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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB3GAP2 is not prognostic in Colon Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.8
Number of samples
254
Samples
Sample
Description
TPM
TCGA-A6-2674-01A
0 years, male, white, stage:Stage IV, alive, 1331 days
30.0
TCGA-A6-6780-01A
0 years, male, white, stage:Stage IIA, alive, 612 days
26.1
TCGA-A6-5656-01A
0 years, male, white, stage:Stage I, alive, 1001 days
22.8
TCGA-NH-A6GA-01A
0 years, male, black or african american, stage:Stage IIIC, dead, 302 days
19.0
TCGA-A6-3810-01A
0 years, male, white, stage:Stage IIA, alive, 1111 days
18.9
TCGA-A6-6781-01A
0 years, male, white, stage:Stage IIIC, alive, 598 days
18.1
TCGA-A6-6652-01A
0 years, male, black or african american, stage:Stage IVA, alive, 751 days
15.1
TCGA-G4-6303-01A
0 years, female, white, stage:Stage IV, dead, 2003 days
13.6
TCGA-CM-6163-01A
0 years, male, white, stage:Stage I, alive, 427 days
13.2
TCGA-A6-3809-01A
0 years, female, white, stage:Stage IIB, alive, 996 days
12.9
TCGA-G4-6297-01A
0 years, female, white, stage:Stage IV, alive, 2506 days
12.8
TCGA-A6-6649-01A
0 years, male, white, stage:Stage IIIB, alive, 735 days
12.6
TCGA-WS-AB45-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2130 days
11.8
TCGA-DM-A28C-01A
0 years, male, white, stage:Stage IIA, dead, 2475 days
11.8
TCGA-CM-6172-01A
0 years, female, white, stage:Stage IIIB, alive, 335 days
11.7
TCGA-G4-6311-01A
0 years, male, white, stage:Stage III, alive, 1199 days
11.7
TCGA-D5-6922-01A
0 years, male, white, stage:Stage IIIA, alive, 308 days
10.9
TCGA-A6-6648-01A
0 years, male, white, stage:Stage IVA, alive, 766 days
10.8
TCGA-A6-6654-01A
0 years, female, white, stage:Stage IIIB, alive, 726 days
10.6
TCGA-AZ-6606-01A
0 years, male, white, stage:Stage IV, dead, 357 days
10.5
TCGA-AA-3675-01A
0 years, male, stage:Stage II, alive, 1431 days
10.5
TCGA-CM-6167-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 456 days
10.4
TCGA-D5-6923-01A
0 years, male, white, stage:Stage I, alive, 378 days
10.4
TCGA-AY-A69D-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
10.4
TCGA-CM-5348-01A
0 years, male, white, stage:Stage IIIB, alive, 699 days
10.4
TCGA-CA-6716-01A
0 years, male, asian, stage:Stage IIA, alive, 371 days
10.2
TCGA-D5-6535-01A
0 years, female, white, stage:Stage IIIB, alive, 460 days
9.9
TCGA-AA-3713-01A
0 years, male, stage:Stage IV, alive, 579 days
9.9
TCGA-D5-6536-01A
0 years, male, white, stage:Stage IIA, alive, 543 days
9.9
TCGA-CM-6161-01A
0 years, female, white, stage:Stage I, alive, 457 days
9.7
TCGA-D5-6924-01A
0 years, male, white, stage:Stage IIA, alive, 435 days
9.5
TCGA-D5-6533-01A
0 years, female, white, stage:'--, alive, 775 days
9.5
TCGA-CM-6162-01A
0 years, female, white, stage:Stage IIIB, alive, 365 days
9.3
TCGA-CA-6715-01A
0 years, male, asian, stage:Stage IIIB, alive, 383 days
9.1
TCGA-5M-AATE-01A
0 years, male, black or african american, stage:Stage IIA, alive, 1200 days
9.1
TCGA-F4-6459-01A
0 years, female, white, stage:Stage IIIB, dead, 262 days
9.0
TCGA-SS-A7HO-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1829 days
9.0
TCGA-D5-5539-01A
0 years, male, white, stage:Stage IIIA, alive, 596 days
8.9
TCGA-D5-5538-01A
0 years, female, white, stage:Stage IIIB, dead, 1661 days
8.9
TCGA-CK-5912-01A
0 years, male, white, stage:Stage I, dead, 1493 days
8.7
TCGA-CM-5861-01A
0 years, female, white, stage:Stage IIA, alive, 457 days
8.7
TCGA-CM-6165-01A
0 years, male, white, stage:Stage IIA, alive, 488 days
8.6
TCGA-A6-6140-01A
0 years, male, white, stage:Stage IIA, alive, 734 days
8.6
TCGA-AZ-4323-01A
0 years, male, white, stage:Stage IV, dead, 43 days
8.5
TCGA-D5-6539-01A
0 years, female, white, stage:'--, alive, 380 days
8.5
TCGA-AZ-6600-01A
0 years, male, black or african american, stage:Stage IV, dead, 368 days
8.5
TCGA-A6-5662-01A
0 years, male, white, stage:Stage IVA, alive, 718 days
8.5
TCGA-DM-A28F-01A
0 years, male, white, stage:Stage IIIB, dead, 1094 days
8.4
TCGA-D5-6532-01A
0 years, male, white, stage:Stage IIA, alive, 555 days
8.4
TCGA-CA-6718-01A
0 years, male, asian, stage:Stage IIA, dead, 306 days
8.4
TCGA-AM-5820-01A
0 years, female, white, stage:Stage IVA, alive, 14 days
8.4
TCGA-A6-5661-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1020 days
8.3
TCGA-A6-A567-01A
0 years, male, black or african american, stage:Stage IV, dead, 1881 days
8.2
TCGA-D5-7000-01A
0 years, female, white, stage:Stage I, alive, 312 days
8.2
TCGA-G4-6299-01A
0 years, male, white, stage:Stage IIIC, alive, 2268 days
8.1
TCGA-F4-6855-01A
0 years, female, white, stage:Stage IIA, alive, 1442 days
8.1
TCGA-CM-5349-01A
0 years, female, white, stage:Stage IIA, alive, 915 days
8.1
TCGA-CM-6168-01A
0 years, female, black or african american, stage:Stage IIA, alive, 395 days
8.1
TCGA-D5-6538-01A
0 years, female, white, stage:Stage IIIB, alive, 521 days
8.1
TCGA-NH-A8F7-01A
0 years, female, black or african american, stage:Stage IIA, alive, 543 days
8.1
TCGA-CM-6680-01A
0 years, female, white, stage:Stage IIIB, alive, 366 days
8.1
TCGA-DM-A1DB-01A
0 years, male, white, stage:Stage IIA, dead, 1348 days
8.0
TCGA-QG-A5Z2-01A
0 years, male, black or african american, stage:Stage I, alive, 952 days
7.9
TCGA-CA-5797-01A
0 years, male, asian, stage:Stage IIA, alive, 383 days
7.9
TCGA-D5-6898-01A
0 years, female, white, stage:Stage I, alive, 229 days
7.8
TCGA-A6-6137-01A
0 years, male, white, stage:Stage IIIB, alive, 824 days
7.8
TCGA-A6-5667-01A
0 years, female, white, stage:Stage IIIB, alive, 887 days
7.8
TCGA-A6-A56B-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 1711 days
7.8
TCGA-DM-A28A-01A
0 years, male, white, stage:Stage IIIC, dead, 805 days
7.8
TCGA-F4-6461-01A
0 years, female, white, stage:Stage IIIC, dead, 338 days
7.7
TCGA-DM-A0X9-01A
0 years, female, white, stage:Stage IIA, alive, 3641 days
7.7
TCGA-CM-6675-01A
0 years, male, black or african american, stage:Stage IVB, alive, 397 days
7.7
TCGA-F4-6463-01A
0 years, male, white, stage:Stage IIA, alive, 1087 days
7.6
TCGA-CA-5255-01A
0 years, male, asian, stage:Stage IIA, alive, 376 days
7.5
TCGA-CK-4952-01A
0 years, female, white, stage:Stage IIIC, alive, 475 days
7.5
TCGA-CM-5864-01A
0 years, male, white, stage:Stage I, alive, 457 days
7.4
TCGA-QG-A5YV-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1301 days
7.4
TCGA-CM-6169-01A
0 years, male, black or african american, stage:Stage IIA, alive, 396 days
7.4
TCGA-F4-6569-01A
0 years, male, white, stage:Stage I, alive, 1087 days
7.4
TCGA-A6-6138-01A
0 years, male, white, stage:Stage I, alive, 685 days
7.4
TCGA-D5-6931-01A
0 years, male, white, stage:Stage IIIC, alive, 365 days
7.3
TCGA-CK-5914-01A
0 years, male, white, stage:Stage IIIB, alive, 669 days
7.3
TCGA-QG-A5Z1-01A
0 years, male, black or african american, stage:Stage IIIB, dead, 256 days
7.3
TCGA-F4-6856-01A
0 years, male, white, stage:Stage I, alive, 1074 days
7.2
TCGA-CM-6170-01A
0 years, female, white, stage:Stage I, alive, 457 days
7.2
TCGA-AA-3660-01A
0 years, female, stage:Stage II, alive, 2375 days
7.2
TCGA-DM-A1D6-01A
0 years, male, white, stage:Stage IIA, dead, 570 days
7.2
TCGA-F4-6703-01A
0 years, male, white, stage:Stage IIA, alive, 1456 days
7.1
TCGA-CA-6719-01A
0 years, male, asian, stage:Stage IIA, alive, 435 days
7.1
TCGA-DM-A28H-01A
0 years, male, white, stage:Stage IIIC, alive, 3561 days
7.1
TCGA-A6-5657-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 962 days
7.0
TCGA-G4-6627-01A
0 years, male, white, stage:Stage IIA, alive, 2175 days
7.0
TCGA-CM-5860-01A
0 years, male, white, stage:Stage IIA, alive, 974 days
7.0
TCGA-AZ-6607-01A
0 years, male, white, stage:Stage IV, dead, 97 days
6.9
TCGA-A6-4105-01A
0 years, male, white, stage:Stage IIA, dead, 442 days
6.9
TCGA-CA-6717-01A
0 years, male, asian, stage:Stage IIA, alive, 388 days
6.9
TCGA-AD-6965-01A
0 years, male, white, stage:Stage IIIC, alive, 805 days
6.9
TCGA-3L-AA1B-01A
0 years, female, black or african american, stage:Stage I, alive, 475 days
6.8
TCGA-DM-A28E-01A
0 years, female, white, stage:Stage IIA, alive, 3648 days
6.8
TCGA-G4-6310-01A
0 years, male, white, stage:Stage IIIB, alive, 1935 days
6.8
TCGA-D5-6534-01A
0 years, female, white, stage:Stage IIA, alive, 1316 days
6.8
TCGA-D5-6920-01A
0 years, female, white, stage:Stage IIA, alive, 377 days
6.8
TCGA-AA-3662-01A
0 years, female, stage:Stage IV, alive, 184 days
6.8
TCGA-DM-A1D4-01A
0 years, male, white, stage:Stage IIA, dead, 2821 days
6.7
TCGA-F4-6807-01A
0 years, female, white, stage:Stage IIIC, alive, 1309 days
6.7
TCGA-AY-6197-01A
0 years, male, white, stage:Stage IIA, alive, 652 days
6.7
TCGA-F4-6805-01A
0 years, female, white, stage:Stage IIA, alive, 1047 days
6.7
TCGA-AA-3489-01A
0 years, male, stage:Stage II, dead, 214 days
6.7
TCGA-D5-5537-01A
0 years, male, white, stage:'--, dead, 1381 days
6.7
TCGA-AD-6901-01A
0 years, male, white, stage:'--, dead, 682 days
6.6
TCGA-A6-2675-01A
0 years, male, white, stage:Stage IIA, alive, 1321 days
6.6
TCGA-F4-6460-01A
0 years, female, white, stage:Stage IIIB, dead, 972 days
6.6
TCGA-AU-3779-01A
0 years, female, white, stage:Stage IIA, alive, 441 days
6.6
TCGA-CM-5862-01A
0 years, male, white, stage:Stage IVA, dead, 153 days
6.6
TCGA-D5-6926-01A
0 years, male, white, stage:Stage IIIB, alive, 275 days
6.6
TCGA-AD-6899-01A
0 years, male, white, stage:Stage IIIC, dead, 176 days
6.6
TCGA-A6-5660-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 888 days
