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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPN2 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
150.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
250.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
235.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
228.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
225.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
222.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
220.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
218.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
215.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
214.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
212.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
209.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
204.7
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
202.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
198.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
195.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
194.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
193.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
193.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
191.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
191.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
188.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
188.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
181.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
174.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
172.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
170.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
163.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
161.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
159.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
154.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
153.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
152.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
151.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
147.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
144.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
140.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
140.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
137.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
137.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
134.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
124.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
124.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
121.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
120.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
120.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
119.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
118.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
118.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
111.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
105.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
101.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
98.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
97.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
90.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
89.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
86.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
82.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
80.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
76.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
73.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
72.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
58.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
49.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPN2 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
187.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
711.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
558.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
495.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
475.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
429.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
425.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
419.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
410.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
408.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
405.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
392.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
380.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
363.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
362.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
360.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
358.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
341.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
341.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
341.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
340.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
340.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
337.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
332.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
330.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
328.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
322.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
317.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
315.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
310.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
310.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
309.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
302.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
302.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
300.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
298.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
295.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
295.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
295.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
292.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
287.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
285.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
285.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
284.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
282.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
280.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
278.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
277.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
276.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
276.8
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
276.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
275.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
273.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
273.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
272.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
269.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
268.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
267.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
266.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
265.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
265.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
264.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
263.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
263.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
263.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
260.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
259.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
257.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
256.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
255.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
254.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
253.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
253.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
253.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
252.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
251.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
250.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
250.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
250.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
249.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
245.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
243.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
242.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
242.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
240.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
238.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
238.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
236.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
236.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
236.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
236.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
236.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
234.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
234.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
234.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
234.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
233.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
232.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
232.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
231.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
231.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
230.9
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
230.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
229.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
229.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
228.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
228.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
227.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
227.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
226.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
226.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
226.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
226.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
226.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
226.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
225.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
225.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
225.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
225.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
223.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
223.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
223.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
223.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
223.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
223.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
222.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
222.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
221.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
221.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
221.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
220.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
219.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
219.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
218.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
218.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
217.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
217.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
217.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
217.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
216.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
216.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
216.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
214.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
214.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
212.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
211.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
211.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
211.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
210.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
210.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
210.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
209.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
209.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
209.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
209.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
208.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
208.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
208.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
208.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
207.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
207.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
207.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
207.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
207.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
206.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
206.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
205.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
205.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
205.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
204.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
203.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
203.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
203.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
203.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
203.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
203.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
203.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
202.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
202.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
202.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
202.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
201.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
201.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
201.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
200.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
200.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
200.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
200.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
200.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
199.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
199.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
199.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
199.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
198.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
198.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
198.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
198.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
196.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
195.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
195.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
195.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
194.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
194.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
194.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
194.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
193.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
192.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
192.4
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
192.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
192.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
191.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
191.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
191.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
190.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
190.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
190.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
190.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
189.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
189.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
189.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
189.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
189.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
189.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
188.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
187.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
187.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
186.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
186.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
186.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
185.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
185.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
185.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
185.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
184.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
184.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
183.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
183.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
182.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
182.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
182.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
181.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
181.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
181.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
181.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
181.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
181.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
181.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
180.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
180.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
180.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
180.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
179.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
179.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
179.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
179.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
178.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
178.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
178.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
178.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
178.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
178.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
177.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
177.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
176.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
176.8
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
176.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
176.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
176.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
175.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
175.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
175.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
174.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
174.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
174.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
174.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
