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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1562.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
21521.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
10144.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6604.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5319.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
4434.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
3695.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
3269.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
3228.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
3114.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
2728.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
2724.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2562.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
2511.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
1754.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1682.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
1579.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
1529.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
1389.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
1280.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
1174.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
1157.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1088.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
1063.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
969.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
919.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
873.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
794.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
786.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
752.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
728.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
679.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
671.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
627.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
547.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
543.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
495.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
412.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
363.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
349.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
344.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
314.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
311.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
252.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
249.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
243.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
221.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
211.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
198.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
197.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
194.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
194.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
190.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
180.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
111.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
105.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
88.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
82.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
64.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
59.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
31.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
29.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
27.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
27.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1385.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14622.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
14375.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13833.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
12116.6
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
8326.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
8072.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
7613.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6630.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
6158.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6087.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
6014.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
5694.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
5584.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
4768.9
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
4674.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
4649.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4440.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
4252.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
4199.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
4094.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
4048.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
3923.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
3918.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
3870.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
3791.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
3766.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
3670.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
3414.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
3395.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
3360.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
3205.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
3203.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
3198.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
3189.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
3186.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
3180.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
3066.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
3002.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
2948.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
2945.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
2941.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2934.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2873.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
2850.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
2830.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
2811.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
2781.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
2775.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
2751.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
2749.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
2747.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
2739.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
2701.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
2693.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
2691.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
2637.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
2606.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
2590.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
2531.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
2515.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
2500.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
2500.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
2489.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
2465.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
2440.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
2440.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
2437.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
2434.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
2428.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
2393.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
2380.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
2356.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
2356.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
2266.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
2243.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
2205.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
2128.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
2127.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
2099.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
2094.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
2090.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
2089.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
2085.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
2068.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
2061.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
2037.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
2029.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
2017.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
2014.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
1997.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
1982.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
1957.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
1950.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
1944.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
1933.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
1909.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
1901.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
1874.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
1869.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
1852.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
1852.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
1837.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
1808.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
1802.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
1776.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
1775.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
1773.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
1771.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
1770.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
1747.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
1742.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
1742.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
1741.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
1732.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
1728.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
1718.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
1710.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
1710.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
1694.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
1679.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
1675.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
1658.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
1649.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
1644.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
1643.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
1643.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
1631.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
1623.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
1618.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
1617.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
1616.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1600.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
1599.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
1577.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
1566.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
1558.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
1546.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
1543.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
1534.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
1530.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
1519.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
1509.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
1508.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
1503.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
1496.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
1492.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
1491.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
1473.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
1463.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
1454.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
1453.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
1447.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
1444.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
1434.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
1433.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
1428.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
1426.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
1419.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
1415.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
1415.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
1398.6
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
1393.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
1376.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
1376.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
1374.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
1374.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
1371.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
1371.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
1371.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
1367.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
1364.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
1360.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
1347.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
1344.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1340.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
1339.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
1337.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
1335.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
1334.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
1333.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
1331.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
1330.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
1330.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
1329.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
1325.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
1322.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
1322.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
1314.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
1312.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
1312.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
1308.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
1296.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
1292.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
1290.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
1288.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
1281.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