6.6
TCGA-CM-5863-01A
0 years, female, white, stage:Stage IIIB, alive, 457 days
6.6
TCGA-F4-6854-01A
0 years, female, white, stage:Stage IIA, alive, 16 days
6.5
TCGA-G4-6293-01A
0 years, female, white, stage:Stage III, alive, 4051 days
6.5
TCGA-A6-6651-01A
0 years, female, white, stage:Stage IIIB, alive, 662 days
6.5
TCGA-AZ-6603-01A
0 years, female, white, stage:'--, dead, 899 days
6.4
TCGA-A6-6650-01A
0 years, female, black or african american, stage:Stage IIA, alive, 627 days
6.4
TCGA-QG-A5YX-01A
0 years, female, black or african american, stage:Stage IIA, alive, 1003 days
6.4
TCGA-AA-3697-01A
0 years, male, stage:Stage II, alive, 2587 days
6.4
TCGA-G4-6314-01A
0 years, female, white, stage:Stage IV, alive, 1093 days
6.3
TCGA-AA-3655-01A
0 years, male, stage:Stage II, alive, 1856 days
6.3
TCGA-G4-6295-01A
0 years, female, white, stage:Stage II, alive, 254 days
6.3
TCGA-G4-6315-01A
0 years, male, white, stage:Stage IV, alive, 1883 days
6.3
TCGA-AA-3511-01A
0 years, male, stage:Stage II, alive, 212 days
6.3
TCGA-AY-6386-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 542 days
6.3
TCGA-G4-6294-01A
0 years, male, white, stage:Stage IV, dead, 858 days
6.2
TCGA-AU-6004-01A
0 years, female, white, stage:Stage I, alive, 824 days
6.2
TCGA-D5-6529-01A
0 years, male, white, stage:Stage IIA, alive, 614 days
6.2
TCGA-AA-A02K-01A
0 years, male, stage:Stage IV, dead, 426 days
6.2
TCGA-A6-A565-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 494 days
6.1
TCGA-AD-6548-01A
0 years, female, white, stage:Stage I, alive, 650 days
6.1
TCGA-D5-6927-01A
0 years, male, white, stage:Stage IIA, alive, 287 days
6.1
TCGA-CK-6747-01A
0 years, female, white, stage:Stage IIA, alive, 820 days
6.1
TCGA-A6-A566-01A
0 years, female, black or african american, stage:Stage IIIB, dead, 758 days
6.1
TCGA-AA-3496-01A
0 years, female, stage:Stage II, alive, 31 days
6.1
TCGA-A6-5659-01A
0 years, male, white, stage:Stage I, alive, 926 days
6.1
TCGA-QL-A97D-01A
0 years, female, black or african american, stage:Stage I, alive, 666 days
6.1
TCGA-NH-A6GB-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 476 days
6.0
TCGA-CM-6164-01A
0 years, female, white, stage:Stage IIA, alive, 883 days
6.0
TCGA-A6-5666-01A
0 years, male, white, stage:Stage IIC, alive, 995 days
6.0
TCGA-CA-5254-01A
0 years, female, asian, stage:Stage IIA, alive, 386 days
6.0
TCGA-F4-6570-01A
0 years, female, white, stage:Stage IIA, dead, 188 days
6.0
TCGA-AY-A54L-01A
0 years, female, black or african american, stage:Stage I, alive, 525 days
5.9
TCGA-AY-A8YK-01A
0 years, male, black or african american, stage:Stage IVA, alive, 573 days
5.9
TCGA-F4-6806-01A
0 years, female, white, stage:Stage I, alive, 1260 days
5.9
TCGA-NH-A8F8-01A
0 years, male, black or african american, stage:Stage IV, dead, 511 days
5.9
TCGA-AA-A02Y-01A
0 years, male, stage:Stage I, alive, 1216 days
5.8
TCGA-4T-AA8H-01A
0 years, female, black or african american, stage:Stage IIA, alive, 385 days
5.8
TCGA-A6-5664-01A
0 years, male, black or african american, stage:Stage IIIC, alive, 672 days
5.8
TCGA-D5-6928-01A
0 years, male, white, stage:Stage IIA, alive, 354 days
5.8
TCGA-DM-A28K-01A
0 years, male, white, stage:Stage IIA, alive, 2988 days
5.7
TCGA-DM-A288-01A
0 years, male, white, stage:Stage IIIC, dead, 427 days
5.7
TCGA-CK-6748-01A
0 years, female, white, stage:Stage IV, alive, 61 days
5.6
TCGA-AY-6196-01A
0 years, male, white, stage:Stage IIIC, alive, 6 days
5.6
TCGA-G4-6625-01A
0 years, female, white, stage:Stage IIA, alive, 2792 days
5.6
TCGA-CM-6171-01A
0 years, female, white, stage:Stage I, alive, 427 days
5.6
TCGA-CM-6677-01A
0 years, female, white, stage:Stage IIA, alive, 337 days
5.6
TCGA-AA-3526-01A
0 years, male, stage:Stage I, alive, 580 days
5.5
TCGA-AD-A5EK-01A
0 years, male, black or african american, stage:Stage I, alive, 500 days
5.5
TCGA-A6-6653-01A
0 years, male, white, stage:Stage I, alive, 742 days
5.5
TCGA-G4-6323-01A
0 years, male, black or african american, stage:Stage IA, alive, 419 days
5.5
TCGA-NH-A50T-01A
0 years, female, black or african american, stage:Stage IIA, alive, 553 days
5.5
TCGA-CM-6679-01A
0 years, male, white, stage:Stage IIA, alive, 306 days
5.5
TCGA-AZ-5407-01A
0 years, female, white, stage:Stage I, alive, 2683 days
5.5
TCGA-AY-A71X-01A
0 years, female, black or african american, stage:Stage I, alive, 588 days
5.5
TCGA-AZ-5403-01A
0 years, male, white, stage:Stage II, dead, 1910 days
5.4
TCGA-AD-6963-01A
0 years, male, white, stage:'--, alive, 834 days
5.3
TCGA-D5-6537-01A
0 years, male, white, stage:Stage IIIB, dead, 146 days
5.3
TCGA-CM-4751-01A
0 years, male, white, stage:Stage IIIB, alive, 822 days
5.3
TCGA-AZ-6599-01A
0 years, male, white, stage:Stage I, dead, 206 days
5.3
TCGA-DM-A0XF-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
5.2
TCGA-AD-6888-01A
0 years, male, white, stage:Stage IIIB, dead, 472 days
5.2
TCGA-AM-5821-01A
0 years, female, white, stage:Stage IIA, alive, 28 days
5.2
TCGA-A6-6142-01A
0 years, female, white, stage:Stage IVA, alive, 763 days
5.2
TCGA-CM-6166-01A
0 years, female, white, stage:Stage I, alive, 669 days
5.2
TCGA-5M-AAT6-01A
0 years, female, black or african american, stage:Stage IV, dead, 290 days
5.1
TCGA-G4-6309-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2600 days
5.1
TCGA-DM-A1D0-01A
0 years, female, white, stage:Stage IIA, alive, 3974 days
5.1
TCGA-CM-5868-01A
0 years, female, white, stage:Stage IVA, alive, 518 days
5.1
TCGA-D5-6531-01A
0 years, male, white, stage:Stage IIA, alive, 540 days
5.1
TCGA-F4-6808-01A
0 years, female, white, stage:Stage I, alive, 1024 days
5.0
TCGA-RU-A8FL-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 1177 days
5.0
TCGA-DM-A1DA-01A
0 years, female, white, stage:Stage IIIC, dead, 228 days
5.0
TCGA-A6-6141-01A
0 years, male, black or african american, stage:Stage IIA, alive, 255 days
5.0
TCGA-G4-6306-01A
0 years, male, white, stage:'--, alive, 1359 days
5.0
TCGA-CK-5913-01A
0 years, female, white, stage:Stage IIA, alive, 1561 days
5.0
TCGA-AZ-6605-01A
0 years, male, white, stage:Stage IIIB, dead, 159 days
5.0
TCGA-G4-6321-01A
0 years, female, white, stage:Stage III, alive, 672 days
5.0
TCGA-G4-6626-01A
0 years, male, white, stage:Stage IIA, dead, 1 days
4.9
TCGA-A6-A5ZU-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 293 days
4.9
TCGA-D5-6540-01A
0 years, male, white, stage:Stage I, alive, 491 days
4.9
TCGA-CM-6676-01A
0 years, male, white, stage:Stage I, alive, 337 days
4.9
TCGA-CM-6678-01A
0 years, female, white, stage:Stage IVA, alive, 335 days
4.9
TCGA-NH-A50V-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 588 days
4.8
TCGA-D5-6541-01A
0 years, male, white, stage:Stage IIA, alive, 474 days
4.8
TCGA-DM-A285-01A
0 years, female, white, stage:Stage IV, dead, 179 days
4.8
TCGA-DM-A1D8-01A
0 years, female, white, stage:'--, dead, 383 days
4.8
TCGA-DM-A1D9-01A
0 years, female, white, stage:Stage IIA, alive, 4270 days
4.7
TCGA-DM-A28M-01A
0 years, male, white, stage:Stage IIA, alive, 2895 days
4.7
TCGA-CK-6751-01A
0 years, female, white, stage:Stage I, alive, 518 days
4.6
TCGA-CK-5916-01A
0 years, female, white, stage:Stage I, dead, 643 days
4.6
TCGA-DM-A28G-01A
0 years, male, white, stage:Stage IIA, dead, 1849 days
4.5
TCGA-A6-6782-01A
0 years, male, white, stage:Stage IIB, alive, 617 days
4.4
TCGA-AD-6895-01A
0 years, male, white, stage:Stage IIIB, alive, 763 days
4.4
TCGA-G4-6588-01A
0 years, female, white, stage:Stage IIA, alive, 796 days
4.4
TCGA-F4-6704-01A
0 years, male, american indian or alaska native, stage:Stage IIIC, alive, 47 days
4.4
TCGA-5M-AAT4-01A
0 years, male, black or african american, stage:Stage IV, dead, 49 days
4.3
TCGA-CM-5344-01A
0 years, female, white, stage:Stage IIIB, alive, 670 days
4.3
TCGA-NH-A50U-01A
0 years, male, black or african american, stage:Stage IVA, dead, 334 days
4.3
TCGA-CK-4950-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 2599 days
4.3
TCGA-4N-A93T-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 146 days
4.3
TCGA-NH-A6GC-01A
0 years, female, black or african american, stage:Stage IVB, alive, 389 days
4.3
TCGA-F4-6809-01A
0 years, female, white, stage:Stage IVA, dead, 403 days
4.2
TCGA-D5-6932-01A
0 years, male, white, stage:Stage IIA, alive, 346 days
4.2
TCGA-QG-A5YW-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 896 days
4.2
TCGA-G4-6317-01A
0 years, female, white, stage:Stage IIIC, alive, 1095 days
4.2
TCGA-AY-5543-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1004 days
4.2
TCGA-D5-6930-01A
0 years, male, white, stage:Stage IIA, alive, 406 days
4.1
TCGA-G4-6320-01A
0 years, male, white, stage:Stage III, alive, 804 days
4.1
TCGA-DM-A282-01A
0 years, female, white, stage:Stage IIA, alive, 4233 days
4.1
TCGA-AA-3685-01A
0 years, male, stage:Stage II, alive, 1127 days
4.0
TCGA-DM-A280-01A
0 years, female, white, stage:Stage IIA, dead, 236 days
3.9
TCGA-DM-A1HA-01A
0 years, male, white, stage:Stage IIIC, alive, 2600 days
3.9
TCGA-D5-6929-01A
0 years, female, white, stage:Stage IV, alive, 408 days
3.9
TCGA-T9-A92H-01A
0 years, male, black or african american, stage:Stage IIA, alive, 362 days
3.9
TCGA-G4-6322-01A
0 years, male, white, stage:Stage IIIB, alive, 792 days
3.9
TCGA-AD-5900-01A
0 years, male, white, stage:Stage I, alive, 370 days
3.9
TCGA-AZ-6608-01A
0 years, female, white, stage:Stage IIIA, dead, 59 days
3.8
TCGA-CM-4744-01A
0 years, male, white, stage:Stage I, alive, 609 days