174.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
173.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
173.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
173.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
173.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
172.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
172.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
172.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
172.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
171.9
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
171.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
171.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
171.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
171.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
171.1
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
171.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
170.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
170.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
170.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
169.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
169.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
169.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
169.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
168.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
168.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
168.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
168.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
168.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
168.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
168.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
168.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
167.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
167.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
167.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
167.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
166.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
165.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
165.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
164.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
164.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
164.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
164.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
164.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
164.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
164.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
164.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
163.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
163.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
163.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
163.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
163.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
162.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
162.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
162.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
161.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
161.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
161.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
161.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
160.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
160.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
160.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
160.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
160.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
159.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
159.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
159.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
159.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
158.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
158.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
157.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
157.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
156.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
156.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
156.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
156.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
156.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
156.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
155.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
155.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
155.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
155.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
155.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
154.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
154.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
153.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
153.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
153.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
153.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
152.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
152.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
152.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
152.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
152.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
152.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
152.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
151.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
151.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
151.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
150.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
149.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
149.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
148.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
147.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
147.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
147.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
147.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
147.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
147.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
146.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
146.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
146.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
145.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
145.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
145.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
144.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
144.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
144.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
144.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
144.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
144.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
144.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
143.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
143.3
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
142.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
142.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
141.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
141.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
141.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
141.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
141.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
141.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
140.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
140.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
140.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
139.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
139.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
139.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
138.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
138.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
137.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
137.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
137.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
137.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
136.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
136.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
135.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
135.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
135.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
134.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
133.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
133.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
133.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
133.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
133.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
132.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
132.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
131.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
130.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
130.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
130.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
130.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
130.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
130.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
128.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
128.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
128.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
127.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
127.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
126.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
126.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
125.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
125.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
124.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
124.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
123.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
121.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
121.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
121.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
120.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
119.4
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
119.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
118.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
118.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
118.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
117.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
116.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
116.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
115.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
115.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
115.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
114.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
113.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
113.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
112.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
107.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
106.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
106.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
105.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
105.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
101.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
101.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
99.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
99.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
98.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
97.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
96.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
96.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
95.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
95.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
94.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
94.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
94.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
93.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
90.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
87.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
87.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
85.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
84.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
84.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
83.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
82.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
82.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
81.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
81.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
80.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
80.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
79.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
78.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
76.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
72.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
71.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
71.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
71.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
69.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
67.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
67.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
62.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
61.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
59.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
57.5
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
54.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
51.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
45.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
41.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
41.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
41.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPN2 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
209.4
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
493.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
492.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
477.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
468.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
400.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
397.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
380.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
375.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
337.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
316.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
315.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
314.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
293.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
289.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
288.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
282.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
281.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
275.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
273.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
264.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
264.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
253.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
253.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
252.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
246.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
231.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
227.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
225.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
220.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
217.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
216.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
216.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
214.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
212.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
208.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
205.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
203.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
202.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
199.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
199.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
197.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
191.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
188.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
187.6
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
186.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
186.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
185.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
185.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
185.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
184.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
184.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
184.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
183.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
183.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
182.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
179.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
178.8
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
178.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
177.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
176.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
174.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
173.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
172.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
171.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
170.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
166.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
165.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
164.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
162.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
161.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
161.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
161.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
159.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
157.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
156.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
155.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
155.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
154.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
151.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
150.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
149.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
148.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
148.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
146.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
144.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
141.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
137.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
133.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
132.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
132.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
130.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
127.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
125.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
125.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
