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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
159.1
nTPM
GTEx:
159.1
nTPM
FANTOM5:
57.4
Scaled Tags Per Million
Pig:
188.2
nTPM
Mouse:
154.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
159.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 159.1
Samples: 105
Max nTPM: 262.5
Min nTPM: 72.2
Std nTPM: 38.7
Median nTPM:
355_1
70 years, female
262.5
243_1
75 years, male
248.6
246_1
77 years, male
235.7
32_1
67 years, male
232.0
265_1
87 years, male
229.2
153_1
70 years, female
226.6
172_1
72 years, female
225.5
315_1
62 years, female
219.1
415_1
77 years, female
219.0
349_1
83 years, male
218.8
348_1
84 years, male
218.0
254_1
77 years, female
217.5
379_1
60 years, male
210.6
405_1
91 years, male
208.0
162_1
79 years, female
205.3
217_1
76 years, male
199.9
318_1
68 years, male
199.9
389_1
86 years, female
199.3
109_1
81 years, female
196.6
414_1
84 years, female
196.4
377_1
82 years, female
196.3
468_1
89 years, male
193.3
6_1
73 years, female
190.2
229_1
69 years, female
189.9
266_1
85 years, male
189.6
491_1
89 years, female
189.2
335_1
73 years, female
185.3
81_1
67 years, male
182.9
404_1
82 years, female
182.6
142_1
61 years, female
182.5
286_1
68 years, female
181.1
288_1
66 years, female
177.0
319_1
81 years, male
174.8
354_1
81 years, female
174.0
149_1
88 years, male
173.1
251_1
78 years, male
173.1
466_1
57 years, female
172.4
526_1
61 years, male
171.9
291_1
76 years, male
171.2
503_1
68 years, male
171.0
447_1
81 years, male
166.6
99_1
64 years, male
165.5
314_1
67 years, male
165.3
375_1
74 years, female
164.6
386_1
76 years, male
163.2
356_1
87 years, female
162.5
115_1
83 years, male
158.7
350_1
84 years, female
158.2
120_1
70 years, female
158.0
351_1
91 years, male
153.4
139_1
64 years, female
153.3
376_1
75 years, female
153.3
4_1
88 years, female
153.2
396_1
62 years, male
152.7
295_1
61 years, female
152.5
452_1
88 years, female
151.9
17_1
71 years, male
151.6
177_1
74 years, male
151.3
413_1
59 years, female
148.9
394_1
75 years, female
148.6
425_1
59 years, female
147.9
163_1
78 years, male
146.1
126_1
63 years, male
144.3
384_1
83 years, male
144.0
518_1
75 years, female
143.9
18_1
88 years, male
143.8
316_1
62 years, male
142.3
43_1
64 years, female
142.0
9_1
66 years, female
140.6
320_1
89 years, female
140.0
490_1
67 years, female
136.9
292_1
71 years, male
136.4
145_1
84 years, male
136.0
117_1
61 years, male
135.7
480_1
63 years, male
135.7
311_1
78 years, male
133.7
353_1
82 years, female
133.6
406_1
79 years, male
132.6
352_1
62 years, male
132.0
322_1
76 years, male
131.5
237_1
82 years, male
130.7
35_1
74 years, female
129.2
347_1
72 years, male
128.1
173_1
67 years, male
127.2
317_1
60 years, male
124.6
218_1
71 years, female
123.2
324_1
76 years, male
122.3
517_1
88 years, male
120.0
321_1
62 years, female
119.8
42_1
85 years, male
119.4
41_1
94 years, female
118.3
308_1
70 years, female
116.3
119_1
70 years, female
115.7
189_1
76 years, male
114.9
264_1
73 years, female
112.3
307_1
66 years, female
111.5
499_1
55 years, female
111.2
501_1
88 years, male
107.3
313_1
79 years, female
105.8
89_1
63 years, male
104.2
506_1
65 years, male
100.0
137_1
83 years, male
95.8
2_1
77 years, female
92.3
293_1
68 years, female
75.9
495_1
57 years, female
72.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
