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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPCS2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
71.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
248.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
187.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
162.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
161.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
157.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
153.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
144.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
140.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
138.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
135.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
135.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
134.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
126.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
122.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
108.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
106.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
105.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
101.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
100.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
98.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
98.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
97.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
92.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
87.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
87.4
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
86.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
81.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
81.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
80.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
78.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
77.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
74.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
71.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
65.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
62.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
61.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
60.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
54.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
54.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
49.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
38.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
37.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
27.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
22.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
22.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
18.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
18.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
18.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
15.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
12.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
11.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
10.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
9.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
8.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
8.2
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
8.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
8.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
7.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
6.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
5.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
5.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
4.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
1.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPCS2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
116.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
285.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
241.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
222.4
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
217.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
211.6
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
211.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
207.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
200.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
194.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
194.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
190.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
189.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
188.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
184.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
183.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
182.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
182.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
180.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
180.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
178.6
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
177.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
176.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
175.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
175.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
174.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
173.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
173.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
172.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
167.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
167.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
166.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
165.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
165.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
165.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
164.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
164.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
162.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
161.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
161.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
161.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
161.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
160.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
160.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
160.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
160.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
160.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
160.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
159.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
159.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
159.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
159.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
159.0
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
158.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
158.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
157.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
157.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
156.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
156.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
155.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
155.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
155.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
154.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
154.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
154.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
154.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
154.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
154.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
153.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
153.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
152.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
152.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
151.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
151.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
151.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
151.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
151.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
151.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
150.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
150.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
150.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
150.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
150.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
150.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
149.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
149.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
149.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
149.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
149.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
149.3
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
148.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
147.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
147.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
147.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
146.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
146.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
146.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
146.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
146.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
146.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
145.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
145.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
144.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
144.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
144.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
144.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
144.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
144.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
144.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
143.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
143.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
143.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
143.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
143.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
142.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
142.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
142.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
142.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
142.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
142.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
142.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
142.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
142.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
141.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
141.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
141.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
141.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
141.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
141.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
141.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
140.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
140.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
140.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
140.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
140.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
140.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
140.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
139.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
139.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
139.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
139.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
139.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
139.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
138.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
138.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
138.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
138.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
137.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
136.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
136.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
136.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
136.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
135.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
135.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
135.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
135.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
135.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
135.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
135.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
135.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
135.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
134.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
134.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
134.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
134.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
134.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
133.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
133.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
133.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
133.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
133.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
133.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
132.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
132.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
132.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
132.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
132.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
132.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
132.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
131.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
131.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
131.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
131.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
130.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
130.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
130.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
130.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
130.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
130.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
130.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
130.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
130.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
129.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
129.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
129.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
129.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
129.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
129.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
129.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
129.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
128.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
128.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
128.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
128.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
128.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
128.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
127.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
127.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
127.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
127.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
127.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
126.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
126.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
126.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
126.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
126.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
125.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
125.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
125.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
125.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
125.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
124.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
124.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
124.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
124.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
124.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
124.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
124.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
123.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
123.1
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
122.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
122.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
122.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
122.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
122.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
122.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
122.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
122.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
122.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
122.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
121.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
121.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
121.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
121.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
121.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
121.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
121.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
121.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
120.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
120.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
120.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
120.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
120.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
120.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
120.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
119.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
119.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
119.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
119.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
119.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
119.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
119.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
119.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
118.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
118.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
118.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
118.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
118.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
118.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
117.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
117.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
117.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