122.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
119.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
111.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
109.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
76.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPN2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
193.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
691.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
510.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
497.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
470.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
408.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
396.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
393.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
392.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
383.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
376.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
375.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
372.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
370.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
360.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
328.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
326.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
326.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
323.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
320.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
310.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
309.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
309.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
308.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
307.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
306.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
302.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
297.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
292.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
288.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
288.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
287.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
287.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
287.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
283.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
280.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
278.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
275.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
271.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
268.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
266.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
264.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
262.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
262.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
261.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
257.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
257.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
256.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
256.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
254.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
249.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
247.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
246.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
246.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
244.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
244.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
242.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
242.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
240.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
238.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
238.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
237.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
236.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
233.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
233.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
232.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
231.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
231.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
230.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
230.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
229.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
228.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
228.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
227.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
227.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
226.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
226.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
226.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
223.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
222.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
222.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
221.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
221.7
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
221.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
221.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
221.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
220.9
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
220.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
219.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
217.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
217.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
215.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
214.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
214.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
213.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
213.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
212.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
211.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
206.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
206.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
206.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
205.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
204.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
203.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
202.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
202.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
202.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
200.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
200.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
200.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
199.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
199.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
199.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
198.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
198.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
197.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
197.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
197.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
196.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
196.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
195.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
194.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
194.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
193.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
192.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
191.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
191.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
190.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
190.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
190.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
189.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
189.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
188.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
188.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
187.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
187.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
186.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
186.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
186.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
185.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
184.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
184.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
184.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
183.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
183.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
182.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
181.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
180.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
180.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
179.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
179.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
178.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
178.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
178.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
178.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
177.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
177.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
176.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
176.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
175.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
175.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
174.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
173.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
173.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
173.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
172.8
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
171.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
171.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
170.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
169.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
169.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
169.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
168.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
167.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
166.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
166.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
165.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
164.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
163.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
162.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
162.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
161.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
161.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
160.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
160.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
159.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
157.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
156.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
156.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
155.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
155.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
154.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
153.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
153.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
152.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
151.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
151.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
151.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
151.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
150.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
150.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
150.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
150.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
149.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
148.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
148.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
147.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
146.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
146.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
146.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
145.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
145.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
142.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
142.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
141.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
141.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
140.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
138.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
138.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
138.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
138.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
138.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
137.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
136.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
135.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
135.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
134.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
133.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
132.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
132.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
132.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
131.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
131.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
131.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
129.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
127.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
125.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
123.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
123.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
123.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
123.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
121.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
120.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
119.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
118.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
117.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
114.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
113.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
111.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
111.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
111.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
110.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
105.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
103.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
102.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
101.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
99.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
98.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
97.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
95.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
91.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
91.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
89.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
88.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
87.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
82.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
81.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
81.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
80.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
79.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
78.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
78.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
74.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
73.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
62.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
61.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
61.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
58.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
57.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
48.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
47.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
33.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
23.6
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
1.2
CPT0012180003
Tumor
1.1
CPT0088550004
Tumor
1.0
CPT0002350011
Tumor
1.0
CPT0015730003
Tumor
0.8
CPT0025290003
Tumor
0.8
CPT0023350003
Tumor
0.7
CPT0079270003
Tumor
0.7
CPT0076330003
Tumor
0.7
CPT0014160003
Tumor
0.7
CPT0078510003
Tumor
0.6
CPT0088690003
Tumor
0.6
CPT0069160003
Tumor
0.6
CPT0092730003
Tumor
0.6
CPT0078800003
Tumor
0.5
CPT0086820003
Tumor
0.5
CPT0063630003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0025110003
Tumor
0.5
CPT0092290003
Tumor
0.5
CPT0025170003
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0089020003
Tumor
0.4
CPT0092160003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0001180009
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0025050003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0020120003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0077310003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0023360001
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0000790001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0088630003
Tumor
0.1
CPT0088710001
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0088780001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0002270011
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0001270001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0065870003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0092740003
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0081620001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0025060001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0078660003
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0012370003
Tumor
-0.1
CPT0065930003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0077500001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0071150004
Tumor
-0.2
CPT0086890003
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0088900003
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0012080003
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0063330001
Normal
-0.2
CPT0014350001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0086870003
Tumor
-0.2
CPT0081990003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0001540009
Tumor
-0.3
CPT0079300001
Normal
-0.3
CPT0079510001
Normal
-0.3
CPT0006440003
Tumor
-0.3
CPT0079000001
Normal
-0.3
CPT0010120001
Normal
-0.3
CPT0075720003
Tumor
-0.3
CPT0078530001
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0014370004
Tumor
-0.3
CPT0079430001
Normal
-0.3
CPT0066480003
Tumor
-0.3
CPT0025610001
Normal
-0.3
CPT0002370001
Normal
-0.4
CPT0001550001
Normal
-0.4
CPT0084560003
Tumor
-0.4
CPT0075170001
Normal
-0.4
CPT0014470001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0012770003
Normal
-0.5
CPT0026410003
Tumor
-0.5
CPT0000780007
Tumor
-0.6
CPT0012570003
Normal
-0.6
CPT0012090003
Normal
-0.6
CPT0018250001
Normal
-0.6
CPT0017450001
Normal
-0.6
CPT0024680001
Normal
-0.7
CPT0079180003
Tumor
-0.8
CPT0012640003
Normal
-0.8
CPT0009060003
Tumor
-0.8
CPT0012900004
Tumor
-1.0
CPT0011240003
Tumor
-1.1
CPT0009020003
Normal
-1.2
CPT0012920003
Normal
-1.5
CPT0009080003
Normal
-1.6
CPT0017410003
Tumor
-2.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
