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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HS1BP3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
58.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
50.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
50.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
49.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
46.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
43.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
42.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
39.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
37.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
34.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
31.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
30.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
30.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
30.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
29.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
27.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
27.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
26.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
25.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
25.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
25.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
24.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
24.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
23.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
22.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
22.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
21.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
20.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
19.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
19.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
18.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
18.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
18.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
17.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
17.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
16.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
16.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
16.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
15.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
14.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
14.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
14.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
13.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
12.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
12.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
12.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
11.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
11.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
11.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
11.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
11.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
10.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
10.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
10.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
9.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
9.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
8.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HS1BP3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
117.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
114.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
102.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
98.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
88.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
87.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
86.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
85.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
85.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
85.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
83.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
82.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
82.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
80.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
79.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
78.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
77.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
77.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
77.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
75.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
75.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
73.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
73.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
71.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
71.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
71.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
71.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
69.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
68.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
68.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
67.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
67.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
67.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
66.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
66.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
66.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
66.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
65.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
65.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
65.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
65.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
64.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
64.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
64.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
64.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
64.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
63.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
63.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
63.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
63.4
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
63.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
63.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
62.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
62.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
61.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
61.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
61.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
61.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
60.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
60.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
60.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
60.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
59.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
59.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
59.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
59.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
58.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
58.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
58.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
58.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
58.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
58.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
58.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
58.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
58.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
57.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
57.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
57.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
57.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
56.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
56.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
56.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
55.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
55.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
55.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
55.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
55.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
54.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
54.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
54.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
54.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
54.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
54.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
53.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
53.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
53.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
53.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
53.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
53.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
53.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
53.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
53.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
53.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
53.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
52.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
52.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
52.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
52.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
52.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
52.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
52.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
51.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
51.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
51.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
51.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
50.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
50.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
50.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
50.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
50.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
50.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
50.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
50.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
50.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
50.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
50.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
50.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
50.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
50.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
50.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
50.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
50.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
49.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
49.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
49.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
49.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
49.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
49.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
49.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
49.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
48.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
48.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
48.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
48.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
48.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
48.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
48.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
48.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
48.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
48.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
48.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
48.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
48.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
47.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
47.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
47.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
47.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
47.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
46.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
46.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
46.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
46.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
46.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
46.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
46.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
46.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
46.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
46.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
46.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
46.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
45.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
45.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
45.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
45.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
45.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
45.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
45.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
45.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
45.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
45.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
44.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
44.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
44.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
44.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
44.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
44.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
44.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
44.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
43.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
43.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
43.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
43.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
43.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
43.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
43.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
43.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
43.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
43.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
43.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
43.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
42.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
42.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
42.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
42.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
42.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
42.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
42.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
42.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
42.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
42.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
42.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
42.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
42.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
42.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
42.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
42.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
42.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
41.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
41.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
41.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
41.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
41.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
41.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
41.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
41.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
41.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
41.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
41.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
41.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
41.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
41.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
40.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
40.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
40.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
40.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
40.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
40.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
40.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
40.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
40.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
39.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
39.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
39.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
39.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
39.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
39.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
39.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
39.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
39.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
39.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
39.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
39.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
39.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
39.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
39.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
39.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
39.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
38.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
38.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
38.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
38.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
38.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
38.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
38.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
38.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
38.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
38.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
38.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
38.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
38.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
38.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
38.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