1275.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
1274.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
1268.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
1260.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
1253.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
1252.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
1250.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
1248.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
1240.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
1238.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
1237.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
1232.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
1226.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
1221.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
1215.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
1203.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
1192.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
1192.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
1188.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
1186.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
1185.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
1184.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
1173.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
1172.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
1167.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
1165.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
1157.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
1155.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
1155.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
1150.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
1144.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
1142.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
1134.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
1131.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
1130.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
1129.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
1128.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
1128.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
1126.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
1119.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
1113.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
1113.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
1103.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
1098.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
1096.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
1093.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
1090.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
1089.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
1088.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
1087.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
1080.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
1079.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
1077.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
1077.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
1074.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
1068.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
1064.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
1063.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
1063.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
1056.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
1047.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
1043.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
1038.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
1034.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
1007.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
1007.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
997.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
995.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
994.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
994.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
985.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
984.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
972.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
971.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
961.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
953.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
951.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
949.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
945.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
941.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
937.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
928.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
920.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
918.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
914.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
912.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
904.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
900.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
899.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
898.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
889.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
877.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
876.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
876.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
873.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
870.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
869.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
857.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
852.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
852.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
850.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
841.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
836.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
834.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
833.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
833.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
833.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
830.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
830.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
827.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
822.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
806.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
804.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
803.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
803.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
798.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
798.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
793.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
791.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
788.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
788.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
788.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
787.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
779.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
772.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
770.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
770.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
767.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
761.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
755.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
755.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
754.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
754.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
752.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
751.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
746.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
746.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
737.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
736.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
736.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
736.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
734.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
733.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
732.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
729.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
721.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
719.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
718.1
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
716.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
714.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
711.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
709.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
708.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
706.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
699.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
699.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
698.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
692.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
690.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
688.9
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
686.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
684.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
683.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
681.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
676.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
671.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
667.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
666.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
662.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
662.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
660.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
655.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
653.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
646.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
643.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
635.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
633.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
627.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
626.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
620.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
618.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
614.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
613.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
612.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
610.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
610.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
607.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
604.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
604.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
600.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
600.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
598.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
596.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
591.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
590.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
585.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
579.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
575.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
575.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
566.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
565.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
564.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
564.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
557.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
554.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
550.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
547.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
546.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
543.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
541.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
536.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
532.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
532.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
530.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
530.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
523.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
520.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
520.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
519.7
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
519.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
516.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
513.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
512.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
508.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
505.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
501.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
500.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
497.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
494.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
493.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
491.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
489.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
488.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
488.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
487.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
481.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
477.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
477.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
475.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
474.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
470.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
438.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
436.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
427.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
424.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
422.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
419.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
417.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
410.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
406.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
403.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
403.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
402.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
393.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
375.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
368.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
364.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
361.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
360.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
360.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
355.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
351.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
350.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
348.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
347.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
342.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
