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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DYNC2I2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
60.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
59.7
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
50.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
50.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
45.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
44.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
42.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
35.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
35.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
35.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
34.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
34.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
33.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
32.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
31.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
31.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
30.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
29.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
28.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
28.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
27.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
27.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
27.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
26.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
26.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
25.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
25.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
25.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
24.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
24.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
24.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
24.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
23.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
23.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
23.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
22.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
22.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
22.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
21.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
21.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
21.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
20.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
20.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
20.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
19.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
19.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
19.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
19.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
19.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
18.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
18.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
17.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
16.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
14.7
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
14.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
14.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
14.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
12.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
12.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
11.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
11.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DYNC2I2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
235.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
116.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
113.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
109.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
97.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
92.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
82.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
79.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
78.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
78.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
77.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
76.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
76.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
74.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
73.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
72.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
72.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
71.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
71.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
70.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
70.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
69.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
69.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
68.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
67.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
67.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
67.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
67.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
65.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
65.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
65.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
65.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
65.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
64.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
64.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
64.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
64.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
63.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
63.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
62.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
62.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
62.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
61.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
61.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
61.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
61.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
61.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
60.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
60.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
60.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
60.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
60.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
60.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
60.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
59.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
59.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
59.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
59.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
59.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
58.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
58.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
58.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
58.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
58.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
57.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
57.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
57.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
57.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
56.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
56.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
56.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
56.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
56.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
56.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
56.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
55.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
55.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
55.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
55.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
55.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
55.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
55.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
54.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
54.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
54.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
54.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
54.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
54.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
54.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
53.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
53.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
53.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
53.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
53.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
53.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
53.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
53.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
53.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
52.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
52.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
52.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
52.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
52.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
52.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
52.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
52.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
52.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
52.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
51.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
51.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
51.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
51.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
51.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
51.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
51.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
51.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
51.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
51.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
51.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
51.5
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
51.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
51.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
51.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
51.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
51.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
51.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
50.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
50.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
50.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
50.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
50.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
50.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
50.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
49.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
49.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
49.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
49.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
49.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
49.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
49.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
49.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
48.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
48.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
48.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
48.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
48.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
48.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
48.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
48.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
48.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
47.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
47.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
47.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
47.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
47.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
47.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
47.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
47.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
47.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
47.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
47.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
47.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
47.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
47.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
46.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
46.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
46.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
46.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
46.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
46.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
46.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
46.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
45.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
45.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
45.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
45.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
45.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
45.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
45.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
45.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
45.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
45.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
45.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
45.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
44.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
44.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
44.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
44.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
44.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
44.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
44.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
44.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
44.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
43.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
43.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
43.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
43.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
43.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
43.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
43.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
43.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
43.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
43.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
43.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
42.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
42.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
42.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
42.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
42.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
42.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
42.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
42.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
42.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
42.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
42.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
42.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
42.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
42.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
42.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
42.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
41.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
41.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
41.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
41.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
41.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
41.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
41.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
41.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
40.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
40.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
40.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
40.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
40.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
40.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
40.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
40.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
40.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
40.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
40.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
40.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
40.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
40.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
40.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
40.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
39.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
39.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
39.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
39.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
39.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
39.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
39.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
39.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
39.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
39.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
39.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
39.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
39.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
39.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
39.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
39.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
39.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
39.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
39.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
38.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
38.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
38.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
38.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
38.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
38.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
38.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
38.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
38.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
38.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
38.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
38.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
38.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
37.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
37.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
37.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
37.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
37.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
37.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
37.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
37.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
37.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
37.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
37.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
37.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
36.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
36.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
36.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
36.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
36.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
36.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
36.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
36.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
36.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
36.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
36.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
36.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
36.2
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
36.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
35.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
35.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
35.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
35.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
35.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
35.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
35.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
35.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
35.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
35.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
35.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
35.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
34.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
34.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
34.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
34.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
34.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
34.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
34.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
34.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
34.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
34.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
33.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
33.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
33.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
33.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
33.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
33.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
33.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
33.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
32.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
32.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
32.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
32.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
32.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
32.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
32.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
32.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
32.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
32.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
32.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
31.9
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
31.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
31.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
31.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
31.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
31.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
31.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
31.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
31.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
31.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
31.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
31.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
31.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
31.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
31.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
30.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
30.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
30.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
30.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
30.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
30.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
30.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
30.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
29.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
29.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
29.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
29.8
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
29.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
29.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
29.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
29.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
29.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
29.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
29.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
29.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
29.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
29.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
28.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
28.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
28.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
28.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
28.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
28.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
28.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
28.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
27.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
27.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
27.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
27.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
27.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
27.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
27.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
27.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
27.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
27.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
27.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
27.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
26.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
26.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
26.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
26.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
26.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
26.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
26.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
26.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
26.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
26.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
26.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
26.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
26.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
