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General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.
Gene namei
Official gene symbol, which is typically a short form of the gene name, according to HGNC.
Assigned HPA protein class(es) for the encoded protein(s).
Transporters
Predicted locationi
All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.
Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.
Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).
The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.
Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.
Chromosome
2
Cytoband
p25.1
Chromosome location (bp)
9403475 - 9423528
Number of transcriptsi
Number of protein-coding transcripts from the gene as defined by Ensembl.
Useful information about the protein provided by UniProt.
Key regulator of the integrin-mediated cell-matrix interaction signaling by binding to the ITGB1 cytoplasmic tail and preventing the activation of integrin alpha-5/beta-1 (heterodimer of ITGA5 and ITGB1) by talin or FERMT1. Plays a role in cell proliferation, differentiation, spreading, adhesion and migration in the context of mineralization and bone development and angiogenesis. Stimulates cellular proliferation in a fibronectin-dependent manner. Involved in the regulation of beta-1 integrin-containing focal adhesion (FA) site dynamics by controlling its assembly rate during cell adhesion; inhibits beta-1 integrin clustering within FA by directly competing with talin TLN1, and hence stimulates osteoblast spreading and migration in a fibronectin- and/or collagen-dependent manner. Acts as a guanine nucleotide dissociation inhibitor (GDI) by regulating Rho family GTPases during integrin-mediated cell matrix adhesion; reduces the level of active GTP-bound form of both CDC42 and RAC1 GTPases upon cell adhesion to fibronectin. Stimulates the release of active CDC42 from the membranes to maintain it in an inactive cytoplasmic pool. Participates in the translocation of the Rho-associated protein kinase ROCK1 to membrane ruffles at cell leading edges of the cell membrane, leading to an increase of myoblast cell migration on laminin. Plays a role in bone mineralization at a late stage of osteoblast differentiation; modulates the dynamic formation of focal adhesions into fibrillar adhesions, which are adhesive structures responsible for fibronectin deposition and fibrillogenesis. Plays a role in blood vessel development; acts as a negative regulator of angiogenesis by attenuating endothelial cell proliferation and migration, lumen formation and sprouting angiogenesis by promoting AKT phosphorylation and inhibiting ERK1/2 phosphorylation through activation of the Notch signaling pathway. Promotes transcriptional activity of the MYC promoter....show less
Molecular function (UniProt)i
Keywords assigned by UniProt to proteins due to their particular molecular function.
Mitogen
Biological process (UniProt)i
Keywords assigned by UniProt to proteins because they are involved in a particular biological process.
The cytoplasmic domains of integrins are essential for cell adhesion. The protein encoded by this gene binds to the beta1 integrin cytoplasmic domain. The interaction between this protein and beta1 integrin is highly specific. Two isoforms of this protein are derived from alternatively spliced transcripts. The shorter form of this protein does not interact with the beta1 integrin cytoplasmic domain. The longer form is a phosphoprotein and the extent of its phosphorylation is regulated by the cell-matrix interaction, suggesting an important role of this protein during integrin-dependent cell adhesion. Several transcript variants, some protein-coding and some non-protein coding, have been found for this gene. [provided by RefSeq, Jan 2016]...show less
PROTEIN INFORMATIONi
The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.
The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.
The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.
The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
O14713 [Direct mapping] Integrin beta-1-binding protein 1
Show all
Transporters Accessory Factors Involved in Transport Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC Mapped to neXtProt neXtProt - Evidence at protein level Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014)
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GO:0001525[angiogenesis] GO:0001726[ruffle] GO:0002043[blood vessel endothelial cell proliferation involved in sprouting angiogenesis] GO:0005092[GDP-dissociation inhibitor activity] GO:0005178[integrin binding] GO:0005515[protein binding] GO:0005634[nucleus] GO:0005654[nucleoplasm] GO:0005737[cytoplasm] GO:0005829[cytosol] GO:0005856[cytoskeleton] GO:0005886[plasma membrane] GO:0006469[negative regulation of protein kinase activity] GO:0006933[negative regulation of cell adhesion involved in substrate-bound cell migration] GO:0007155[cell adhesion] GO:0007160[cell-matrix adhesion] GO:0007219[Notch signaling pathway] GO:0007229[integrin-mediated signaling pathway] GO:0008284[positive regulation of cell population proliferation] GO:0008285[negative regulation of cell population proliferation] GO:0010595[positive regulation of endothelial cell migration] GO:0010764[negative