 8.6
Sample D Male 7.5
Ventral hippocampus
nTPM: 9.5
Samples: 4

Max nTPM: 11.5
Min nTPM: 8.6
Sample A Female 8.6
Sample B Female 9.1
Sample C Male 11.5
Sample D Male 8.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 0.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.4
Samples: 4

Max nTPM: 0.7
Min nTPM: 0.3
Sample A Male 0.3
Sample B Male 0.3
Sample C Female 0.3
Sample D Female 0.7
Hippocampal formation
nTPM: 0.5
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.2
Sample A Male 0.4
Sample B Male 0.3
Sample C Female 0.2
Sample D Female 1.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68157404 Antisense, RP_041116_02_E09, Mouse strain C57BL/6J (56 days, male) 0.1

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