HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:9.4 nTPM
HPA Brain:22.2 nTPM
GTEx:9.4 nTPM
FANTOM5:41.8 Scaled Tags Per Million
Pig:34.6 nTPM
Mouse:44.1 nTPM
Allen mouse:7.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 22.2
Sample id Sample description nTPM
Hippocampus
nTPM: 17.9
1898 Male, age 80, left hemisphere 29.2
2621 Female, age 67, right hemisphere 20.0
1855 Male, age 76, left hemisphere 18.4
2148 Female, age 91, left hemisphere 17.6
1911 Female, age 85, right hemisphere 13.4
2529 Female, age 94, left hemisphere 8.9
Dentate gyrus
nTPM: 20.9
1927 Female, age 91, both hemispheres 32.9
2530 Female, age 94, left hemisphere 22.8
2010 Male, age 76, both hemispheres 20.5
2246 Female, age 85, both hemispheres 17.3
2528 Male, age 74, both hemispheres 17.0
2531 Female, age 67, both hemispheres 14.9
Entorhinal gyrus
nTPM: 16.2
2613 Female, age 94, left hemisphere 23.8
1938 Female, age 85, left hemisphere 19.7
1787 Male, age 76, left hemisphere 16.4
2764 Male, age 80, right hemisphere 15.2
2686 Male, age 75, right hemisphere 12.5
2117 Female, age 91, right hemisphere 9.1
Hippocampus, CA1
nTPM: 22.0
2749 Male, age 80, left hemisphere 36.7
1873 Female, age 85, both hemispheres 25.7
2527 Male, age 74, both hemispheres 16.9
2045 Male, age 76, both hemispheres 16.6
2082 Female, age 91, right hemisphere 14.2
Hippocampus, CA2
nTPM: 20.2
1892 Male, age 76, both hemispheres 30.7
1963 Male, age 80, left hemisphere 27.7
2249 Male, age 74, both hemispheres 19.6
2437 Female, age 94, left hemisphere 16.6
1940 Female, age 85, left hemisphere 13.7
2113 Female, age 91, right hemisphere 13.2
Hippocampus, CA3
nTPM: 20.9
2436 Male, age 74, both hemispheres 26.3
2620 Female, age 94, left hemisphere 24.0
1867 Male, age 76, both hemispheres 22.5
2137 Male, age 80, left hemisphere 20.4
2861 Female, age 67, both hemispheres 17.0
1891 Female, age 85, both hemispheres 15.2
Parahippocampal cortex
nTPM: 17.5
2250 Female, age 67, right hemisphere 23.0
1990 Female, age 91, right hemisphere 21.4
2693 Female, age 94, both hemispheres 21.0
1850 Male, age 80, both hemispheres 20.6
1933 Female, age 85, both hemispheres 18.5
2245 Female, age 91, both hemispheres 18.5
2532 Female, age 72, left hemisphere 13.9
2622 Female, age 67, right hemisphere 13.6
2692 Male, age 74, both hemispheres 13.4
2018 Male, age 76, both hemispheres 11.4
Perirhinal gyrus
nTPM: 22.2
1847 Female, age 91, left hemisphere 29.2
2521 Female, age 94, right hemisphere 27.3
1841 Female, age 85, right hemisphere 20.7
1794 Male, age 80, right hemisphere 19.6
2848 Male, age 76, right hemisphere 14.0
Subiculum
nTPM: 14.1
1977 Female, age 85, both hemispheres 19.0
1901 Male, age 80, both hemispheres 15.8
2438 Female, age 94, left hemisphere 13.8
2619 Male, age 74, both hemispheres 12.8
2729 Female, age 91, right hemisphere 12.1
2042 Male, age 76, both hemispheres 11.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 9.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.4
Samples: 197

Max nTPM: 38.8
Min nTPM: 0.9
Std nTPM: 6.3
Median nTPM: 8.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 38.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 27.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 25.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 24.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 24.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 23.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 23.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 23.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 23.0
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 22.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 21.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 41.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.8
FF:10169-103B7 60 years, female 65.4
FF:10153-102I9 76 years, female 18.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 34.6
Pig sample Sample description nTPM
Subiculum
nTPM: 27.7
Samples: 4

Max nTPM: 31.3
Min nTPM: 23.8
Sample A Female 31.3
Sample B Female 27.4
Sample C Male 28.4
Sample D Male 23.8
Dorsal hippocampus
nTPM: 34.6
Samples: 4

Max nTPM: 42.4
Min nTPM: 25.7
Sample A Female 39.3
Sample B Female 42.4
Sample C Male 31.1
Sample D Male 25.7
Entorhinal cortex
nTPM: 27.4
Samples: 4

Max nTPM: 33.0
Min nTPM: 25.3
Sample A Female 25.7
Sample B Female 33.0
Sample C Male 25.7
Sample D Male 25.3
Ventral hippocampus
nTPM: 31.3
Samples: 4

Max nTPM: 36.1
Min nTPM: 26.7
Sample A Female 31.8
Sample B Female 26.7
Sample C Male 30.4
Sample D Male 36.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 44.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.3
Samples: 4

Max nTPM: 44.1
Min nTPM: 37.6
Sample A Male 39.4
Sample B Male 40.0
Sample C Female 37.6
Sample D Female 44.1
Hippocampal formation
nTPM: 44.1
Samples: 4

Max nTPM: 49.6
Min nTPM: 41.3
Sample A Male 42.1
Sample B Male 43.5
Sample C Female 49.6
Sample D Female 41.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.3
69059903 Antisense, RP_050317_04_E02, Mouse strain C57BL/6J (56 days, male) 7.3

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