340.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
337.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
336.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
331.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
327.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
323.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
322.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
321.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
317.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
317.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
316.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
316.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
313.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
311.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
307.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
301.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
295.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
293.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
290.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
288.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
287.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
279.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
268.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
268.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
267.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
257.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
252.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
247.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
235.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
230.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
230.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
225.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
220.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
209.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
190.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
190.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
188.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
185.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
181.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
179.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
171.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
161.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
160.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
154.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
120.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
109.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
106.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
105.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
100.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
88.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
88.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
84.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
83.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
83.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
79.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
75.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
44.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
36.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1921.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
9166.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
7451.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
5690.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
5562.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
5278.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
5168.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
4694.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
4567.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
4534.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
4424.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
4015.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
3861.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
3379.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
3211.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
3048.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
3046.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
3043.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
3024.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
2835.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
2789.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
2739.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
2690.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
2629.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
2596.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
2567.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
2539.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
2508.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
2487.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
2413.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
2133.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
2047.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
2042.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
2030.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
2023.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
1905.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
1849.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
1816.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
1814.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
1803.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
1743.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
1655.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
1608.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
1580.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
1559.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
1526.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
1517.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
1469.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
1456.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
1451.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
1422.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
1407.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
1377.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
1377.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
1348.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
1344.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
1341.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
1336.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
1256.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
1247.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
1241.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
1220.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
1167.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
1149.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
1136.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
1061.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
1015.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
984.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
960.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
931.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
924.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
918.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
917.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
880.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
871.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
870.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
860.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
851.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
846.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
841.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
839.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
804.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
772.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
765.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
708.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
688.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
687.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
668.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
642.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
633.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
628.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
618.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
568.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
543.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
509.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
468.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
408.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
378.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
335.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
295.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5493.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
26974.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
22060.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
21985.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
20353.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
18348.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
17694.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17098.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
15580.4
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
15507.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
15422.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
15300.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
14825.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
14123.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
13913.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
13907.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
13859.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
13573.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13536.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
13531.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
13163.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
13071.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
12666.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
12222.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
11925.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
11186.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
11039.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
10825.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
10743.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
10743.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
10674.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
10626.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10618.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10531.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
10365.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
10359.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
10331.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
10282.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
10013.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
9976.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
9895.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
9805.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
9720.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
9670.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
9560.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
9536.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
9468.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
9208.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
9085.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
9000.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8989.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
8742.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8726.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
8692.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
8666.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
8616.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
8499.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
8491.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
8298.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
7946.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
7925.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
7901.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
7893.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
7804.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
7800.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
7750.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
7735.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
7732.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7585.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
7539.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7517.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
7458.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
7373.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
7322.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
7192.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
7166.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
7136.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
7069.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
7057.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
7051.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
7031.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
6849.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
6825.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
6685.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
6676.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
6638.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
6621.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
6513.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
6438.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
6435.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
6352.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
6280.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
6255.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
6218.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
6184.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6176.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
6023.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
5988.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
5973.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
5963.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
5894.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
5867.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5849.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
5837.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
5825.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
5817.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