3.7
TCGA-DM-A1D7-01A
0 years, male, white, stage:Stage IIA, dead, 405 days
3.6
TCGA-CM-6674-01A
0 years, male, white, stage:Stage IIA, alive, 394 days
3.6
TCGA-DM-A1HB-01A
0 years, male, white, stage:Stage IIIB, alive, 4126 days
3.6
TCGA-AZ-6601-01A
0 years, male, white, stage:Stage II, dead, 3042 days
3.6
TCGA-A6-2686-01A
0 years, female, white, stage:Stage IIA, dead, 1126 days
3.4
TCGA-D5-6530-01A
0 years, male, white, stage:Stage I, alive, 621 days
3.4
TCGA-A6-5665-01A
0 years, female, white, stage:Stage IIA, alive, 671 days
3.3
TCGA-DM-A0XD-01A
0 years, male, white, stage:Stage IIA, dead, 743 days
3.3
TCGA-G4-6304-01A
0 years, female, white, stage:Stage IIB, alive, 1631 days
3.2
TCGA-AD-6889-01A
0 years, male, asian, stage:Stage IIA, dead, 2532 days
3.2
TCGA-AD-6964-01A
0 years, male, white, stage:'--, dead, 331 days
3.1
TCGA-AZ-6598-01A
0 years, female, white, stage:Stage II, dead, 1503 days
3.1
TCGA-AA-3663-01A
0 years, male, stage:Stage II, alive, 212 days
3.0
TCGA-AZ-4616-01A
0 years, female, white, stage:Stage IV, dead, 156 days
2.8
TCGA-G4-6307-01A
0 years, female, white, stage:Stage IIIB, alive, 1674 days
2.8
TCGA-AD-6890-01A
0 years, male, white, stage:'--, alive, 746 days
2.8
TCGA-G4-6586-01A
0 years, female, white, stage:Stage IIA, alive, 1089 days
2.5
TCGA-CM-4743-01A
0 years, male, white, stage:Stage IIA, alive, 701 days
2.2
TCGA-G4-6628-01A
0 years, male, white, stage:Stage I, alive, 2424 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB3GAP2 is not prognostic in Colon Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.3
Number of samples
486
Samples
Sample
Description
TPM
U0273
0 years, male, NA, stage:T2N1M0, alive, 2641 days
84.1
U0248
0 years, male, NA, stage:T3N0M0, alive, 1870 days
53.6
U0408
0 years, female, NA, stage:T4N0M0, dead, 2100 days
47.9
U0320
0 years, female, NA, stage:T4N2M1, alive, 188 days
41.4
U0440
0 years, female, NA, stage:T4N0M0, dead, 2743 days
41.4
U2843
0 years, female, NA, stage:T3N0M0, alive, 674 days
39.7
U1155
0 years, male, NA, stage:T4N1M0, alive, 1815 days
39.4
U0471
0 years, female, NA, stage:T3N1M0, alive, 1673 days
39.2
U1094
0 years, female, NA, stage:T4N1M0, alive, 1267 days
39.1
U3039
0 years, male, NA, stage:T4N1M1, dead, 366 days
39.1
U0385
0 years, male, NA, stage:T3N0M0, alive, 902 days
38.8
U0245
0 years, female, NA, stage:T3N1M0, dead, 564 days
38.6
U0340
0 years, female, NA, stage:T4N2M1, dead, 438 days
38.5
U0073
0 years, male, NA, stage:T4N0MX, dead, 318 days
38.5
U0166
0 years, female, NA, stage:T3N0M0, alive, 763 days
38.0
U0275
0 years, female, NA, stage:T3N2M0, alive, 549 days
37.9
U0169
0 years, male, NA, stage:T4N2M0, alive, 616 days
37.7
U1301
0 years, female, NA, stage:T4N2M0, dead, 877 days
37.6
U1104
0 years, female, NA, stage:T4N0M0, alive, 1109 days
37.5
U0356
0 years, male, NA, stage:T4N1M0, alive, 536 days
37.5
U0937
0 years, male, NA, stage:T2N0M0, dead, 1558 days
36.8
U2948
0 years, female, NA, stage:T3N1M0, alive, 543 days
36.8
U1103
0 years, female, NA, stage:T4N2M0, alive, 975 days
36.5
U0949
0 years, female, NA, stage:T3N0M1, dead, 594 days
36.1
U3032
0 years, female, NA, stage:T3N1M0, alive, 449 days
36.1
U0908
0 years, female, NA, stage:T3N0M1, dead, 40 days
36.0
U0308
0 years, male, NA, stage:T4N1M0, alive, 1075 days
36.0
U1204
0 years, male, NA, stage:T4N2M0, alive, 2214 days
35.9
U0354
0 years, male, NA, stage:T3N1M0, alive, 430 days
35.7
U0438
0 years, female, NA, stage:T3N0M0, alive, 2009 days
35.7
U1352
0 years, male, NA, stage:T3N2M1, dead, 741 days
34.6
U0474
0 years, male, NA, stage:T3N1M0, alive, 1017 days
34.4
U0227
0 years, female, NA, stage:T4N2M0, alive, 291 days
34.4
U0420
0 years, male, NA, stage:T4N1M1, alive, 417 days
34.0
U0357
0 years, female, NA, stage:T3N0M0, alive, 2285 days
33.9
U0167
0 years, male, NA, stage:T3N1M0, alive, 1820 days
33.6
U0441
0 years, female, NA, stage:T2N1M0, alive, 2738 days
33.6
U0455
0 years, female, NA, stage:T3N2M0, alive, 2445 days
33.6
U1369
0 years, male, NA, stage:T3N0M0, dead, 1604 days
33.4
U1396
0 years, female, NA, stage:T4N0M0, alive, 1168 days
33.3
U1432
0 years, female, NA, stage:T3N1M0, alive, 577 days
33.3
U0348
0 years, female, NA, stage:T3N0M0, alive, 533 days
33.3
U0171
0 years, female, NA, stage:T3N1M0, dead, 1920 days
32.9
U0428
0 years, male, NA, stage:T4N1M1, alive, 1016 days
32.9
U0078
0 years, female, NA, stage:T3N0M0, alive, 1183 days
32.3
U0185
0 years, male, NA, stage:T1N0M0, alive, 1248 days
32.1
U0363
0 years, male, NA, stage:T3N1M0, alive, 3601 days
32.0
U2896
0 years, female, NA, stage:T3N1M0, alive, 609 days
31.9
U0421
0 years, male, NA, stage:T3N1M0, alive, 674 days
31.7
U1049
0 years, female, NA, stage:T3N1M0, alive, 1200 days
31.6
U3012
0 years, male, NA, stage:T3N0M0, alive, 472 days
31.5
U0162
0 years, female, NA, stage:T3N0M0, alive, 1488 days
31.4
U1041
0 years, male, NA, stage:T2N0M0, alive, 1108 days
31.4
U2971
0 years, male, NA, stage:T4aN0M0, alive, 629 days
31.3
U1045
0 years, female, NA, stage:T4N2M0, alive, 1239 days
31.1
U1366
0 years, male, NA, stage:T3N1M0, alive, 2010 days
31.1
U0148
0 years, male, NA, stage:T3N0M0, alive, 1780 days
31.0
U1022
0 years, male, NA, stage:T4N2M0, dead, 61 days
31.0
U0267
0 years, male, NA, stage:T4N0M0, dead, 445 days
31.0
U0163
0 years, male, NA, stage:T4N0M0, alive, 697 days
31.0
U0929
0 years, male, NA, stage:T4N1M0, alive, 436 days
30.9
U0589
0 years, female, NA, stage:T3N0M0, alive, 1176 days
30.9
U0239
0 years, male, NA, stage:T2N0M0, alive, 67 days
30.9
U0590
0 years, female, NA, stage:T3N0M0, alive, 661 days
30.8
U0095
0 years, male, NA, stage:T4N1M0, dead, 1034 days
30.7
U0179
0 years, male, NA, stage:T3N1M0, dead, 1043 days
30.7
U0278
0 years, female, NA, stage:T2N0M0, alive, 763 days
30.6
U3043
0 years, female, NA, stage:T3N2M0, alive, 287 days
30.6
U3038
0 years, male, NA, stage:T3N0M0, alive, 328 days
30.5
U1276
0 years, male, NA, stage:T3N0M0, alive, 2474 days
30.5
U1303
0 years, male, NA, stage:T4N1M0, alive, 2283 days
30.5
U3048
0 years, male, NA, stage:T4N2M0, alive, 535 days
30.3
U1034
0 years, male, NA, stage:T4N0M0, alive, 1575 days
30.2
U1130
0 years, male, NA, stage:T2N1M0, alive, 913 days
30.2
U3034
0 years, female, NA, stage:T3N1M0, alive, 443 days
30.1
U0127
0 years, female, NA, stage:T3N0M0, dead, 2753 days
30.0
U1074
0 years, male, NA, stage:T3N0M0, dead, 1043 days
30.0
U2848
0 years, female, NA, stage:T4N2M0, alive, 669 days
30.0
U0967
0 years, male, NA, stage:T2N0M0, dead, 1691 days
29.8
U0161
0 years, male, NA, stage:T4N2M1, alive, 42 days
29.7
U0360
0 years, female, NA, stage:T3N0M0, dead, 1016 days
29.7
U1253
0 years, female, NA, stage:T3N0M0, dead, 165 days
29.7
U0200
0 years, female, NA, stage:T3N0M0, alive, 2614 days
29.7
U0141
0 years, male, NA, stage:T3N2M0, alive, 2079 days
29.6
U0199
0 years, female, NA, stage:T4N2M0, alive, 1372 days
29.4
U0462
0 years, female, NA, stage:T4N1M0, alive, 1017 days
29.3
U1483
0 years, female, NA, stage:T3N0M0, alive, 1094 days
29.3
U2964
0 years, male, NA, stage:T3N1M0, alive, 637 days
29.0
U0144
0 years, male, NA, stage:T3N0M0, alive, 1218 days
28.9
U0387
0 years, male, NA, stage:T2N0M0, alive, 1327 days
28.8
U0090
0 years, female, NA, stage:T3N0M0, dead, 1258 days
28.7
U0121
0 years, male, NA, stage:T4N2M0, alive, 655 days
28.7
U0469
0 years, male, NA, stage:T3N0M0, dead, 409 days
28.6
U0396
0 years, male, NA, stage:T4N2M0, alive, 2243 days
28.6
U1099
0 years, female, NA, stage:T3N0M0, alive, 2068 days
28.5
U1018
0 years, male, NA, stage:T4N1M1, dead, 1693 days
28.4
U0382
0 years, female, NA, stage:T3N0M0, alive, 2550 days
28.4
U0131
0 years, female, NA, stage:T4N2M1, alive, 238 days
28.1
U0313
0 years, male, NA, stage:T4N1M0, dead, 1142 days
28.1
U1321
0 years, male, NA, stage:T3N1M0, alive, 2578 days
28.1
U3022
0 years, male, NA, stage:T2N0M0, alive, 484 days
28.1
U0463
0 years, male, NA, stage:T3N0M0, alive, 946 days
28.0
U3122
0 years, female, NA, stage:T3N0M1, dead, 91 days
28.0
U0316
0 years, male, NA, stage:T3N2M0, alive, 2012 days
27.9
U0089
0 years, female, NA, stage:T1NXM0, dead, 2365 days
27.8
U0323
0 years, male, NA, stage:T2N0M0, dead, 1016 days
27.8
U0202
0 years, male, NA, stage:T3N0M0, dead, 2670 days
27.8
U0203
0 years, male, NA, stage:T3N0M0, dead, 827 days
27.8
U2753
0 years, female, NA, stage:T2N0M0, alive, 813 days
27.8
U0314
0 years, female, NA, stage:T1N0M0, dead, 2436 days
27.7
U3024
0 years, female, NA, stage:T3N0M0, alive, 463 days
27.7
U1241
0 years, male, NA, stage:T3N1M0, dead, 49 days
27.7
U0244
0 years, female, NA, stage:T3N1M0, alive, 3184 days
27.7
U0991
0 years, male, NA, stage:T4N2M0, dead, 534 days
27.6
U2947
0 years, female, NA, stage:T3N0M0, alive, 543 days
27.5
U0472
0 years, male, NA, stage:TXN2M0, alive, 542 days
27.5
U1447
0 years, male, NA, stage:T4N1M0, alive, 988 days
27.5
U1292
0 years, female, NA, stage:T4N1M0, alive, 1147 days
27.4
U0280
0 years, male, NA, stage:T3N1M1, alive, 2731 days
27.4
U1040
0 years, male, NA, stage:T2N0M0, alive, 1029 days
27.3
U0972
0 years, female, NA, stage:T1N0M0, alive, 2473 days
27.3
U0950
0 years, female, NA, stage:T4N1M0, alive, 1834 days
27.2
U2999
0 years, female, NA, stage:T2N0M0, alive, 581 days
27.2
U1343
0 years, female, NA, stage:T4N2M0, alive, 3178 days
27.1
U0292
0 years, male, NA, stage:T4N1M0, alive, 1666 days
27.1
U0942
0 years, male, NA, stage:T3N0M0, alive, 665 days
27.1
U0225
0 years, male, NA, stage:T3N1M0, alive, 581 days
27.1