38.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
38.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
37.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
37.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
37.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
37.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
37.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
37.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
37.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
37.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
36.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
36.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
36.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
36.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
36.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
36.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
36.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
36.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
36.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
36.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
36.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
36.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
35.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
35.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
35.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
35.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
35.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
35.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
35.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
35.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
35.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
35.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
35.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
35.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
34.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
34.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
34.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
34.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
34.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
34.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
34.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
34.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
34.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
34.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
34.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
34.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
34.0
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
33.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
33.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
33.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
33.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
33.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
33.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
33.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
33.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
32.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
32.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
32.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
32.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
32.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
32.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
32.6
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
32.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
32.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
32.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
32.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
32.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
32.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
32.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
31.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
31.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
31.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
31.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
31.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
31.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
31.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
31.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
31.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
31.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
31.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
30.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
30.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
30.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
30.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
30.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
29.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
29.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
29.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
29.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
29.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
29.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
29.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
29.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
29.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
29.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
28.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
28.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
28.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
28.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
28.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
28.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
28.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
28.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
28.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
28.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
28.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
28.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
28.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
28.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
28.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
27.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
27.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
27.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
27.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
27.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
27.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
27.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
27.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
27.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
27.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
27.3
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
26.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
26.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
26.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
26.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
26.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
26.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
26.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
26.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
26.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
26.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
26.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
26.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
26.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
26.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
26.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
26.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
25.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
25.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
25.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
25.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
25.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
25.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
25.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
25.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
25.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
25.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
24.8
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
24.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
24.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
24.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
24.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
24.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
24.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
24.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
24.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
23.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
23.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
23.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
23.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
23.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
23.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
23.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
22.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
22.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
22.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
22.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
22.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
22.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
22.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
21.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
21.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
21.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
21.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
21.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
21.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
21.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
21.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
21.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
21.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
21.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
21.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
20.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
20.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
20.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
20.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
20.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
20.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
20.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
19.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
19.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
19.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
19.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
19.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
19.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
18.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
18.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
18.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
18.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
18.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
18.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
17.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
17.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
17.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
17.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
17.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
17.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
17.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
17.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
17.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
16.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
16.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
16.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
16.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
15.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
15.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
14.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
14.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
14.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
14.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
14.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
13.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
13.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
13.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
13.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
12.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
11.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
11.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
11.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
8.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
7.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
6.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HS1BP3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
42.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
78.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
76.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
69.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
68.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
68.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
68.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
67.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
67.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
63.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
63.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
62.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
62.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
62.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
61.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
60.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
60.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
59.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
58.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
57.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
57.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
56.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
55.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
55.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
55.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
55.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
54.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
54.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
53.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
53.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
52.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
51.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
51.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
50.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
50.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
50.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
49.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
49.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
49.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
46.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
45.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
44.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
44.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
44.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
44.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
43.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
43.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
43.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
42.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
42.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
42.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
41.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
41.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
40.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
40.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
39.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
39.3
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
38.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
37.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
37.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
36.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
36.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
35.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
35.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
35.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
34.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
34.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
33.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
32.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
32.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
31.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
31.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
30.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
30.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
29.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
28.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
28.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
28.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
27.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
27.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
25.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
25.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
25.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
24.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
24.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
24.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
24.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
23.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
21.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
20.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
19.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
18.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
18.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
17.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
16.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
15.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
14.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
14.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HS1BP3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
