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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ESYT2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
51.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
50.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
44.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
40.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
38.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
32.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
30.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
29.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
29.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
28.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
27.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
27.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
26.9
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
26.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
26.3
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
25.6
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
24.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
24.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
23.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
23.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
23.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
22.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
22.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
22.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
21.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
21.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
20.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
20.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
20.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
19.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
19.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
19.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
19.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
19.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
19.0
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
18.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
18.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
18.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
18.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
18.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
17.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
17.7
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
17.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
17.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
17.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
17.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
17.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
16.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
16.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
16.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
16.7
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
16.7
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
16.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
16.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
16.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
16.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
16.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
16.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
15.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
15.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
15.8
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
15.7
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
15.6
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
15.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
15.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
15.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
15.2
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
15.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
15.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
15.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
15.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
15.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
14.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
14.7
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
14.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
14.4
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
14.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
14.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
14.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
14.1
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
14.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
14.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
13.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
13.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
13.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
13.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
13.4
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
13.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
13.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
13.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
13.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
13.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
13.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
12.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
12.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
12.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
12.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
12.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
12.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
12.6
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
12.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
12.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
12.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
12.4
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
12.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
12.3
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
12.3
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
12.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
12.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
12.3
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
12.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
12.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
11.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
11.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
11.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
11.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
11.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
11.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
11.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
11.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
11.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
11.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
11.3
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
11.3
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
11.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
11.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
11.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
11.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
11.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
11.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
11.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
11.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
11.0
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
10.9
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
10.9
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
10.9
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
10.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
10.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
10.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
10.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
10.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
10.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
10.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
10.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
10.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
10.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
10.3
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
10.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
10.2
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
10.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
10.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
10.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
10.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
10.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
10.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
10.0
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
9.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
9.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
9.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
9.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
9.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
9.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
9.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
9.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
9.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
9.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
9.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
9.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
9.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
9.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
9.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
9.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
9.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
9.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
9.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
9.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
9.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
9.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
9.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
9.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
9.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
9.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
9.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
9.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
9.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
9.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
9.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
9.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
8.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
8.9
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
8.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
8.7
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
8.7
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
8.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
8.5
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
8.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
8.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
8.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
8.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
8.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
8.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
8.3
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
8.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
8.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
8.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
7.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
7.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
7.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
7.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
7.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
7.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
7.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
7.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
7.7
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
7.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
7.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
7.5
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
7.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
7.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
7.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
7.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
7.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
7.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
7.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
7.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
7.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
7.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
7.2
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
7.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
7.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
7.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
7.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
7.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
7.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
7.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
6.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
6.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
6.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
6.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
6.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
6.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
6.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
6.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
6.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.6
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
6.6
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
6.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
6.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.5
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
6.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
6.3
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
6.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
6.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
6.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
6.1
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
6.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
6.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
6.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
6.0
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
6.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
6.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
6.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
5.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
5.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
5.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
5.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
5.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
5.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
5.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
5.7
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
5.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
5.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
5.6
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
5.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.4
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
5.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
5.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.2
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
5.2
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5.0