U0984
0 years, female, NA, stage:T4N0M0, alive, 1287 days
27.1
U0110
0 years, female, NA, stage:T3N1M1, dead, 878 days
26.9
U0444
0 years, female, NA, stage:T4N1M0, alive, 1841 days
26.8
U3042
0 years, male, NA, stage:T3N0M0, alive, 324 days
26.7
U2837
0 years, female, NA, stage:T4N1M0, alive, 681 days
26.7
U2953
0 years, female, NA, stage:T4aN0M0, alive, 541 days
26.7
U2861
0 years, male, NA, stage:T3N0M0, alive, 652 days
26.7
U0288
0 years, male, NA, stage:T1N0M0, alive, 1513 days
26.6
U1213
0 years, female, NA, stage:T2N0M0, alive, 560 days
26.6
U0450
0 years, female, NA, stage:T3N1M0, alive, 763 days
26.5
U1188
0 years, female, NA, stage:T3N0M0, dead, 967 days
26.5
U0326
0 years, female, NA, stage:T3N0M0, alive, 3178 days
26.5
U0108
0 years, female, NA, stage:T3N0M1, alive, 535 days
26.5
U0433
0 years, male, NA, stage:T4N1M1, dead, 440 days
26.4
U0069
0 years, female, NA, stage:T4N2M0, dead, 135 days
26.4
U0180
0 years, male, NA, stage:T3N0M1, dead, 965 days
26.4
U0135
0 years, female, NA, stage:T3N0M0, alive, 1738 days
26.3
U1086
0 years, female, NA, stage:T1N0M0, alive, 2907 days
26.3
U0217
0 years, female, NA, stage:T3N0M0, dead, 538 days
26.3
U2942
0 years, male, NA, stage:T2N0M0, alive, 549 days
26.3
U1145
0 years, female, NA, stage:T3N0M0, dead, 445 days
26.3
U0063
0 years, male, NA, stage:T1N0M0, dead, 1779 days
26.2
U1078
0 years, female, NA, stage:T3N0M0, alive, 1016 days
26.2
U0416
0 years, male, NA, stage:T1N1M0, alive, 1228 days
26.2
U0004
0 years, female, NA, stage:T4N0M0, alive, 3649 days
26.2
U0413
0 years, male, NA, stage:T2N0M0, alive, 1228 days
26.1
U1208
0 years, female, NA, stage:T1N0M0, alive, 834 days
26.1
U0915
0 years, female, NA, stage:T3N0M0, alive, 1613 days
26.1
U3100
0 years, male, NA, stage:T3N1M0, dead, 1608 days
26.1
U0091
0 years, male, NA, stage:T3N0M0, alive, 520 days
26.1
U0210
0 years, male, NA, stage:T3N0M0, dead, 1800 days
26.1
U0376
0 years, male, NA, stage:T2N1M0, alive, 965 days
26.1
U2889
0 years, male, NA, stage:T4N0M0, alive, 623 days
26.0
U3008
0 years, female, NA, stage:T2N0M0, alive, 473 days
25.9
U0123
0 years, male, NA, stage:T3N0M0, dead, 1880 days
25.9
U0399
0 years, female, NA, stage:T4N2M0, dead, 547 days
25.9
U0221
0 years, male, NA, stage:T3N0M0, alive, 569 days
25.8
U3050
0 years, female, NA, stage:T3N0M0, alive, 407 days
25.7
U0297
0 years, female, NA, stage:T3N2M0, alive, 1196 days
25.7
U0085
0 years, male, NA, stage:T4N1M0, dead, 1698 days
25.6
U0460
0 years, female, NA, stage:T3N0M0, dead, 2069 days
25.5
U0336
0 years, female, NA, stage:T3N0M0, alive, 1100 days
25.5
U2981
0 years, male, NA, stage:T3N0M0, alive, 508 days
25.4
U1047
0 years, female, NA, stage:T4N2M0, alive, 3592 days
25.4
U0183
0 years, male, NA, stage:T3N1M1, dead, 2957 days
25.4
U1317
0 years, male, NA, stage:T4N1M0, alive, 965 days
25.3
U0182
0 years, female, NA, stage:T4N1M0, dead, 260 days
25.3
U1332
0 years, male, NA, stage:T3N0M0, alive, 1672 days
25.2
U0204
0 years, male, NA, stage:T3N0M0, dead, 770 days
25.2
U0939
0 years, male, NA, stage:T3N1M0, alive, 2960 days
25.2
U0094
0 years, female, NA, stage:T3N2M0, alive, 741 days
25.1
U0345
0 years, female, NA, stage:T3N0M0, alive, 2127 days
25.0
U0309
0 years, female, NA, stage:T3N0M0, dead, 1898 days
25.0
U2782
0 years, male, NA, stage:T3N1M1, alive, 773 days
25.0
U0112
0 years, female, NA, stage:T3N0M1, alive, 551 days
25.0
U0938
0 years, female, NA, stage:T3N0M0, dead, 1231 days
25.0
U0390
0 years, male, NA, stage:T3N1M0, alive, 871 days
25.0
U0451
0 years, female, NA, stage:T4N2M0, alive, 3023 days
25.0
U2995
0 years, female, NA, stage:T3N1M0, alive, 491 days
25.0
U0328
0 years, male, NA, stage:T4N0M0, dead, 1362 days
24.9
U1065
0 years, female, NA, stage:T3N2M0, alive, 2954 days
24.9
U0306
0 years, male, NA, stage:T3N1M0, dead, 717 days
24.8
U1127
0 years, female, NA, stage:T3N0M0, alive, 3465 days
24.8
U2842
0 years, female, NA, stage:T4N2M0, alive, 675 days
24.7
U1220
0 years, male, NA, stage:T3N2M0, dead, 1953 days
24.7
U1349
0 years, female, NA, stage:T3N1M0, alive, 1899 days
24.7
U0369
0 years, female, NA, stage:T3N0M0, dead, 1095 days
24.7
U0070
0 years, male, NA, stage:T1N0M0, dead, 1319 days
24.7
U0106
0 years, female, NA, stage:T3N1M0, dead, 653 days
24.7
U0263
0 years, female, NA, stage:T3N0M1, alive, 362 days
24.6
U1239
0 years, male, NA, stage:T2N0M0, dead, 1998 days
24.6
U2798
0 years, male, NA, stage:T3N0M0, alive, 751 days
24.6
U0084
0 years, male, NA, stage:T3N0M0, dead, 1662 days
24.6
U0066
0 years, male, NA, stage:T3N0M0, dead, 2486 days
24.6
U0456
0 years, male, NA, stage:T4N0M0, dead, 2222 days
24.6
U0259
0 years, female, NA, stage:T4N2M0, alive, 76 days
24.5
U1274
0 years, male, NA, stage:T2N1M0, alive, 1198 days
24.5
U0122
0 years, female, NA, stage:T2N0M0, dead, 159 days
24.5
U0312
0 years, female, NA, stage:T4N2M1, alive, 499 days
24.4
U2958
0 years, female, NA, stage:T1N0M0, alive, 536 days
24.4
U0439
0 years, male, NA, stage:T3N1M0, alive, 1418 days
24.4
U3051
0 years, male, NA, stage:T3N2M0, alive, 415 days
24.4
U2927
0 years, male, NA, stage:T3N1M0, alive, 564 days
24.3
U0379
0 years, male, NA, stage:T2N0M0, alive, 1819 days
24.3
U1421
0 years, female, NA, stage:T3N1M0, alive, 1905 days
24.3
U0459
0 years, female, NA, stage:T3N0M0, alive, 966 days
24.3
U0196
0 years, male, NA, stage:T3N0M0, alive, 2086 days
24.3
U0104
0 years, female, NA, stage:T4N0M0, dead, 1639 days
24.3
U0426
0 years, male, NA, stage:T3N0M0, dead, 976 days
24.3
U1252
0 years, female, NA, stage:T4N2M0, alive, 1309 days
24.3
U1344
0 years, female, NA, stage:T3N1M0, alive, 1450 days
24.2
U0198
0 years, male, NA, stage:T3N1M0, alive, 1272 days
24.2
U0916
0 years, female, NA, stage:T3N0M0, alive, 1578 days
24.2
U0285
0 years, female, NA, stage:T3N0M0, alive, 2165 days
24.1
U2979
0 years, male, NA, stage:T3N2M0, alive, 616 days
24.1
U1486
0 years, female, NA, stage:T4N0M0, alive, 1606 days
24.1
U0403
0 years, male, NA, stage:T3N1M1, dead, 1809 days
24.1
U2891
0 years, male, NA, stage:T3N1M0, alive, 619 days
24.0
U0222
0 years, female, NA, stage:T3N2M1, alive, 1779 days
24.0
U1374
0 years, male, NA, stage:T4N0M0, alive, 827 days
24.0
U0389
0 years, female, NA, stage:T3N1M0, dead, 927 days
24.0
U1212
0 years, female, NA, stage:T2N0M0, alive, 69 days
24.0
U1069
0 years, female, NA, stage:T3N0M0, dead, 2187 days
24.0
U0303
0 years, female, NA, stage:T3N0M0, alive, 2847 days
24.0
U1141
0 years, female, NA, stage:T4N1M1, dead, 596 days
24.0
U0168
0 years, male, NA, stage:T3N0M0, dead, 948 days
24.0
U0081
0 years, male, NA, stage:T3N2M0, dead, 248 days
23.9
U0103
0 years, female, NA, stage:T3N1M0, alive, 1197 days
23.9
U0176
0 years, male, NA, stage:T3N1M0, alive, 2600 days
23.9
U0068
0 years, female, NA, stage:T3N1M0, alive, 1991 days
23.9
U0218
0 years, female, NA, stage:T3N0M0, alive, 714 days
23.9
U0302
0 years, male, NA, stage:T1N0M0, alive, 892 days
23.8
U0404
0 years, female, NA, stage:T3N2M0, dead, 204 days
23.8
U2959
0 years, male, NA, stage:T3N2M0, alive, 536 days
23.7
U2815
0 years, female, NA, stage:T3N0M0, alive, 717 days
23.7
U1037
0 years, male, NA, stage:T4N0M0, alive, 1658 days
23.7
U0149
0 years, female, NA, stage:T3N2M0, alive, 1715 days
23.7
U1062
0 years, female, NA, stage:T4N0M0, alive, 1689 days
23.7
U0172
0 years, male, NA, stage:T4N0M0, dead, 678 days
23.7
U1448
0 years, male, NA, stage:T3N0M1, dead, 1512 days
23.7
U0215
0 years, male, NA, stage:T3N0M0, alive, 1269 days
23.7
U0445
0 years, female, NA, stage:T3N0M0, alive, 1851 days
23.6
U3025
0 years, male, NA, stage:T4N2M1, alive, 377 days
23.6
U0368
0 years, male, NA, stage:T2N0M0, alive, 801 days
23.6
U0157
0 years, male, NA, stage:T4N0M0, dead, 131 days
23.5
U1474
0 years, female, NA, stage:T1N0MX, alive, 2012 days
23.5
U0352
0 years, female, NA, stage:T4N2M0, dead, 385 days
23.5
U1162
0 years, male, NA, stage:T2N1M0, dead, 354 days
23.4
U1102
0 years, male, NA, stage:T2N0M0, alive, 1354 days
23.4
U0453
0 years, male, NA, stage:T3N0M0, alive, 2859 days
23.4
U0268
0 years, male, NA, stage:T3N0M0, alive, 2978 days
23.3
U0400
0 years, male, NA, stage:T4N0M0, dead, 1073 days
23.3
U0977
0 years, female, NA, stage:T4N2M0, dead, 140 days
23.3
U0342
0 years, male, NA, stage:T4N2M0, alive, 305 days
23.3
U0370
0 years, female, NA, stage:T3N0M0, alive, 1047 days
23.3
U2975
0 years, male, NA, stage:T4N1M0, alive, 514 days
23.3
U0447
0 years, male, NA, stage:T4N1M0, dead, 1819 days
23.1
U1327
0 years, female, NA, stage:T3N0M0, alive, 1613 days
23.1
U1150
0 years, female, NA, stage:T3N0M0, alive, 15 days
23.1
U0375
0 years, male, NA, stage:T3N0M0, dead, 666 days
23.0
U0209
0 years, male, NA, stage:T3N1M0, alive, 2109 days
23.0
U0290
0 years, male, NA, stage:T4N2M0, dead, 593 days
22.9
U0235
0 years, female, NA, stage:T3N0M0, alive, 1327 days
22.9
U0966
0 years, male, NA, stage:T4N0M0, dead, 1513 days
22.9
U0277
0 years, male, NA, stage:T2N1M0, alive, 270 days
22.8
U0133
0 years, female, NA, stage:T3N0M0, alive, 773 days
22.8
U0355
0 years, male, NA, stage:T4N1M0, dead, 1038 days
22.8
U2774
0 years, female, NA, stage:T3N0M0, alive, 783 days
22.7
U3029
0 years, male, NA, stage:T2N0M0, alive, 475 days
22.7
U0383
0 years, male, NA, stage:T3N2M1, dead, 595 days
22.7
U1347
0 years, female, NA, stage:T3N0M0, alive, 1401 days
22.7
U2935
0 years, male, NA, stage:T4N1M0, alive, 555 days
22.7
U1129
0 years, male, NA, stage:T3N0M0, dead, 118 days
22.6
U0424
0 years, male, NA, stage:T3N0M0, alive, 2192 days