117.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
117.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
117.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
116.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
116.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
116.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
116.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
116.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
116.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
116.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
116.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
116.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
116.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
116.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
115.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
115.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
115.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
115.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
115.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
115.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
115.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
115.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
114.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
114.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
114.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
114.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
114.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
114.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
114.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
113.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
113.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
112.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
112.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
112.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
112.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
111.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
111.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
111.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
111.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
110.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
110.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
110.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
110.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
110.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
110.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
110.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
109.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
109.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
109.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
108.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
108.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
108.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
108.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
108.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
107.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
107.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
107.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
107.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
107.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
107.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
106.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
106.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
106.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
106.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
106.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
106.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
105.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
105.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
105.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
105.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
104.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
104.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
104.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
104.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
104.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
104.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
104.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
103.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
103.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
103.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
103.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
103.6
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
103.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
103.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
103.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
103.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
102.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
102.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
102.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
102.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
102.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
101.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
101.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
101.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
101.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
101.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
101.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
100.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
100.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
100.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
99.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
98.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
98.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
98.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
98.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
98.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
98.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
97.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
97.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
97.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
97.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
97.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
97.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
95.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
95.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
95.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
95.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
94.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
94.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
94.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
94.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
93.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
93.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
93.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
93.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
93.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
92.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
92.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
91.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
91.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
91.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
91.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
91.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
90.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
90.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
90.7
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
90.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
90.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
90.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
89.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
89.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
89.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
88.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
88.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
88.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
87.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
87.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
87.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
86.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
86.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
85.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
85.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
85.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
85.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
85.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
84.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
84.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
84.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
83.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
83.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
83.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
83.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
82.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
82.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
81.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
80.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
80.6
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
80.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
79.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
78.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
77.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
77.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
77.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
76.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
76.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
75.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
74.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
74.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
73.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
72.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
72.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
72.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
72.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
71.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
71.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
70.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
69.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
67.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
67.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
66.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
66.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
65.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
65.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
65.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
65.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
64.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
63.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
62.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
62.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
60.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
59.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
59.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
59.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
58.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
56.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
56.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
56.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
54.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
54.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
53.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
53.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
53.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
52.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
52.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
51.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
51.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
50.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
49.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
49.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
49.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
49.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
48.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
48.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
48.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
47.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
47.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
46.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
46.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
45.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
44.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
43.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
43.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
41.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
39.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
39.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
38.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
37.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
35.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
34.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
34.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
33.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
33.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
32.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
31.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
28.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
28.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
25.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
19.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
17.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPCS2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
129.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
211.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
205.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
196.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
187.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
180.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
180.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
179.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
176.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
172.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
172.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
171.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
170.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
169.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
166.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
166.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
165.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
160.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
158.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
157.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
156.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
156.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
155.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
155.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
154.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
154.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
154.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
153.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
152.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
146.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
146.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
144.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
143.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
141.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
140.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
136.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
136.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
135.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
135.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
134.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
132.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
132.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
132.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
131.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
130.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
130.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
129.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
129.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
128.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
128.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
127.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
127.7
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
127.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
127.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
126.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
126.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
125.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
125.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
122.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
122.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
121.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
119.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
118.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
117.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
117.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
116.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
113.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
112.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
111.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
111.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
110.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
110.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
109.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
108.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
108.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
107.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
107.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
106.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
106.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
104.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
103.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
101.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
100.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
99.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
97.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
97.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
97.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
97.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
95.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
92.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
92.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
91.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