5773.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
5717.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
5711.8
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5553.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
5506.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
5475.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
5404.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
5396.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
5284.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
5242.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
5211.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
5058.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
5032.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
5002.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
4997.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
4953.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
4942.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
4920.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
4875.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
4853.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
4850.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
4837.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
4819.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
4762.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
4740.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
4673.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
4646.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
4645.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
4612.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
4605.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
4602.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
4570.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
4535.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
4534.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
4475.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
4474.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
4438.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
4406.5
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
4321.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
4301.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
4280.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4239.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
4237.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
4222.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
4184.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
4152.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4144.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
4063.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
4049.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
3958.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
3934.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3923.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
3874.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
3862.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
3844.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
3839.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
3834.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
3826.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
3818.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
3771.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
3697.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
3617.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
3574.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
3538.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3509.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
3495.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
3475.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
3466.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
3443.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
3436.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3435.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
3396.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
3372.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
3345.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
3299.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
3135.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
3086.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3070.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
3031.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
3029.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
2993.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
2992.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
2973.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
2965.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
2935.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
2932.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
2931.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2918.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2890.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2861.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2831.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
2827.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
2802.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
2794.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
2715.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
2694.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
2659.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
2649.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
2599.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
2592.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
2520.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2496.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
2496.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
2468.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
2457.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
2454.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
2449.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
2427.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
2384.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
2376.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
2291.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
2271.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
2264.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
2236.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2224.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2219.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
2211.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
2096.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2070.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
2065.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
2061.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
2042.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
2030.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
1994.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
1953.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
1836.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
1806.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
1800.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1786.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
1780.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
1741.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
1733.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
1723.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
1695.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
1687.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
1648.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
1630.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
1629.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1580.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1561.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
1558.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
1556.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
1532.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
1508.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
1444.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
1410.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1371.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
1340.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1300.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
1285.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
1285.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
1254.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1198.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
1156.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
1156.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
1143.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1061.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1059.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
1028.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
967.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
957.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
920.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
809.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
781.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
724.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
715.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
671.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
444.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
436.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
421.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
350.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
149.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
58.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
38.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
35.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
34.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
26.6
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084590001
Normal
3.4
CPT0075170001
Normal
3.0
CPT0001270001
Normal
2.3
CPT0076330003
Tumor
2.3
CPT0089040001
Normal
2.0
CPT0001190001
Normal
1.6
CPT0077320001
Normal
1.5
CPT0006530001
Normal
1.4
CPT0017850003
Tumor
1.2
CPT0063630003
Tumor
1.2
CPT0023350003
Tumor
1.1
CPT0084560003
Tumor
1.1
CPT0088710001
Normal
1.0
CPT0075570001
Normal
1.0
CPT0092190003
Normal
1.0
CPT0012550003
Tumor
0.8
CPT0063640001
Normal
0.7
CPT0017450001
Normal
0.6
CPT0000660001
Normal
0.6
CPT0012180003
Tumor
0.5
CPT0069160003
Tumor
0.5
CPT0011410003
Tumor
0.5
CPT0000640003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0092310003
Normal
0.4
CPT0020120003
Tumor
0.4
CPT0018250001
Normal
0.3
CPT0012280003
Tumor
0.2
CPT0079180003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0088570001
Normal
0.1
CPT0002350011
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0014130001
Normal
0.1
CPT0076350001
Normal
0.1
CPT0064370003
Tumor
0.0
CPT0078800003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0010120001
Normal
0.0
CPT0025050003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0017410003
Tumor
-0.1
CPT0092290003
Tumor
-0.1
CPT0078530001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0082010001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0086820003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0001350001
Normal
-0.2
CPT0069000003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0014160003
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0013790003
Normal
-0.3
CPT0009000003
Tumor
-0.3
CPT0065820001
Normal
-0.3
CPT0078510003
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0012290003
Normal
-0.3
CPT0066480003
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0086830003
Normal
-0.4
CPT0079300001
Normal
-0.4
CPT0012090003
Normal
-0.4
CPT0087050003
Normal
-0.5
CPT0007320003
Tumor
-0.5
CPT0023360001
Normal
-0.5
CPT0010170001
Normal
-0.5
CPT0026420001
Normal
-0.5
CPT0020130001
Normal
-0.5
CPT0025110003
Tumor
-0.5
CPT0001260009
Tumor
-0.5
CPT0012640003
Normal
-0.5
CPT0069010001
Normal
-0.6
CPT0079270003
Tumor
-0.6
CPT0088690003
Tumor
-0.6
CPT0012920003
Normal
-0.6
CPT0078840001
Normal
-0.6
CPT0065690003
Tumor
-0.6
CPT0088920001
Normal
-0.6
CPT0089020003
Tumor
-0.6
CPT0079510001
Normal
-0.6
CPT0077140001
Normal
-0.6
CPT0071150004
Tumor
-0.7
CPT0088780001
Normal
-0.7
CPT0015810003
Tumor
-0.7
CPT0019990003
Tumor
-0.7
CPT0079430001
Normal
-0.7
CPT0024670003
Tumor
-0.7
CPT0021240003
Tumor
-0.7
CPT0075560003
Tumor
-0.7
CPT0014470001
Normal
-0.7
CPT0064400001
Normal
-0.7
CPT0065870003
Tumor
-0.7
CPT0088480003
Tumor
-0.8
CPT0001550001
Normal
-0.8
CPT0088500001
Normal
-0.8
CPT0012770003
Normal
-0.8
CPT0012570003
Normal
-0.8
CPT0000790001
Normal
-0.8
CPT0078670001
Normal
-0.8
CPT0078940001
Normal
-0.8
CPT0025610001
Normal
-0.8
CPT0001510001
Normal
-0.8
CPT0063320003
Tumor
-0.8
CPT0079410003
Tumor
-0.8
CPT0023690003
Tumor
-0.8
CPT0086970003
Normal
-0.8
CPT0001340003
Tumor
-0.8
CPT0025060001
Normal
-0.8
CPT0089460004
Tumor
-0.8
CPT0012900004
Tumor
-0.8
CPT0086370003
Normal
-0.8
CPT0079480003
Tumor
-0.8
CPT0024680001
Normal
-0.8
CPT0012080003
Tumor
-0.9
CPT0077500001
Normal
-0.9
CPT0077110003
Tumor
-0.9
CPT0006900003
Tumor
-0.9
CPT0065930003
Tumor
-0.9
CPT0092790003
Tumor
-0.9
CPT0006950001
Normal
-0.9
CPT0086030003
Tumor
-0.9
CPT0000780007
Tumor
-0.9
CPT0086950003
Tumor
-0.9
CPT0092800003
Normal
-0.9
CPT0081620001
Normal
-0.9
CPT0086890003
Normal
-0.9
CPT0000890001
Normal
-0.9
CPT0015910003
Tumor
-0.9
CPT0023710001
Normal
-0.9
CPT0006730001
Normal
-0.9
CPT0065430003
Tumor
-0.9
CPT0009020003
Normal
-0.9
CPT0025880003
Tumor
-1.0
CPT0088640003
Normal
-1.0
CPT0085670003
Tumor
-1.0
CPT0079230003
Tumor
-1.0
CPT0002370001
Normal
-1.0
CPT0081600003
Tumor
-1.0
CPT0007870001
Normal
-1.1
CPT0001220008
Tumor
-1.1
CPT0065810003
Tumor
-1.1
CPT0002270011
Tumor
-1.1
CPT0078930003
Tumor
-1.1
CPT0092740003
Normal
-1.1
CPT0066430001
Normal
-1.1
CPT0078660003
Tumor
-1.1
CPT0079000001
Normal
-1.1
CPT0025290003
Tumor
-1.1
CPT0010110003
Tumor
-1.2
CPT0011240003
Tumor
-1.2
CPT0019130003
Tumor
-1.2
CPT0065450001
Normal
-1.2
CPT0092160003
Tumor
-1.2
CPT0025580004
Tumor
-1.2
CPT0000870016
Tumor
-1.2
CPT0089480003
Normal
-1.2
CPT0081990003
Tumor
-1.2
CPT0006630003
Tumor
-1.2
CPT0015730003
Tumor
-1.2
CPT0025350003
Tumor
-1.3
CPT0001180009
Tumor
-1.3
CPT0014350001
Normal
-1.3
CPT0086360003
Tumor
-1.3
CPT0025920001
Normal
-1.3
CPT0010160003
Tumor
-1.4
CPT0006440003
Tumor
-1.4
CPT0079380003
Tumor
-1.4
CPT0009080003
Normal
-1.4
CPT0092730003
Tumor
-1.4
CPT0077490003
Tumor
-1.5
CPT0078830003
Tumor
-1.5
CPT0088760003
Tumor
-1.5
CPT0019160001
Normal
-1.5
CPT0078990003
Tumor
-1.5
CPT0001540009
Tumor
-1.5
CPT0075720003
Tumor
-1.5
CPT0009060003
Tumor
-1.5
CPT0020020001
Normal
-1.5
CPT0086870003
Tumor
-1.5
CPT0088900003
Tumor
-1.6
CPT0088630003
Tumor
-1.6
CPT0014370004
Tumor
-1.6
CPT0066470004
Tumor
-1.7
CPT0001230001
Normal
-1.7
CPT0012370003
Tumor
-1.7
CPT0014450004
Tumor
-1.8
CPT0088550004
Tumor
-1.8
CPT0026410003
Tumor
-2.1
CPT0088970003
Tumor
-2.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