22.6
U0365
0 years, female, NA, stage:T4N1M0, dead, 313 days
22.6
U0152
0 years, male, NA, stage:T3N1M0, alive, 989 days
22.6
U0175
0 years, male, NA, stage:T3N2M0, alive, 1875 days
22.6
U0229
0 years, female, NA, stage:TXN2M1, dead, 2115 days
22.6
U1111
0 years, female, NA, stage:T3N0M0, dead, 1631 days
22.6
U0266
0 years, female, NA, stage:T3N1M0, dead, 2221 days
22.5
U0318
0 years, male, NA, stage:T3N0M0, alive, 762 days
22.5
U0105
0 years, female, NA, stage:T2N0M0, dead, 2158 days
22.5
U1095
0 years, female, NA, stage:T3N1M1, alive, 2425 days
22.5
U3005
0 years, male, NA, stage:T3N0M0, alive, 478 days
22.4
U0467
0 years, female, NA, stage:T3N0M0, alive, 1848 days
22.4
U0191
0 years, male, NA, stage:T3N1M0, alive, 900 days
22.3
U0231
0 years, female, NA, stage:T2N0M0, alive, 991 days
22.3
U0178
0 years, female, NA, stage:T3N1M0, dead, 2096 days
22.3
U1160
0 years, male, NA, stage:T3N1M0, alive, 1557 days
22.3
U0384
0 years, male, NA, stage:T2N1M1, alive, 1024 days
22.2
U1240
0 years, male, NA, stage:T4N0M0, alive, 765 days
22.2
U0177
0 years, female, NA, stage:T3N0M0, alive, 355 days
22.1
U1235
0 years, female, NA, stage:T2N0M0, alive, 1319 days
22.1
U0129
0 years, male, NA, stage:T4N0M0, dead, 1265 days
22.1
U0187
0 years, male, NA, stage:T3N2M0, alive, 1632 days
22.1
U0119
0 years, female, NA, stage:T3N0M0, alive, 3259 days
22.1
U0358
0 years, female, NA, stage:T4N1M0, alive, 2290 days
22.1
U0315
0 years, female, NA, stage:T2N0M0, alive, 1973 days
22.0
U0332
0 years, female, NA, stage:T3N0M0, alive, 2101 days
22.0
U1158
0 years, female, NA, stage:T3N1M0, alive, 721 days
22.0
U0442
0 years, male, NA, stage:T3N0M0, alive, 619 days
22.0
U0435
0 years, female, NA, stage:T2N0M0, alive, 3616 days
22.0
U1472
0 years, female, NA, stage:T3N1M0, alive, 1316 days
21.9
U0448
0 years, male, NA, stage:T3N2M0, alive, 3615 days
21.9
U3018
0 years, male, NA, stage:T4N1M0, alive, 463 days
21.9
U0392
0 years, male, NA, stage:T3N2M0, alive, 489 days
21.9
U0145
0 years, male, NA, stage:T3N1M1, alive, 623 days
21.9
U0249
0 years, female, NA, stage:T4N2M0, dead, 874 days
21.8
U0195
0 years, male, NA, stage:T3N0M0, alive, 3326 days
21.8
U0247
0 years, female, NA, stage:T3N1M0, alive, 2538 days
21.8
U0270
0 years, female, NA, stage:T1N0M0, alive, 2187 days
21.7
U1007
0 years, male, NA, stage:T3N0M0, alive, 1333 days
21.7
U0214
0 years, male, NA, stage:T4N1M1, alive, 788 days
21.7
U0414
0 years, male, NA, stage:T3N0M0, alive, 1691 days
21.6
U0134
0 years, male, NA, stage:T3N0M0, alive, 2009 days
21.6
U1429
0 years, female, NA, stage:T3N0M0, alive, 1660 days
21.5
U0361
0 years, male, NA, stage:T3N0M0, alive, 686 days
21.5
U0124
0 years, female, NA, stage:T1N0M0, alive, 2430 days
21.5
U0260
0 years, male, NA, stage:T1N0M1, alive, 2928 days
21.5
U0181
0 years, female, NA, stage:T1N0M0, alive, 3623 days
21.5
U1386
0 years, male, NA, stage:T3N1M0, alive, 1518 days
21.5
U0223
0 years, male, NA, stage:T4N1M0, alive, 1812 days
21.4
U0102
0 years, female, NA, stage:T4N2M0, dead, 670 days
21.4
U0289
0 years, female, NA, stage:T3N0M0, alive, 3511 days
21.3
U1147
0 years, male, NA, stage:T3N0M0, dead, 282 days
21.3
U0362
0 years, male, NA, stage:T3N0M0, alive, 1148 days
21.3
U1032
0 years, male, NA, stage:T3N1M0, alive, 2113 days
21.3
U2882
0 years, female, NA, stage:T3N1M0, alive, 637 days
21.3
U1031
0 years, male, NA, stage:T1N1M0, alive, 1625 days
21.3
U0287
0 years, female, NA, stage:T2N0M0, alive, 1897 days
21.2
U0158
0 years, male, NA, stage:T1N0M0, dead, 3101 days
21.2
U1251
0 years, male, NA, stage:T4N2M0, alive, 126 days
21.2
U1338
0 years, female, NA, stage:T4N1M0, dead, 716 days
21.2
U0429
0 years, female, NA, stage:T3N0M1, alive, 1099 days
21.1
U1073
0 years, female, NA, stage:T3N1M0, alive, 1359 days
21.1
U0207
0 years, female, NA, stage:T3N0M0, dead, 2593 days
21.1
U3000
0 years, female, NA, stage:T3N0M0, alive, 584 days
21.1
U0211
0 years, female, NA, stage:T3N1M0, alive, 1236 days
21.1
U0349
0 years, male, NA, stage:T3N1M0, alive, 2682 days
21.0
U0970
0 years, female, NA, stage:T4N1M0, alive, 939 days
21.0
U0882
0 years, male, NA, stage:T3N0M0, alive, 1675 days
20.9
U0099
0 years, female, NA, stage:T3N0M0, dead, 986 days
20.9
U0319
0 years, male, NA, stage:T3N0M0, alive, 2801 days
20.9
U0082
0 years, female, NA, stage:T3N1M0, dead, 2339 days
20.9
U0955
0 years, female, NA, stage:T3N0M0, alive, 2170 days
20.9
U2754
0 years, male, NA, stage:T4N0M0, alive, 809 days
20.9
U1392
0 years, male, NA, stage:T3N0M0, alive, 1513 days
20.9
U0987
0 years, female, NA, stage:T3N0M0, alive, 2482 days
20.8
U0464
0 years, male, NA, stage:T3N0M0, alive, 918 days
20.8
U0156
0 years, female, NA, stage:T4N1M0, alive, 1573 days
20.7
U0398
0 years, female, NA, stage:T3N0M0, alive, 721 days
20.7
U1067
0 years, male, NA, stage:T3N0M0, alive, 1570 days
20.7
U0136
0 years, female, NA, stage:T3N0M0, dead, 2795 days
20.7
U0233
0 years, female, NA, stage:T3N1M0, alive, 975 days
20.6
U0250
0 years, female, NA, stage:T4N0M0, dead, 906 days
20.6
U1044
0 years, male, NA, stage:T4N0M0, alive, 3146 days
20.6
U1122
0 years, female, NA, stage:T3N2M0, alive, 1675 days
20.5
U1120
0 years, male, NA, stage:T4N1M1, alive, 823 days
20.5
U1201
0 years, male, NA, stage:T3N2M0, alive, 1484 days
20.5
U1258
0 years, male, NA, stage:T3N1M0, alive, 1373 days
20.5
U0993
0 years, male, NA, stage:T4N2M0, alive, 1267 days
20.4
U0381
0 years, male, NA, stage:T3N1M0, dead, 71 days
20.4
U0067
0 years, female, NA, stage:T3N0M0, alive, 2180 days
20.4
U0186
0 years, female, NA, stage:T2N0M0, alive, 3726 days
20.4
U2956
0 years, female, NA, stage:T3N0M0, alive, 540 days
20.4
U0262
0 years, female, NA, stage:T2N0M0, alive, 2534 days
20.3
U0321
0 years, female, NA, stage:T3N0M0, alive, 1029 days
20.3
U0367
0 years, female, NA, stage:T3N1M0, alive, 3075 days
20.3
U2780
0 years, male, NA, stage:T3N0M0, alive, 778 days
20.3
U0344
0 years, male, NA, stage:T2N1M0, dead, 818 days
20.2
U1267
0 years, male, NA, stage:T3N1M0, dead, 2869 days
20.2
U0125
0 years, female, NA, stage:T1N0M0, dead, 668 days
20.2
U0143
0 years, male, NA, stage:T3N2M0, alive, 2313 days
20.2
U1436
0 years, female, NA, stage:T3N0M0, alive, 1745 days
20.1
U0295
0 years, male, NA, stage:T3N0M0, dead, 2572 days
20.1
U0151
0 years, female, NA, stage:T3N0M0, alive, 2014 days
20.1
U0411
0 years, female, NA, stage:T3N1M0, alive, 1868 days
20.1
U0254
0 years, female, NA, stage:T3N1M0, alive, 659 days
20.0
U0165
0 years, female, NA, stage:T2N0M0, alive, 1702 days
20.0
U0465
0 years, male, NA, stage:T3N0M0, alive, 2383 days
20.0
U0347
0 years, female, NA, stage:T4N1M1, alive, 628 days
19.9
U1454
0 years, female, NA, stage:T3N0M0, alive, 393 days
19.9
U0126
0 years, male, NA, stage:T3N0M0, dead, 2876 days
19.9
U0087
0 years, female, NA, stage:T3N2M0, dead, 337 days
19.8
U0257
0 years, male, NA, stage:T3N1M0, dead, 2508 days
19.8
U0072
0 years, male, NA, stage:T3N0M0, alive, 2772 days
19.8
U0333
0 years, female, NA, stage:T3N2M0, dead, 1959 days
19.7
U0269
0 years, female, NA, stage:T3N0M0, alive, 2530 days
19.6
U1184
0 years, male, NA, stage:T4N1M0, alive, 290 days
19.6
U0107
0 years, male, NA, stage:T3N0M0, dead, 2354 days
19.5
U0934
0 years, female, NA, stage:T3N0M0, alive, 1185 days
19.5
U0002
0 years, female, NA, stage:T3N2M0, alive, 3691 days
19.5
U0253
0 years, female, NA, stage:T3N0M0, alive, 958 days
19.5
U0100
0 years, female, NA, stage:T3N0M0, dead, 1920 days
19.3
U0083
0 years, male, NA, stage:T4N0M0, dead, 731 days
19.3
U3037
0 years, male, NA, stage:T3N1M0, alive, 405 days
19.2
U0999
0 years, male, NA, stage:T3N2M0, alive, 860 days
19.2
U0386
0 years, female, NA, stage:T4N1M1, alive, 2592 days
19.2
U0193
0 years, male, NA, stage:T3N1M0, dead, 876 days
19.1
U0113
0 years, male, NA, stage:T4N2M0, alive, 1102 days
19.1
U0281
0 years, male, NA, stage:T3N2M0, alive, 933 days
19.1
U0350
0 years, female, NA, stage:T4N0M0, alive, 770 days
19.0
U0246
0 years, female, NA, stage:T4N0M0, dead, 1192 days
19.0
U1264
0 years, female, NA, stage:T3N0M0, dead, 1583 days
19.0
U2819
0 years, female, NA, stage:T3N0M0, alive, 708 days
18.9
U0373
0 years, female, NA, stage:T3N0M0, alive, 1822 days
18.9
U1075
0 years, female, NA, stage:T3N0M0, alive, 1290 days
18.8
U0898
0 years, female, NA, stage:T4aN0M0, dead, 340 days
18.8
U1046
0 years, female, NA, stage:T4N2M1, dead, 697 days
18.7
U0234
0 years, male, NA, stage:T1N1M0, alive, 990 days
18.6
U2792
0 years, male, NA, stage:T2N1M0, alive, 758 days
18.5
U1017
0 years, male, NA, stage:T3N0M0, alive, 615 days
18.4
U0960
0 years, male, NA, stage:T3N0M0, alive, 1009 days
18.4
U1183
0 years, male, NA, stage:T4N2M0, alive, 959 days
18.3
U0338
0 years, female, NA, stage:T3N0M0, alive, 1016 days
18.3
U0378
0 years, female, NA, stage:T4N1M0, dead, 815 days
18.3
U1250
0 years, male, NA, stage:T2N0M0, alive, 597 days
18.3
U0449
0 years, female, NA, stage:T3N0M0, alive, 1851 days
18.2
U0115
0 years, female, NA, stage:T3N0M0, dead, 1738 days
18.2
U1246
0 years, female, NA, stage:T3N0M0, alive, 1441 days
18.2
U0146
0 years, female, NA, stage:T3N2M0, dead, 733 days
18.1
U0427
0 years, male, NA, stage:T2N0M0, alive, 1193 days
17.9
U1304
0 years, female, NA, stage:TXNXM0, alive, 1081 days
17.8
U0170
0 years, male, NA, stage:T4N1M0, dead, 832 days
17.8
U0377
0 years, female, NA, stage:T3N2M0, alive, 3720 days
17.6
U0473
0 years, male, NA, stage:T3N1M0, alive, 786 days
17.5
U0446
0 years, male, NA, stage:T2N0M0, alive, 1446 days