89.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
82.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
80.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
80.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
77.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
72.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
71.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPCS2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
63.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
237.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
236.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
214.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
155.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
151.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
143.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
136.6
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
135.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
133.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
131.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
126.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
126.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
123.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
121.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
119.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
119.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
118.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
117.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
116.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
115.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
115.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
115.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
115.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
114.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
114.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
114.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
114.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
113.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
113.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
113.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
113.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
112.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
111.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
110.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
109.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
109.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
108.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
108.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
107.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
106.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
106.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
105.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
105.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
105.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
105.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
105.0
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
104.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
103.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
102.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
102.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
102.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
100.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
100.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
99.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
99.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
98.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
97.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
97.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
97.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
97.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
97.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
96.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
96.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
96.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
96.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
95.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
94.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
94.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
93.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
92.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
91.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
91.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
91.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
91.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
91.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
90.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
90.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
89.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
89.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
89.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
88.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
87.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
87.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
86.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
85.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
85.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
85.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
85.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
84.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
84.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
83.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
83.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
83.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
82.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
82.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
81.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
81.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
81.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
81.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
81.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
80.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
80.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
80.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
80.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
80.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
80.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
80.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
79.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
78.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
77.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
77.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
77.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
76.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
76.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
75.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
75.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
75.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
74.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
74.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
73.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
73.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
73.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
72.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
72.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
72.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
72.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
71.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
71.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
71.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
71.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
71.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
71.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
70.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
70.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
69.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
69.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
69.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
67.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
67.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
67.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
67.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
67.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
67.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
66.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
66.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
65.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
65.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
65.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
63.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
62.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
62.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
62.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
61.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
60.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
60.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
60.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
59.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
59.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
59.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
58.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
58.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
58.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
58.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
58.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
58.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
58.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
56.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
56.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
56.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
55.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
55.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
54.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
54.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
53.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
53.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
52.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
52.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
52.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
52.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
51.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
51.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
50.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
50.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
47.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
47.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
46.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
45.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
44.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
44.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
43.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
43.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
40.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
39.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
39.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
38.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
37.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
36.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
36.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
36.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
35.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
34.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
33.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
32.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
31.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
29.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
28.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
26.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
26.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
25.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
23.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
22.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
22.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
21.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
20.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
20.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
20.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
18.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
18.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
17.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
16.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
15.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
15.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
14.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
14.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.4
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
13.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
12.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
12.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
12.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
12.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
11.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
11.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
11.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
11.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
10.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
10.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
10.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
9.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
8.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
8.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
8.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
7.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
7.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
7.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
7.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
7.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
6.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
5.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
5.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
5.6
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
5.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
5.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
5.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
4.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
4.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
4.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
3.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
3.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
3.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
3.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
3.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
2.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
2.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
1.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
1.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
1.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
1.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
2.0
CPT0088550004
Tumor
1.5
CPT0002350011
Tumor
0.9
CPT0001180009
Tumor
0.9
CPT0001340003
Tumor
0.9
CPT0078660003
Tumor
0.7
CPT0023350003
Tumor
0.7
CPT0078800003
Tumor
0.7
CPT0092160003
Tumor
0.6
CPT0014160003
Tumor
0.6
CPT0007320003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0092290003
Tumor
0.4
CPT0087040003
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0086360003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0025290003
Tumor
0.3
CPT0001260009
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0069190001
Normal
0.3
CPT0006900003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0088780001
Normal
0.3
CPT0086820003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0092740003
Normal
0.3
CPT0079430001
Normal
0.3
CPT0088710001
Normal
0.3
CPT0024670003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0015730003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0001230001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0088500001
Normal
0.2
CPT0081600003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0086830003
Normal
0.2
CPT0025230003
Tumor
0.2
CPT0006530001
Normal
0.2
CPT0088690003
Tumor
0.2
CPT0069000003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0089480003
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0065430003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0002270011
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0001350001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0000640003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0078830003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0006950001
Normal
0.0
CPT0015810003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0026420001
Normal
0.0
CPT0023710001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0087050003
Normal
0.0
CPT0079000001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0088970003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0001510001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0079230003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0012370003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0006630003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0079480003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0069010001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0088760003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0000870016
Tumor
-0.2
CPT0063330001
Normal
-0.2
CPT0077110003
Tumor
-0.2
CPT0081620001
Normal
-0.2
CPT0020130001
Normal
-0.2
CPT0025110003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0065750003
Tumor
-0.2
CPT0010120001
Normal
-0.2
CPT0086950003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0088900003
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0019990003
Tumor
-0.3
CPT0010170001
Normal
-0.3
CPT0009000003
Tumor
-0.3
CPT0079300001
Normal
-0.3
CPT0001540009
Tumor
-0.3
CPT0077140001
Normal
-0.3
CPT0077500001
Normal
-0.3
CPT0085670003
Tumor
-0.3
CPT0077320001
Normal
-0.3
CPT0010160003
Tumor
-0.3
CPT0071150004
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0006440003
Tumor
-0.4
CPT0081990003
Tumor
-0.4
CPT0021240003
Tumor
-0.4
CPT0001500009
Tumor
-0.4
CPT0082010001
Normal
-0.4
CPT0084560003
Tumor
-0.4
CPT0025060001
Normal
-0.4
CPT0012080003
Tumor
-0.4
CPT0075570001
Normal
-0.5
CPT0075720003
Tumor
-0.5
CPT0025610001
Normal
-0.5
CPT0014470001
Normal
-0.5
CPT0017450001
Normal
-0.5
CPT0026410003
Tumor
-0.5
CPT0018250001
Normal
-0.5
CPT0012640003
Normal
-0.6
CPT0076350001
Normal
-0.6
CPT0079180003
Tumor
-0.6
CPT0012090003
Normal
-0.6
CPT0012770003
Normal
-0.6
CPT0012570003
Normal
-0.7
CPT0077490003
Tumor
-0.7
CPT0009060003
Tumor
-0.7
CPT0000780007
Tumor
-0.7
CPT0065930003
Tumor
-0.8
CPT0009020003
Normal
-0.8
CPT0024680001
Normal
-0.9
CPT0012920003
Normal
-1.1
CPT0009080003
Normal
-1.3
CPT0011240003
Tumor
-1.5
CPT0012900004
Tumor
-1.8
CPT0017410003
Tumor
-2.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