123.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
118.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
116.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
107.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
94.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
87.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
86.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
86.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
85.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
85.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
82.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
81.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
81.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
81.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
80.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
79.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
78.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
76.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
75.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
75.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
75.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
73.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
73.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
72.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
72.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
70.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
70.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
70.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
69.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
69.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
69.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
68.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
67.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
67.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
67.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
66.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
66.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
65.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
64.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
64.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
64.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
63.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
63.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
62.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
62.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
61.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
60.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
60.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
59.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
59.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
59.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
59.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
59.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
58.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
58.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
58.7
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
58.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
58.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
58.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
57.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
57.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
57.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
57.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
57.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
56.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
56.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
56.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
55.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
54.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
54.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
53.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
52.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
52.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
52.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
52.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
52.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
52.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
51.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
51.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
51.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
51.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
51.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
51.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
50.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
49.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
49.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
49.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
48.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
48.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
48.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
48.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
48.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
48.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
48.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
47.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
47.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
46.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
46.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
46.1
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
45.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
45.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
45.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
45.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
45.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
44.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
44.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
44.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
44.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
44.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
44.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
43.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
43.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
43.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
43.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
43.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
43.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
42.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
42.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
42.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
42.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
42.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
42.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
42.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
41.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
41.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
41.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
41.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
41.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
41.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
41.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
40.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
40.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
40.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
40.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
40.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
40.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
40.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
40.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
39.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
39.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
39.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
39.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
39.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
39.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
39.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
39.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
39.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
39.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
38.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
38.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
38.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
38.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
38.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
38.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
38.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
37.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
37.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
37.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
36.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
36.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
36.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
36.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
36.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
35.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
35.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
35.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
35.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
35.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
35.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
35.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
35.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
35.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
35.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
34.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
34.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
34.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
34.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
34.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
33.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
33.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
33.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
33.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
33.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
33.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
33.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
33.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
33.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
33.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
33.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
33.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
33.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
33.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
32.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
32.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
32.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
32.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
32.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
32.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
32.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
32.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
32.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
32.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
31.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
31.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
31.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
31.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
31.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
30.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
30.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
30.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
30.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
30.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
30.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
30.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
30.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
30.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
30.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
29.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
29.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
29.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
29.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
29.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
29.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
29.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
28.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
28.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
27.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
27.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
27.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
26.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
26.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
26.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
26.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
26.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
26.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
26.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
26.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
25.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
25.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
25.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
25.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
25.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
25.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
25.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
25.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
24.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
24.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
24.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
24.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
24.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
24.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
24.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
24.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
24.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
23.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
23.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
23.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
23.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
22.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
22.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
21.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
21.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
21.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
21.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
20.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
20.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
20.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
19.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
18.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
17.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
17.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
16.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
15.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
13.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
7.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012900004
Tumor
1.1
CPT0078830003
Tumor
0.8
CPT0089460004
Tumor
0.7
CPT0077110003
Tumor
0.7
CPT0009060003
Tumor
0.7
CPT0001500009
Tumor
0.7
CPT0006440003
Tumor
0.6
CPT0071150004
Tumor
0.6
CPT0065810003
Tumor
0.5
CPT0006630003
Tumor
0.5
CPT0007320003
Tumor
0.5
CPT0079480003
Tumor
0.4
CPT0086950003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0002270011
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0078800003
Tumor
0.2
CPT0063320003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0023710001
Normal
0.2
CPT0001220008
Tumor
0.2
CPT0092800003
Normal
0.2
CPT0014160003
Tumor
0.2
CPT0025060001
Normal
0.2
CPT0076350001
Normal
0.2
CPT0001540009
Tumor
0.2
CPT0014450004
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0088900003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0092310003
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0079410003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0078930003
Tumor
0.1
CPT0089480003
Normal
0.1
CPT0006950001
Normal
0.1
CPT0081880003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0010170001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0079430001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0086970003
Normal
0.1
CPT0063640001
Normal
0.1
CPT0066470004
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0023350003
Tumor
0.1
CPT0001190001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0024680001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0007470001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0086890003
Normal
0.0
CPT0077140001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0088550004
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0088970003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0011240003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0001180009
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0081620001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0086360003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0065430003
Tumor
-0.1
CPT0079000001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0015730003
Tumor
-0.1
CPT0023360001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0012550003
Tumor
-0.1
CPT0001260009
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0088690003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0088570001
Normal
-0.2
CPT0001340003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0088640003
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0079230003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0092730003
Tumor
-0.2
CPT0063330001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0079180003
Tumor
-0.2
CPT0084590001
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0088760003
Tumor
-0.3
CPT0001550001
Normal
-0.3
CPT0079380003
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0012640003
Normal
-0.3
CPT0092190003
Normal
-0.3
CPT0076330003
Tumor
-0.3
CPT0078660003
Tumor
-0.4
CPT0077320001
Normal
-0.4
CPT0078990003
Tumor
-0.4
CPT0086820003
Tumor
-0.4
CPT0086030003
Tumor
-0.4
CPT0079300001
Normal
-0.4
CPT0017850003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0063630003
Tumor
-0.5
CPT0079510001
Normal
-0.5
CPT0012280003
Tumor
-0.5
CPT0012180003
Tumor
-0.6
CPT0011410003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