17.5
U0394
0 years, male, NA, stage:T2N1M0, alive, 969 days
17.5
U0153
0 years, female, NA, stage:T3N0M0, dead, 1718 days
17.4
U0401
0 years, male, NA, stage:T4N1M0, alive, 1715 days
17.4
U0256
0 years, male, NA, stage:T3N0M0, alive, 738 days
17.4
U0240
0 years, female, NA, stage:T3N1M0, dead, 800 days
17.3
U1228
0 years, male, NA, stage:T3N0M0, alive, 1333 days
17.2
U1071
0 years, female, NA, stage:T4N0M1, alive, 1514 days
17.1
U0189
0 years, female, NA, stage:T3N0M0, dead, 1823 days
17.0
U0208
0 years, female, NA, stage:T3N1M0, dead, 1233 days
17.0
U1059
0 years, male, NA, stage:T3N1M0, alive, 2790 days
17.0
U0335
0 years, female, NA, stage:T3N1M0, alive, 2464 days
16.9
U1346
0 years, female, NA, stage:T3N0M0, alive, 1137 days
16.8
U2856
0 years, female, NA, stage:T4N1M1, alive, 660 days
16.8
U1257
0 years, male, NA, stage:T3N0M0, alive, 833 days
16.8
U0397
0 years, male, NA, stage:T4N0M0, alive, 1663 days
16.5
U1060
0 years, male, NA, stage:T3N0M0, alive, 2442 days
16.4
U0098
0 years, male, NA, stage:T3N0M0, dead, 2473 days
16.3
U1114
0 years, female, NA, stage:TXNXM1, dead, 473 days
16.3
U0109
0 years, female, NA, stage:T4N2M1, alive, 144 days
16.3
U1446
0 years, female, NA, stage:T3N0M0, alive, 2314 days
16.2
U0224
0 years, female, NA, stage:T3N0M0, alive, 2367 days
16.1
U1401
0 years, female, NA, stage:T3N0M0, alive, 1482 days
15.9
U0111
0 years, male, NA, stage:T2N0M0, alive, 1117 days
15.9
U0976
0 years, female, NA, stage:T3N2M0, dead, 97 days
15.9
U0075
0 years, male, NA, stage:T3N0M0, dead, 3 days
15.8
U0307
0 years, male, NA, stage:T3N0M0, alive, 2921 days
15.8
U0317
0 years, female, NA, stage:T3N2M0, alive, 3209 days
15.7
U0236
0 years, male, NA, stage:T3N1M0, alive, 1842 days
15.7
U0092
0 years, male, NA, stage:T3N0M0, alive, 2779 days
15.6
U1473
0 years, female, NA, stage:T3N0M0, alive, 1553 days
15.6
U1107
0 years, male, NA, stage:T3N0M0, alive, 329 days
15.5
U0101
0 years, male, NA, stage:T3N1M1, alive, 1878 days
15.5
U1291
0 years, female, NA, stage:T3N0M0, alive, 2000 days
15.5
U3030
0 years, female, NA, stage:T3N0M0, alive, 380 days
15.3
U0443
0 years, male, NA, stage:T3N0M0, alive, 1677 days
15.3
U0274
0 years, male, NA, stage:T3N0M0, dead, 1570 days
15.2
U0154
0 years, male, NA, stage:T3N0M0, alive, 820 days
15.2
U0300
0 years, male, NA, stage:T2N0M0, alive, 974 days
14.8
U2928
0 years, male, NA, stage:T2N0M0, alive, 563 days
14.7
U0327
0 years, male, NA, stage:T4N0M0, alive, 833 days
14.4
U0142
0 years, female, NA, stage:T4N1M0, alive, 2340 days
14.3
U2747
0 years, female, NA, stage:T4N1M0, dead, 54 days
14.2
U0252
0 years, male, NA, stage:T3N1M0, dead, 1761 days
14.2
U0436
0 years, male, NA, stage:T4N1M1, alive, 960 days
14.1
U0117
0 years, female, NA, stage:T2N0M0, dead, 1078 days
13.8
U0933
0 years, male, NA, stage:T3N2M0, dead, 1960 days
13.6
U1072
0 years, male, NA, stage:T1N0M0, alive, 1446 days
13.4
U2803
0 years, male, NA, stage:T3N1M0, alive, 744 days
13.2
U1013
0 years, female, NA, stage:T2N1M0, alive, 1439 days
11.2
U2902
0 years, female, NA, stage:T2N0M0, alive, 596 days
8.6
U1384
0 years, male, NA, stage:T4N1M0, alive, 1319 days
0.4
U0074
0 years, female, NA, stage:T3N0M0, dead, 1438 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB3GAP2 is not prognostic in Rectum Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.9
Number of samples
88
Samples
Sample
Description
TPM
TCGA-AH-6643-01A
0 years, male, white, stage:Stage IIIC, dead, 1314 days
14.8
TCGA-DC-6160-01A
0 years, male, white, stage:Stage I, alive, 1339 days
14.7
TCGA-DC-6156-01A
0 years, male, white, stage:Stage IVA, alive, 943 days
11.6
TCGA-AH-6644-01A
0 years, male, white, stage:'--, alive, 838 days
11.0
TCGA-EI-6508-01A
0 years, female, white, stage:Stage IIIB, alive, 636 days
10.4
TCGA-EI-7004-01A
0 years, female, white, stage:'--, alive, 257 days
10.2
TCGA-G5-6572-01A
0 years, male, white, stage:'--, dead, 1432 days
10.0
TCGA-AF-6136-01A
0 years, female, white, stage:Stage IIIB, alive, 741 days
10.0
TCGA-F5-6464-01A
0 years, female, white, stage:Stage IIIC, dead, 303 days
9.9
TCGA-EI-6885-01A
0 years, female, white, stage:Stage IV, alive, 415 days
9.9
TCGA-DC-6158-01A
0 years, male, white, stage:Stage I, dead, 334 days
9.4
TCGA-AF-6672-01A
0 years, male, white, stage:Stage IV, alive, 748 days
9.1
TCGA-EI-7002-01A
0 years, male, white, stage:Stage IV, alive, 364 days
9.0
TCGA-EI-6884-01A
0 years, male, white, stage:Stage IIIA, alive, 328 days
9.0
TCGA-CL-5917-01A
0 years, female, white, stage:Stage IIIC, alive, 2376 days
8.6
TCGA-DC-6157-01A
0 years, male, black or african american, stage:Stage I, alive, 1581 days
8.5
TCGA-EI-6507-01A
0 years, male, white, stage:Stage IIA, alive, 607 days
8.5
TCGA-EI-6512-01A
0 years, female, white, stage:Stage IIIB, alive, 538 days
8.4
TCGA-AG-4021-01A
0 years, female, stage:Stage IV, dead, 121 days
8.3
TCGA-AG-3732-01A
0 years, female, stage:Stage I, alive, 1003 days
8.2
TCGA-AH-6549-01A
0 years, male, white, stage:'--, alive, 532 days
8.2
TCGA-CI-6620-01A
0 years, female, white, stage:Stage IVA, alive, 1009 days
8.0
TCGA-EI-6881-01A
0 years, male, white, stage:Stage IIIA, alive, 499 days
7.9
TCGA-EI-6506-01A
0 years, female, white, stage:Stage IIA, alive, 625 days
7.9
TCGA-DC-6683-01A
0 years, male, white, stage:Stage IIIB, alive, 762 days
7.9
TCGA-EF-5831-01A
0 years, male, white, stage:Stage IIA, alive, 127 days
7.8
TCGA-CI-6621-01A
0 years, male, white, stage:Stage IIIB, alive, 419 days
7.8
TCGA-EI-6513-01A
0 years, male, white, stage:Stage IIIB, alive, 497 days
7.7
TCGA-AH-6544-01A
0 years, male, white, stage:'--, alive, 1173 days
7.7
TCGA-DC-6682-01A
0 years, male, white, stage:Stage IIA, alive, 762 days
7.7
TCGA-AG-4022-01A
0 years, female, stage:Stage II, alive, 1400 days
7.5
TCGA-AH-6903-01A
0 years, male, white, stage:Stage IIIB, alive, 592 days
7.4
TCGA-F5-6864-01A
0 years, female, white, stage:Stage IIIB, alive, 379 days
7.3
TCGA-AG-3742-01A
0 years, female, stage:Stage I, alive, 30 days
7.3
TCGA-AG-3731-01A
0 years, male, stage:Stage IV, alive, 1126 days
7.2
TCGA-F5-6813-01A
0 years, male, white, stage:Stage IIIC, dead, 598 days
7.2
TCGA-F5-6811-01A
0 years, female, white, stage:Stage IIA, alive, 979 days
7.2
TCGA-EI-6882-01A
0 years, male, white, stage:Stage IIA, alive, 262 days
7.1
TCGA-EI-6917-01A
0 years, male, white, stage:Stage IIIA, alive, 531 days
7.1
TCGA-AF-2693-01A
0 years, male, white, stage:Stage I, alive, 1155 days
7.0
TCGA-DC-4749-01A
0 years, male, white, stage:Stage I, alive, 762 days
7.0
TCGA-G5-6235-01A
0 years, male, white, stage:Stage IIIB, alive, 1696 days
7.0
TCGA-DC-6681-01A
0 years, female, white, stage:Stage IVA, alive, 790 days
6.9
TCGA-F5-6465-01A
0 years, female, white, stage:Stage IIA, alive, 1506 days
6.9
TCGA-CL-4957-01A
0 years, female, stage:'--, dead, 425 days
6.7
TCGA-AF-2687-01A
0 years, male, white, stage:Stage IIIC, alive, 1427 days
6.6
TCGA-AG-3902-01A
0 years, male, stage:Stage IIA, alive, 974 days
6.6
TCGA-AF-A56K-01A
0 years, male, black or african american, stage:Stage IIA, alive, 2635 days
6.5
TCGA-EI-6509-01A
0 years, male, white, stage:Stage IIIC, alive, 517 days
6.4
TCGA-AH-6897-01A
0 years, male, white, stage:Stage I, alive, 804 days
6.4
TCGA-DY-A0XA-01A
0 years, female, white, stage:Stage IIA, alive, 3846 days
6.3
TCGA-DC-5869-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 943 days
6.3
TCGA-F5-6571-01A
0 years, female, white, stage:Stage IIA, alive, 1288 days
6.2
TCGA-AH-6547-01A
0 years, female, white, stage:'--, dead, 76 days
6.1
TCGA-AF-6655-01A
0 years, male, white, stage:Stage IIIA, alive, 609 days
6.1
TCGA-F5-6702-01A
0 years, male, white, stage:Stage IVA, dead, 869 days
6.1
TCGA-AF-4110-01A
0 years, male, white, stage:Stage IVA, alive, 912 days
6.0
TCGA-F5-6863-01A
0 years, female, white, stage:Stage IIIB, dead, 361 days
5.9
TCGA-F5-6814-01A
0 years, male, white, stage:Stage IIA, alive, 1131 days
5.8
TCGA-F5-6861-01A
0 years, female, white, stage:Stage IIA, alive, 1160 days
5.7
TCGA-EI-6514-01A
0 years, female, white, stage:Stage IIA, alive, 496 days
5.7
TCGA-AF-A56N-01A
0 years, female, black or african american, stage:Stage IIA, alive, 360 days
5.7
TCGA-DY-A1DE-01A
0 years, female, white, stage:Stage IIA, alive, 3932 days
5.7
TCGA-DC-6154-01A
0 years, female, white, stage:Stage IVA, alive, 365 days
5.6
TCGA-AF-3911-01A
0 years, male, white, stage:Stage IIIC, alive, 1148 days
5.6
TCGA-EI-6510-01A
0 years, female, white, stage:'--, alive, 556 days
5.5
TCGA-AG-3591-01A
0 years, female, stage:Stage IIA, alive, 1035 days
5.5
TCGA-CI-6622-01A
0 years, male, white, stage:Stage IIB, alive, 1362 days
5.4
TCGA-F5-6812-01A
0 years, male, white, stage:Stage IIA, alive, 1110 days
5.3
TCGA-EI-6511-01A
0 years, male, white, stage:Stage IIIB, alive, 482 days
5.3
TCGA-EF-5830-01A
0 years, male, white, stage:Stage IIB, alive, 106 days
5.1
TCGA-G5-6233-01A
0 years, male, white, stage:'--, dead, 556 days
5.1
TCGA-EI-6883-01A
0 years, male, white, stage:Stage IIC, alive, 350 days
5.1
TCGA-G5-6641-01A
0 years, male, white, stage:Stage IIIA, alive, 804 days
5.0
TCGA-AF-5654-01A
0 years, female, white, stage:Stage I, dead, 512 days
5.0
TCGA-DC-5337-01A
0 years, male, white, stage:Stage I, alive, 792 days
5.0
TCGA-AG-3592-01A
0 years, male, stage:Stage IIA, alive, 1035 days
4.9
TCGA-DY-A1H8-01A
0 years, female, white, stage:Stage IIIA, dead, 992 days
4.8
TCGA-BM-6198-01A
0 years, male, white, stage:Stage IIIB, alive, 646 days
4.7