25.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
25.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
25.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
25.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
25.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
25.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
25.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
25.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
25.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
25.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
25.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
25.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
24.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
24.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
24.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
24.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
24.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
24.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
24.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
24.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
24.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
24.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
24.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
23.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
23.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
23.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
23.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
23.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
23.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
23.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
23.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
23.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
22.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
22.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
22.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
22.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
22.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
22.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
22.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
22.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
22.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
22.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
21.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
21.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
21.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
21.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
21.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
21.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
21.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
21.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
20.9
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
20.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
20.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
20.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
20.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
20.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
20.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
19.9
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
19.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
19.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
18.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
18.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
18.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
18.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
18.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
18.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
17.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
17.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
17.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
17.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
16.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
16.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
16.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
16.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
15.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
15.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
15.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
15.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
14.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
14.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
14.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
14.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
13.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
13.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
13.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
13.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
12.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
12.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
11.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
11.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
11.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
10.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
10.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
10.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
9.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
8.6
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
2.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DYNC2I2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
94.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
73.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
67.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
66.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
63.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
61.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
61.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
59.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
59.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
57.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
57.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
56.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
56.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
55.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
53.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
53.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
52.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
52.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
52.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
51.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
51.1
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
50.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
50.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
50.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
50.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
50.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
48.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
48.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
47.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
47.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
47.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
46.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
45.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
45.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
45.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
44.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
44.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
44.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
42.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
42.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
42.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
41.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
41.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
41.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
41.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
40.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
40.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
40.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
39.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
39.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
39.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
38.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
37.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
36.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
36.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
36.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
36.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
35.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
35.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
34.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
33.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
33.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
33.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
33.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
32.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
31.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
31.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
30.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
30.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
30.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
29.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
28.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
28.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
27.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
27.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
26.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
26.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
25.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
25.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
25.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
25.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
24.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
23.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
23.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
23.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
22.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
21.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
21.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
20.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
20.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
19.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
18.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
18.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
15.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
14.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
13.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
12.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
DYNC2I2 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
62.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
164.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
161.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
145.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
142.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
141.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
131.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
131.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
130.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
124.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
122.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
112.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
109.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
108.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
105.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
104.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
102.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
102.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
102.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
101.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
101.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
100.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
100.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
100.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
98.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
97.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
96.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
96.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
96.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
95.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
95.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
94.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
93.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
93.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
93.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
93.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
92.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
91.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
90.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
90.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
90.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
90.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
89.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
88.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
88.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
88.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
88.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
87.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
87.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
87.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
87.1
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
85.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
85.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
85.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
85.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
83.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
83.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
83.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
83.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
82.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
82.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
82.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
82.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
82.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
80.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
80.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
80.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
79.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
79.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
78.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
78.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
78.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
78.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
77.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
77.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
77.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
76.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
76.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
76.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
76.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
75.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
75.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
75.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
75.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
74.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
74.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
73.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
73.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
73.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
73.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
72.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
71.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
71.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
71.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
71.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
71.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
70.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
70.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
70.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
69.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
69.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
69.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
69.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
69.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
69.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
69.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
69.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
68.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
68.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
68.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
68.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
68.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
67.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
67.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
67.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
67.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
66.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
66.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
66.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
66.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
65.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
64.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
64.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
64.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
64.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
63.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
62.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
62.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
62.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
61.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
61.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
61.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
60.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
60.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
60.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
60.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
60.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
60.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
60.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
60.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
60.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
60.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
60.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
59.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
58.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
58.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
58.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
58.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
58.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
58.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
57.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
57.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
56.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
56.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
56.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
56.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
56.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
56.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
55.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
55.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
55.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
55.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
55.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
54.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
54.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
54.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
54.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
54.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
53.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
53.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
53.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
53.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
52.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
52.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
52.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
52.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
52.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
51.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
51.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
51.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
50.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
50.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
50.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
50.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
49.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
49.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
49.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
48.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
48.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
48.6
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
48.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
48.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
48.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
48.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
48.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
47.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
47.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
47.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
47.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
47.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
47.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
47.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
47.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
46.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
45.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
45.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
44.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
44.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
43.7
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
43.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
43.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
43.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
43.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
42.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
42.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
42.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
42.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
41.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
41.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
40.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
40.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
40.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
39.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
38.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
38.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
38.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
37.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
37.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
37.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
37.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
36.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
36.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
36.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
36.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
36.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
35.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
34.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
34.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
33.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
33.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
33.3
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
33.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
31.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
31.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
30.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
30.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
30.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
30.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
30.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
30.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
30.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
30.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
29.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
29.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
29.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
29.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
28.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
28.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
28.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
28.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
27.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
27.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
27.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
26.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
26.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
26.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
26.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
25.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
24.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
24.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
23.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
22.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
21.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
20.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
18.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
16.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
15.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
13.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
13.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
12.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
11.4
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
9.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