regulation of fibroblast migration] GO:0016020[membrane] GO:0016477[cell migration] GO:0016604[nuclear body] GO:0030027[lamellipodium] GO:0030154[cell differentiation] GO:0031214[biomineral tissue development] GO:0032091[negative regulation of protein binding] GO:0032148[activation of protein kinase B activity] GO:0033622[integrin activation] GO:0033628[regulation of cell adhesion mediated by integrin] GO:0034451[centriolar satellite] GO:0035148[tube formation] GO:0035556[intracellular signal transduction] GO:0035924[cellular response to vascular endothelial growth factor stimulus] GO:0042995[cell projection] GO:0043087[regulation of GTPase activity] GO:0043113[receptor clustering] GO:0044344[cellular response to fibroblast growth factor stimulus] GO:0045747[positive regulation of Notch signaling pathway] GO:0045944[positive regulation of transcription by RNA polymerase II] GO:0048471[perinuclear region of cytoplasm] GO:0051451[myoblast migration] GO:0051496[positive regulation of stress fiber assembly] GO:0051781[positive regulation of cell division] GO:0051895[negative regulation of focal adhesion assembly] GO:0051897[positive regulation of protein kinase B signaling] GO:0070373[negative regulation of ERK1 and ERK2 cascade] GO:0071944[cell periphery] GO:0072659[protein localization to plasma membrane] GO:0090051[negative regulation of cell migration involved in sprouting angiogenesis] GO:0090314[positive regulation of protein targeting to membrane] GO:0090315[negative regulation of protein targeting to membrane] GO:0097746[blood vessel diameter maintenance] GO:1900025[negative regulation of substrate adhesion-dependent cell spreading] GO:2001044[regulation of integrin-mediated signaling pathway]
O14713 [Direct mapping] Integrin beta-1-binding protein 1
Show all
Transporters Accessory Factors Involved in Transport Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC Mapped to neXtProt neXtProt - Evidence at protein level Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001525[angiogenesis] GO:0001726[ruffle] GO:0002043[blood vessel endothelial cell proliferation involved in sprouting angiogenesis] GO:0005092[GDP-dissociation inhibitor activity] GO:0005178[integrin binding] GO:0005515[protein binding] GO:0005634[nucleus] GO:0005654[nucleoplasm] GO:0005737[cytoplasm] GO:0005829[cytosol] GO:0005856[cytoskeleton] GO:0005886[plasma membrane] GO:0006469[negative regulation of protein kinase activity] GO:0006933[negative regulation of cell adhesion involved in substrate-bound cell migration] GO:0007155[cell adhesion] GO:0007160[cell-matrix adhesion] GO:0007219[Notch signaling pathway] GO:0007229[integrin-mediated signaling pathway] GO:0008284[positive regulation of cell population proliferation] GO:0008285[negative regulation of cell population proliferation] GO:0010595[positive regulation of endothelial cell migration] GO:0010764[negative regulation of fibroblast migration] GO:0016020[membrane] GO:0016477[cell migration] GO:0016604[nuclear body] GO:0019900[kinase binding] GO:0019901[protein kinase binding] GO:0030027[lamellipodium] GO:0030154[cell differentiation] GO:0031214[biomineral tissue development] GO:0032091[negative regulation of protein binding] GO:0032148[activation of protein kinase B activity] GO:0033622[integrin activation] GO:0033628[regulation of cell adhesion mediated by integrin] GO:0034451[centriolar satellite] GO:0035148[tube formation] GO:0035556[intracellular signal transduction] GO:0035924[cellular response to vascular endothelial growth factor stimulus] GO:0042995[cell projection] GO:0043087[regulation of GTPase activity] GO:0043113[receptor clustering] GO:0044344[cellular response to fibroblast growth factor stimulus] GO:0045747[positive regulation of Notch signaling pathway] GO:0045944[positive regulation of transcription by RNA polymerase II] GO:0048471[perinuclear region of cytoplasm] GO:0051451[myoblast migration] GO:0051496[positive regulation of stress fiber assembly] GO:0051781[positive regulation of cell division] GO:0051894[positive regulation of focal adhesion assembly] GO:0051895[negative regulation of focal adhesion assembly] GO:0051897[positive regulation of protein kinase B signaling] GO:0070373[negative regulation of ERK1 and ERK2 cascade] GO:0071944[cell periphery] GO:0072659[protein localization to plasma membrane] GO:0090051[negative regulation of cell migration involved in sprouting angiogenesis] GO:0090314[positive regulation of protein targeting to membrane] GO:0090315[negative regulation of protein targeting to membrane] GO:0097746[blood vessel diameter maintenance] GO:1900025[negative regulation of substrate adhesion-dependent cell spreading] GO:2001044[regulation of integrin-mediated signaling pathway]
O14713 [Direct mapping] Integrin beta-1-binding protein 1
Show all