TCGA-AF-2690-01A
0 years, female, white, stage:Stage IIIC, dead, 524 days
4.4
TCGA-DT-5265-01A
0 years, male, asian, stage:Stage II, alive, 384 days
4.4
TCGA-AF-A56L-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2007 days
4.3
TCGA-DC-4745-01A
0 years, female, white, stage:Stage IIIB, alive, 639 days
4.1
TCGA-DY-A1DD-01A
0 years, female, white, stage:Stage IIIB, dead, 1741 days
3.6
TCGA-DY-A1DC-01A
0 years, female, white, stage:Stage IIA, dead, 1258 days
3.5
TCGA-DY-A1DG-01A
0 years, male, white, stage:Stage IVA, dead, 1566 days
3.4
TCGA-DY-A1DF-01A
0 years, female, white, stage:Stage IIIC, dead, 734 days
3.2
TCGA-DC-6155-01A
0 years, female, white, stage:Stage IIIA, alive, 425 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB3GAP2 is not prognostic in Rectum Adenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.5
Number of samples
207
Samples
Sample
Description
TPM
U0431
0 years, female, NA, stage:T3N1M0, alive, 695 days
44.7
U0713
0 years, male, NA, stage:T2N0M0, alive, 359 days
39.5
U0484
0 years, male, NA, stage:T4N2M0, alive, 1275 days
38.8
U0276
0 years, male, NA, stage:T3N1M1, alive, 934 days
38.5
U0293
0 years, male, NA, stage:T3N1M0, alive, 2717 days
36.6
U2994
0 years, female, NA, stage:T4N1M0, alive, 132 days
35.8
U0216
0 years, male, NA, stage:T2N0M0, alive, 2684 days
35.2
U3049
0 years, male, NA, stage:T2N0M0, alive, 533 days
34.5
U0418
0 years, male, NA, stage:T4N1M0, alive, 1246 days
33.9
U0638
0 years, male, NA, stage:T2N0M0, alive, 1801 days
32.7
U0558
0 years, female, NA, stage:T3N2M0, alive, 2011 days
31.6
U0118
0 years, female, NA, stage:T3N2M0, dead, 350 days
31.3
U0643
0 years, female, NA, stage:T2N1M0, dead, 1583 days
31.3
U0079
0 years, male, NA, stage:T4N2M0, dead, 1891 days
31.2
U0652
0 years, male, NA, stage:T3N0M0, alive, 1319 days
31.1
U0809
0 years, female, NA, stage:T3N1M1, dead, 275 days
30.8
U2764
0 years, male, NA, stage:T3N2M0, alive, 440 days
30.6
U0857
0 years, male, NA, stage:T4N2M1, dead, 954 days
30.2
U0538
0 years, female, NA, stage:T3N1M0, alive, 1308 days
30.1
U0417
0 years, female, NA, stage:T3N2M1, dead, 893 days
30.1
U3023
0 years, female, NA, stage:T2N0M0, alive, 404 days
30.1
U0603
0 years, male, NA, stage:T2N1M0, alive, 1904 days
30.1
U0174
0 years, male, NA, stage:T3N0M0, alive, 450 days
30.0
U2834
0 years, male, NA, stage:T3N1M0, alive, 323 days
29.9
U2955
0 years, male, NA, stage:T3N1M0, alive, 181 days
29.6
U0220
0 years, male, NA, stage:T2N0M0, alive, 1066 days
29.5
U0114
0 years, male, NA, stage:T3N0M0, alive, 1910 days
29.3
U0296
0 years, male, NA, stage:T3N0M0, alive, 2610 days
29.0
U0468
0 years, female, NA, stage:T3N0M0, alive, 1921 days
29.0
U0562
0 years, female, NA, stage:T3N1M0, alive, 3092 days
29.0
U0565
0 years, male, NA, stage:T4N1M0, alive, 1452 days
28.9
U0498
0 years, female, NA, stage:T4N1M0, alive, 1906 days
28.8
U0532
0 years, male, NA, stage:T3N0M0, dead, 730 days
28.6
U0454
0 years, male, NA, stage:T3N1M0, alive, 2997 days
28.5
U0282
0 years, male, NA, stage:T3N2M0, dead, 1869 days
28.5
U0848
0 years, male, NA, stage:T3N1M1, dead, 1185 days
28.4
U0577
0 years, female, NA, stage:T3N2M0, alive, 2474 days
28.2
U0030
0 years, female, NA, stage:T2N0M0, dead, 987 days
28.2
U0561
0 years, female, NA, stage:T3N2M0, alive, 1577 days
27.9
U0849
0 years, female, NA, stage:T4N0M1, dead, 267 days
27.8
U0241
0 years, female, NA, stage:T2N1M0, alive, 552 days
27.5
U0173
0 years, male, NA, stage:T2N0M0, dead, 2375 days
27.3
U0820
0 years, male, NA, stage:T3NXM1, dead, 622 days
26.9
U0096
0 years, female, NA, stage:T4N2M1, dead, 257 days
26.9
U0555
0 years, male, NA, stage:T3N2M0, alive, 2043 days
26.8
U0374
0 years, female, NA, stage:T2N0M0, alive, 1067 days
26.7
U0128
0 years, female, NA, stage:T3N1M0, alive, 449 days
26.6
U0137
0 years, male, NA, stage:T3N1M0, dead, 1799 days
26.6
U0648
0 years, female, NA, stage:T3N0M0, alive, 1415 days
26.5
U3047
0 years, male, NA, stage:T3N2M0, alive, 205 days
26.4
U2943
0 years, male, NA, stage:T3N0M0, alive, 189 days
26.4
U2836
0 years, male, NA, stage:T3N0M0, alive, 322 days
26.4
U0305
0 years, male, NA, stage:T3N1M0, alive, 2676 days
26.1
U0802
0 years, male, NA, stage:T3N2M1, dead, 338 days
25.9
U0647
0 years, female, NA, stage:T3N0M0, alive, 1476 days
25.8
U0228
0 years, male, NA, stage:T2N0M0, alive, 963 days
25.7
U0406
0 years, female, NA, stage:T4N2M1, dead, 778 days
25.7
U0147
0 years, female, NA, stage:T3N0M0, dead, 2085 days
25.6
U0502
0 years, male, NA, stage:T4N1M0, alive, 1065 days
25.6
U0159
0 years, female, NA, stage:T3N1M0, alive, 1517 days
25.6
U0861
0 years, female, NA, stage:T4N2M1, dead, 184 days
25.6
U0800
0 years, male, NA, stage:T3N2M1, dead, 411 days
25.5
U0230
0 years, female, NA, stage:T1N1M0, alive, 3152 days
25.5
U0572
0 years, female, NA, stage:T3N1M0, alive, 2621 days
25.5
U0423
0 years, female, NA, stage:T4N2M0, alive, 2735 days
25.4
U0294
0 years, male, NA, stage:T4N0M1, alive, 561 days
25.1
U0366
0 years, male, NA, stage:T3NXM1, alive, 895 days
25.1
U0415
0 years, male, NA, stage:T3N1M0, alive, 2526 days
25.1
U0311
0 years, female, NA, stage:T3N1M0, alive, 1176 days
25.0
U0637
0 years, male, NA, stage:T3N1M0, alive, 1997 days
24.9
U0237
0 years, male, NA, stage:T3N1M0, alive, 2492 days
24.8
U0642
0 years, male, NA, stage:T3N0M0, alive, 1603 days
24.7
U0284
0 years, male, NA, stage:T3N2M0, alive, 581 days
24.7
U0343
0 years, female, NA, stage:T2N0M0, alive, 701 days
24.7
U0587
0 years, male, NA, stage:T3N1M0, alive, 2107 days
24.6
U0188
0 years, female, NA, stage:T3N1M0, alive, 2134 days
24.5
U0271
0 years, female, NA, stage:T3N1M0, alive, 2414 days
24.4
U0325
0 years, male, NA, stage:T3N0M0, dead, 1947 days
24.4
U0138
0 years, male, NA, stage:T3N1M0, dead, 2472 days
24.3
U0666
0 years, male, NA, stage:T3N1M0, alive, 709 days
24.2
U0457
0 years, male, NA, stage:T3N0M0, alive, 833 days
24.2
U0212
0 years, male, NA, stage:T3N0M1, alive, 1330 days
24.1
U0080
0 years, female, NA, stage:T3N0M0, dead, 489 days
24.0
U0242
0 years, male, NA, stage:T3N0M0, alive, 2950 days
23.9
U0422
0 years, female, NA, stage:T3N2M1, dead, 1710 days
23.9
U2761
0 years, female, NA, stage:T3N1M0, alive, 447 days
23.8
U0353
0 years, female, NA, stage:T1N0M0, alive, 2912 days
23.8
U0497
0 years, female, NA, stage:T3N1M0, alive, 1414 days
23.7
U0243
0 years, female, NA, stage:T3N2M0, alive, 2975 days
23.7
U0568
0 years, male, NA, stage:T4N1M0, alive, 1287 days
23.4
U0514
0 years, female, NA, stage:T2N2M0, alive, 2799 days
23.4
U0331
0 years, male, NA, stage:T3N1M1, dead, 906 days
23.2
U0675
0 years, female, NA, stage:T4N1M0, dead, 89 days
23.1
U0478
0 years, male, NA, stage:T4N2M0, alive, 2051 days
23.1
U0485
0 years, male, NA, stage:T3N0M0, dead, 2737 days
23.1
U0120
0 years, female, NA, stage:T3N0M0, alive, 3233 days
23.1
U0519
0 years, male, NA, stage:T4N2M0, dead, 519 days
23.0
U0865
0 years, female, NA, stage:T3N1M1, dead, 856 days
23.0
U0364
0 years, female, NA, stage:T4N2M1, dead, 151 days
22.9
U0430
0 years, male, NA, stage:T3N2M0, dead, 2472 days
22.9
U0116
0 years, male, NA, stage:T3N1M0, dead, 930 days
22.8
U0388
0 years, male, NA, stage:T2N1M0, alive, 2186 days
22.8
U0264
0 years, male, NA, stage:T4N2M0, alive, 2020 days
22.8
U0458
0 years, male, NA, stage:T3N2M0, alive, 1073 days
22.6
U0359
0 years, male, NA, stage:T3N2M0, dead, 2443 days
22.6
U0707
0 years, male, NA, stage:T3N1M0, alive, 518 days
22.6
U0657
0 years, female, NA, stage:T2N0M0, dead, 1109 days
22.6
U0409
0 years, female, NA, stage:T3N1M0, alive, 934 days
22.6
U0645
0 years, male, NA, stage:T3N0M0, alive, 1567 days
22.6
U0339
0 years, male, NA, stage:T3N2M0, alive, 2155 days
22.6
U0155
0 years, male, NA, stage:T2N0M0, dead, 1672 days
22.5
U0238
0 years, male, NA, stage:T3N0M0, dead, 868 days
22.5
U0255
0 years, female, NA, stage:T3N2M0, dead, 1079 days
22.4
U0258
0 years, male, NA, stage:T4N1M2, dead, 195 days
22.4
U0132
0 years, male, NA, stage:T3N1M0, alive, 1798 days
22.4
U0539
0 years, male, NA, stage:T4N2M0, alive, 2017 days
22.2
U2972
0 years, male, NA, stage:T3N0M0, alive, 161 days
22.2
U0663
0 years, female, NA, stage:T3N1M0, alive, 762 days
22.2
U0650
0 years, female, NA, stage:T2N2M0, alive, 1331 days
22.1
U0470
0 years, female, NA, stage:T2N2M0, alive, 961 days
22.1
U0651
0 years, male, NA, stage:T3N0M0, alive, 1354 days
22.1
U0750
0 years, female, NA, stage:T3N2M0, dead, 1393 days
22.1
U0407
0 years, male, NA, stage:T3N1M0, dead, 2027 days
22.0
U0534
0 years, female, NA, stage:T3N2M0, alive, 1361 days
21.9
U0804
0 years, female, NA, stage:T3N2M1, dead, 380 days
21.9
U0591
0 years, male, NA, stage:T2N0M0, alive, 1023 days
21.9
U0602
0 years, male, NA, stage:T2N0M0, alive, 1385 days
21.8
U0641
0 years, female, NA, stage:T3N0M0, dead, 1626 days
21.7
U0213
0 years, male, NA, stage:T3N1M0, alive, 3018 days
21.6
U0592
0 years, female, NA, stage:T2N0M0, dead, 670 days
21.6
U2991
0 years, female, NA, stage:T1N0M0, alive, 135 days
21.6
U0814
0 years, female, NA, stage:T3N1M1, dead, 482 days
21.6
U0192
0 years, male, NA, stage:T3N0M0, alive, 2081 days
21.6
U0578
0 years, male, NA, stage:T2N2M0, alive, 1724 days
21.5
U0077
0 years, female, NA, stage:T2N0M0, dead, 588 days
21.4
U0466
0 years, male, NA, stage:T3N0M0, alive, 1381 days
21.4
U0494
0 years, male, NA, stage:T4N2M0, alive, 1290 days
21.3
U0862
0 years, male, NA, stage:T4N2M1, dead, 1064 days
21.2
U0584
0 years, male, NA, stage:T3N2M0, alive, 2705 days
21.1
U0556
0 years, male, NA, stage:T3N2M0, alive, 2037 days
21.0
U0793
0 years, male, NA, stage:T3N1M1, dead, 195 days
20.9
U0405
0 years, male, NA, stage:T3N1M0, alive, 829 days
20.9
U0552
0 years, male, NA, stage:T3N2M0, alive, 1701 days
20.9
U0434
0 years, male, NA, stage:T2N0M0, alive, 2558 days
20.9
U0803
0 years, female, NA, stage:T3N1M1, dead, 495 days
20.7
U0593
0 years, male, NA, stage:T4bN0M0, alive, 876 days
20.6
U0512
0 years, male, NA, stage:T3N0M0, alive, 2550 days
20.6
U0579
0 years, female, NA, stage:T4aN0M0, alive, 2845 days
20.6
U0391
0 years, female, NA, stage:T3N0M0, alive, 1179 days
20.5
U0600
0 years, male, NA, stage:T3N1M0, alive, 1659 days
20.5
U0001
0 years, female, NA, stage:T3N0M0, alive, 3188 days
20.4
U0380
0 years, male, NA, stage:T2N0M0, alive, 2155 days
20.4
U0511
0 years, female, NA, stage:T3N0M0, dead, 2387 days
20.4
U0553
0 years, female, NA, stage:T3N2M0, alive, 1704 days
20.4
U0279
0 years, male, NA, stage:T2N1M0, dead, 176 days
20.3
U0322
0 years, male, NA, stage:T4N2M0, alive, 1694 days
20.3
U0694
0 years, male, NA, stage:T4N0M0, dead, 489 days
20.3
U0654
0 years, male, NA, stage:T3N2M0, alive, 1220 days
20.3
U0601
0 years, female, NA, stage:T4N1M0, alive, 1368 days
20.2
U0658
0 years, male, NA, stage:T3N2M0, alive, 1108 days
20.0
U0604
0 years, male, NA, stage:T3N1M0, alive, 1522 days
20.0
U0550
0 years, male, NA, stage:T3N2M0, alive, 2191 days
20.0
U0656
0 years, male, NA, stage:T3N2M0, alive, 1150 days
19.9
U0205
0 years, female, NA, stage:T3N2M0, alive, 2984 days
19.9
U0671
0 years, male, NA, stage:T3N1M0, dead, 785 days
19.8
U2960
0 years, male, NA, stage:T3N1M0, alive, 176 days
19.8
U0371
0 years, female, NA, stage:T3N0M0, alive, 2688 days
19.8
U0351
0 years, female, NA, stage:T3N2M0, alive, 2886 days
19.4
U0695
0 years, male, NA, stage:T3N0M0, alive, 566 days
19.4
U0557
0 years, female, NA, stage:T3N2M0, alive, 2009 days
19.3
U0402
0 years, female, NA, stage:T3N1M0, dead, 2487 days
19.3
U0334
0 years, male, NA, stage:T3N1M0, alive, 3171 days
19.2
U0581
0 years, female, NA, stage:T3N2M0, alive, 1660 days
19.1
U0298
0 years, male, NA, stage:T3N1M0, alive, 513 days
19.0
U0299
0 years, female, NA, stage:T4N2M0, alive, 43426 days
18.8
U0086
0 years, female, NA, stage:T3N1M0, dead, 594 days
18.6
U0640
0 years, male, NA, stage:T2N0M0, alive, 1696 days
18.6
U0437
0 years, male, NA, stage:T1N1M0, alive, 849 days
18.6
U0329
0 years, male, NA, stage:T3N1M0, dead, 805 days
18.5
U0649
0 years, male, NA, stage:T2N0M0, alive, 1424 days
18.4
U0346
0 years, male, NA, stage:T4N2M0, alive, 1148 days
18.3
U0194
0 years, male, NA, stage:T3N1M0, alive, 680 days
18.2
U0190
0 years, male, NA, stage:T3N0M0, alive, 2367 days
18.1
U0535
0 years, female, NA, stage:T4N1M0, alive, 2473 days
17.9
U0805
0 years, male, NA, stage:T3N1M1, dead, 731 days
17.7
U0232
0 years, female, NA, stage:T2N0M0, dead, 994 days
17.7
U0492
0 years, male, NA, stage:T3N2M0, alive, 1114 days
17.6
U0088
0 years, male, NA, stage:T3N1M1, dead, 260 days
17.5
U0533
0 years, male, NA, stage:T3N2M0, alive, 2248 days
17.3
U0251
0 years, male, NA, stage:T2N0M0, alive, 1906 days
17.3
U0304
0 years, male, NA, stage:T3N2M0, alive, 2065 days
17.1
U0545
0 years, male, NA, stage:T3N0M0, alive, 2340 days
16.7
U0852
0 years, male, NA, stage:T3N2M1, alive, 1651 days
16.7
U0508
0 years, male, NA, stage:T3N1M0, alive, 1120 days
16.6
U0594
0 years, male, NA, stage:T3N0M0, alive, 2852 days
16.5
U0776
0 years, male, NA, stage:T4N2M0, alive, 1702 days
16.5
U2779
0 years, male, NA, stage:T3N0M0, alive, 419 days
16.4
U0686
0 years, female, NA, stage:T4bN0M0, dead, 123 days
16.2
U0596
0 years, male, NA, stage:T3N0M0, alive, 2233 days
16.1
U0595
0 years, male, NA, stage:T2N0M0, alive, 2535 days
15.6
U0542
0 years, male, NA, stage:T3N2M0, dead, 1482 days
15.5
U0093
0 years, male, NA, stage:T3N2M0, dead, 1118 days
14.4
U0605
0 years, male, NA, stage:T2N0M0, alive, 952 days
14.1
U0140
0 years, male, NA, stage:T3N2M0, alive, 2655 days
13.6
U0097
0 years, male, NA, stage:T3N0M1, dead, 2903 days
13.5
U0324
0 years, female, NA, stage:T4N1M0, alive, 938 days
11.9
U0576
0 years, male, NA, stage:T3N2M0, alive, 2540 days
10.2
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COLON ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
197
Samples
Sample ID
Sample type
nRPX
642fc6c3-8d4a-4e3d-ad0a-cc088a_D2
Tumor
0.6
820a3f08-5bb1-44b3-a133-ee167e_D2
Tumor
0.6
c1b66358-d103-493c-b8ec-92c43b_D1
Tumor
0.5
a90eb718-6a8f-4cbf-89c1-f9e9bd_D2
Tumor
0.5
0f238226-864c-4de0-8c61-01e729_D2
Tumor
0.4
41ee934e-f7a3-4ef5-8a83-e2ac56_D2
Tumor
0.4
321fb3b2-ebb6-4ea5-b737-081264_D2
Tumor
0.4
f69deaeb-6b6f-4c61-8900-fd0f26_D3
Tumor
0.3
f9d6fb1b-988e-4D88-9272-cc672f_D8
Tumor
0.3
cd6a4013-2958-44b9-a4f1-45c9e4_D2
Tumor
0.3
8cc7e656-0152-4359-8566-0581c3
Tumor
0.3
db3f5ad9-d14d-4126-a3e7-d80faa_D3
Tumor
0.3
a467b905-fc0b-427b-8753-6d38dd_D3
Tumor
0.3
d3078fa8-0692-411f-8441-0c7c48_D8
Tumor
0.3
f6173181-0993-4a5f-a4cd-5f30b1_D2
Tumor
0.3
d0511ea6-43c3-4c61-b08e-cf49b7_D3
Tumor
0.3
e515eb5c-8005-416a-9b42-59de9d_D8
Tumor
0.3
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Tumor
0.3
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Tumor
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Normal
0.2
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Normal
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.2
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
0d5554d1-1653-4589-a44f-43113e_D2
Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Normal
0.1
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Tumor
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.1
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Tumor
0.1
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
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Normal
0.0
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Tumor
0.0
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Tumor
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
694e8df1-d9ee-473b-bec1-4f9237_D2
Normal
0.0
903d5fe0-970a-47be-a97f-3cc914_D2
Normal
0.0
1c070992-647b-4173-a481-904c4d_D2
Normal
0.0
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Normal
0.0
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Normal
0.0
9a6879b1-4f78-4ac6-9fca-dad049_D2
Normal
0.0
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Normal
0.0
b6b41ba2-6415-41aa-b5f5-4d47db_D2
Normal
0.0
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Normal
0.0
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Tumor
0.0
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Normal
0.0
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Normal
0.0
233ec093-9a30-4ef4-a12c-91757e_D2
Normal
0.0
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Normal
0.0
4c9dcc8c-ccdc-4336-8e23-107feb_D2
Normal
0.0
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Tumor
0.0
0f757044-9bc8-4ed4-90f3-e0a49a_D3
Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Tumor
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
6e0d04fc-e6a8-41ed-b6f3-45537d_D2
Normal
-0.1
3765c09a-fff7-4b37-bf2b-452b23_D2
Normal
-0.1
1f79fed9-f0d4-4c45-acd2-ea1441_D2
Normal
-0.1
bda3787a-1397-4716-bb17-4992a8_D2
Normal
-0.1
a2f03d85-5f1a-4b3e-9dbf-74e67e_D3
Tumor
-0.1
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Normal
-0.1
9a48cf57-e1f0-4ea1-9804-d563f2_D2
Normal
-0.1
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Normal
-0.1
b2978e90-cd2a-4665-b1bf-508a99_D2
Normal
-0.1
5e886f1c-8165-4232-9591-d80799_D2
Normal
-0.1
a313f6ef-5994-4d49-9e66-c26911_D2
Normal
-0.1
51590333-cfe5-4ce5-b8ff-58fa3c_D2
Normal
-0.1
1136008b-97ce-49b0-bf24-abbea6_D2
Normal
-0.1
a243b765-61ab-4aa6-88e1-226896_D2
Normal
-0.1
6b0a3188-d8ca-4d50-a377-a8fe4c_D2
Normal
-0.1
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Normal
-0.1
04ded2cd-3b57-4aec-9c11-48f58e_D2
Normal
-0.1
cd3a9d59-bf13-48f3-ae97-bdbca4_D2
Normal
-0.1
01d1ffca-4235-4dfe-bf62-56f71d_D3
Tumor
-0.1
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Normal
-0.1
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Tumor
-0.1
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Normal
-0.1
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Normal
-0.1
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Normal
-0.1
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Tumor
-0.2
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Normal
-0.2
76498650-fdbf-4f5d-a19a-cce9a2_D2
Normal
-0.2
cc271b3d-ed33-481f-9d23-15f2f6_D2
Normal
-0.2
d80408d6-598d-4411-ab34-eb2545_D2
Normal
-0.2
019cd0c0-733d-4b25-90e3-d54ce0_D2
Normal
-0.2
b4dd4a04-5eda-43dd-8298-215b07_D3
Tumor
-0.2
7cc7f69f-99f5-4b23-a9e0-ba0dc8_D8
Tumor
-0.2
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Normal
-0.2
1563ef63-d2e6-406f-adc1-255949_D3
Tumor
-0.2
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Tumor
-0.2
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Normal
-0.2
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Normal
-0.2
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Normal
-0.2
71b2c1cc-0a31-4ca8-8beb-251e17_D2
Normal
-0.2
e196a0b4-2a05-43de-bb30-ceb761_D2
Tumor
-0.2
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Normal
-0.3
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Tumor
-0.3
5271982c-5de1-4d6e-b414-b1f3ef_D2
Tumor
-0.3
526c3664-5b9b-4a2b-a00e-a14623_D2
Tumor
-0.3
Show allShow less
COLORECTAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