Transporters Accessory Factors Involved in Transport Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC Mapped to neXtProt neXtProt - Evidence at protein level Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001525[angiogenesis] GO:0001726[ruffle] GO:0002043[blood vessel endothelial cell proliferation involved in sprouting angiogenesis] GO:0005092[GDP-dissociation inhibitor activity] GO:0005178[integrin binding] GO:0005515[protein binding] GO:0005634[nucleus] GO:0005654[nucleoplasm] GO:0005737[cytoplasm] GO:0005829[cytosol] GO:0005856[cytoskeleton] GO:0005886[plasma membrane] GO:0006469[negative regulation of protein kinase activity] GO:0006933[negative regulation of cell adhesion involved in substrate-bound cell migration] GO:0007155[cell adhesion] GO:0007160[cell-matrix adhesion] GO:0007219[Notch signaling pathway] GO:0007229[integrin-mediated signaling pathway] GO:0008284[positive regulation of cell population proliferation] GO:0008285[negative regulation of cell population proliferation] GO:0010595[positive regulation of endothelial cell migration] GO:0010764[negative regulation of fibroblast migration] GO:0016020[membrane] GO:0016477[cell migration] GO:0016604[nuclear body] GO:0030027[lamellipodium] GO:0030154[cell differentiation] GO:0031214[biomineral tissue development] GO:0032091[negative regulation of protein binding] GO:0032148[activation of protein kinase B activity] GO:0033622[integrin activation] GO:0033628[regulation of cell adhesion mediated by integrin] GO:0034451[centriolar satellite] GO:0035148[tube formation] GO:0035556[intracellular signal transduction] GO:0035924[cellular response to vascular endothelial growth factor stimulus] GO:0042995[cell projection] GO:0043087[regulation of GTPase activity] GO:0043113[receptor clustering] GO:0044344[cellular response to fibroblast growth factor stimulus] GO:0045747[positive regulation of Notch signaling pathway] GO:0045944[positive regulation of transcription by RNA polymerase II] GO:0048471[perinuclear region of cytoplasm] GO:0051451[myoblast migration] GO:0051496[positive regulation of stress fiber assembly] GO:0051781[positive regulation of cell division] GO:0051895[negative regulation of focal adhesion assembly] GO:0051897[positive regulation of protein kinase B signaling] GO:0070373[negative regulation of ERK1 and ERK2 cascade] GO:0071944[cell periphery] GO:0072659[protein localization to plasma membrane] GO:0090051[negative regulation of cell migration involved in sprouting angiogenesis] GO:0090314[positive regulation of protein targeting to membrane] GO:0090315[negative regulation of protein targeting to membrane] GO:0097746[blood vessel diameter maintenance] GO:1900025[negative regulation of substrate adhesion-dependent cell spreading] GO:2001044[regulation of integrin-mediated signaling pathway]
O14713 [Direct mapping] Integrin beta-1-binding protein 1
Show all
Transporters Accessory Factors Involved in Transport Predicted intracellular proteins Intracellular proteins predicted by MDM and MDSEC Mapped to neXtProt neXtProt - Evidence at protein level Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001525[angiogenesis] GO:0001726[ruffle] GO:0002043[blood vessel endothelial cell proliferation involved in sprouting angiogenesis] GO:0005092[GDP-dissociation inhibitor activity] GO:0005178[integrin binding] GO:0005515[protein binding] GO:0005634[nucleus] GO:0005654[nucleoplasm] GO:0005737[cytoplasm] GO:0005829[cytosol] GO:0005856[cytoskeleton] GO:0005886[plasma membrane] GO:0006469[negative regulation of protein kinase activity] GO:0006933[negative regulation of cell adhesion involved in substrate-bound cell migration] GO:0007155[cell adhesion] GO:0007160[cell-matrix adhesion] GO:0007219[Notch signaling pathway] GO:0007229[integrin-mediated signaling pathway] GO:0008284[positive regulation of cell population proliferation] GO:0008285[negative regulation of cell population proliferation] GO:0010595[positive regulation of endothelial cell migration] GO:0010764[negative regulation of fibroblast migration] GO:0016020[membrane] GO:0016477[cell migration] GO:0016604[nuclear body] GO:0030027[lamellipodium] GO:0030154[cell differentiation] GO:0031214[biomineral tissue development] GO:0032091[negative regulation of protein binding] GO:0032148[activation of protein kinase B activity] GO:0033622[integrin activation] GO:0033628[regulation of cell adhesion mediated by integrin] GO:0034451[centriolar satellite] GO:0035148[tube formation] GO:0035556[intracellular signal transduction] GO:0035924[cellular response to vascular endothelial growth factor stimulus] GO:0042995[cell projection] GO:0043087[regulation of GTPase activity] GO:0043113[receptor clustering] GO:0044344[cellular response to fibroblast growth factor stimulus] GO:0045747[positive regulation of Notch signaling pathway] GO:0045944[positive regulation of transcription by RNA polymerase II] GO:0048471[perinuclear region of cytoplasm] GO:0051451[myoblast migration] GO:0051496[positive regulation of stress fiber assembly] GO:0051781[positive regulation of cell division] GO:0051895[negative regulation of focal adhesion assembly] GO:0051897[positive regulation of protein kinase B signaling] GO:0070373[negative regulation of ERK1 and ERK2 cascade] GO:0071944[cell periphery] GO:0072659[protein localization to plasma membrane] GO:0090051[negative regulation of cell migration involved in sprouting angiogenesis] GO:0090314[positive regulation of protein targeting to membrane] GO:0090315[negative regulation of protein targeting to membrane] GO:0097746[blood vessel diameter maintenance] GO:1900025[negative regulation of substrate adhesion-dependent cell spreading] GO:2001044[regulation of integrin-mediated signaling pathway]