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
4.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
4.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.8
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
4.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
4.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
4.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
4.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
4.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
4.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
4.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
4.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.2
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
4.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
4.1
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
4.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
4.1
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
4.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
4.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
4.0
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
3.9
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
3.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
3.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
3.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
3.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
3.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
3.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
3.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
3.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.3
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.2
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
3.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
2.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.4
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.1
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
1.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ESYT2 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.6
Number of samples
231
Samples
Sample
Description
TPM
DO45305
0 years, male, NA, stage:4, alive, 300 days
51.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
41.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
40.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
35.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
31.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
31.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
30.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
29.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
26.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
24.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
24.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
23.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
23.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
23.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
23.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
22.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
22.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
21.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
21.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
21.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
21.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
20.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
20.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
19.8
DO45205
0 years, female, NA, stage:2, dead, 90 days
19.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
19.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
19.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
18.7
DO45289
0 years, female, NA, stage:3, alive, 360 days
18.6
DO45177
0 years, female, NA, stage:3, alive, 1260 days
17.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
17.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
17.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
17.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
16.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
16.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
16.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
16.5
DO50778
0 years, male, NA, stage:4, alive, 630 days
16.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
16.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
16.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
16.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
16.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
15.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
15.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
15.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
15.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
15.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
15.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
15.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
15.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
15.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
14.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
14.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
14.6
DO50809
0 years, male, NA, stage:3, dead, 720 days
14.6
DO50859
0 years, male, NA, stage:2, alive, 180 days
14.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
14.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
14.2
DO45103
0 years, male, NA, stage:3, alive, 450 days
14.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
14.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
14.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
14.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
13.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
13.8
DO50832
0 years, male, NA, stage:3, alive, 90 days
13.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
13.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
13.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
13.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
13.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
13.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
13.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
13.2
DO45145
0 years, male, NA, stage:3, dead, 60 days
13.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
13.2
DO23548
0 years, female, NA, stage:1, alive, 840 days
13.2
DO45207
0 years, male, NA, stage:1, alive, 1050 days
13.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
13.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
13.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
13.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
12.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
12.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
12.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
12.8
DO45096
0 years, male, NA, stage:2, dead, 1290 days
12.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
12.7
DO48712
0 years, male, NA, stage:2, alive, 810 days
12.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
12.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
12.6
DO23510
0 years, female, NA, stage:2, alive, 870 days
12.6
DO45263
0 years, male, NA, stage:3, dead, 270 days
12.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
12.6
DO50774
0 years, female, NA, stage:2, alive, 720 days
12.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
12.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
12.4
DO45235
0 years, female, NA, stage:1, alive, 900 days
12.3
DO45141
0 years, male, NA, stage:2, alive, 1320 days
12.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
12.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
12.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
12.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
12.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
12.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
12.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
12.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
12.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
12.0
DO45273
0 years, male, NA, stage:2, alive, 480 days
12.0
DO23541
0 years, male, NA, stage:2, alive, 930 days
11.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
11.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
11.9
DO50787
0 years, male, NA, stage:3, alive, 480 days
11.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
11.9
DO45197
0 years, male, NA, stage:2, alive, 1170 days
11.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
11.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
11.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
11.8
DO45243
0 years, female, NA, stage:3, alive, 930 days
11.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
11.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
11.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
11.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
11.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
11.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
11.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
11.1
DO45239
0 years, male, NA, stage:2, alive, 870 days
11.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
11.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
10.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
10.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
10.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
10.8
DO45111
0 years, male, NA, stage:2, alive, 1590 days
10.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
10.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
10.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
10.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
10.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
10.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
10.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
10.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
10.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
10.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
10.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
10.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
10.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
10.3
DO50785
0 years, male, NA, stage:4, dead, 90 days
10.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
10.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
10.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
10.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
9.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
9.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
9.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
9.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
9.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
9.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
9.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
9.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
9.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
9.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
9.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
9.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
9.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
9.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
9.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
9.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
8.9
DO50806
0 years, male, NA, stage:4, alive, 540 days
8.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
8.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
8.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
8.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
8.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
8.8
DO50789
0 years, female, NA, stage:2, alive, 570 days
8.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
8.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
8.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
8.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
8.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
8.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
8.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
8.3
DO227801
0 years, female, NA, stage:1, alive, 660 days
8.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
8.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
7.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
7.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
7.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
7.8
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
7.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
7.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
7.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
7.4
DO48760
0 years, female, NA, stage:2, alive, 690 days
7.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
7.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
7.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
7.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
7.3
DO48741
0 years, male, NA, stage:3, alive, 240 days
7.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
7.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
7.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
7.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
7.1
DO45143
0 years, male, NA, stage:3, alive, 1290 days
7.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
7.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
7.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
7.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
6.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
6.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
6.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
6.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
6.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
6.4
DO50805
0 years, male, NA, stage:2, alive, 690 days
6.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
6.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
6.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
5.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
5.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
5.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
5.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
5.5
DO50814
0 years, male, NA, stage:3, alive, 420 days
5.4
DO48715
0 years, female, NA, stage:2, dead, 690 days
5.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
4.9
DO48674
0 years, male, NA, stage:2, alive, 1260 days
4.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
4.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
4.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
4.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
3.5
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
425
Tumor
0.8
445
Tumor
0.7
785
Tumor
0.6
911
Tumor
0.5
1027
Tumor
0.5
481
Tumor
0.4
491
Tumor
0.4
192
Normal
0.4
171
Tumor
0.4
257
Tumor
0.4
483
Tumor
0.4
311
Tumor
0.4
125
Tumor
0.4
616
Normal
0.3
375
Tumor
0.3
1032
Normal
0.3
958
Normal
0.3
863
Tumor
0.3
444
Normal
0.3
915
Tumor
0.3
917
Tumor
0.3
484
Normal
0.3
813
Tumor
0.3
648
Normal
0.3
146
Normal
0.3
878
Normal
0.3
342
Normal
0.3
387
Tumor
0.3
448
Normal
0.2
123
Tumor
0.2
954
Normal
0.2
976
Normal
0.2
572
Normal
0.2
261
Tumor
0.2
394
Normal
0.2
466
Normal
0.2
964
Normal
0.2
313
Tumor
0.2
388
Normal
0.2
222
Normal
0.2
384
Normal
0.2
132
Normal
0.2
527
Tumor
0.2
922
Normal
0.2
498
Normal
0.2
882
Normal
0.2
574
Normal
0.2
723
Tumor
0.2
916
Normal
0.2
172
Normal
0.2
142
Normal
0.2
786
Normal
0.2
698
Normal
0.2
464
Normal
0.2
741
Tumor
0.2
514
Normal
0.2
492
Normal
0.2
412
Normal
0.2
664
Normal
0.2
1046
Normal
0.2
635
Tumor
0.2
328
Normal
0.2
462
Normal
0.2
436
Normal
0.2
138
Normal
0.2
963
Tumor
0.2
977
Tumor
0.2
742
Normal
0.2
1013
Tumor
0.2
478
Normal
0.2
114
Normal
0.2
148
Normal
0.2
211
Tumor
0.2
126
Normal
0.2
124
Normal
0.2
697
Tumor
0.2
864
Normal
0.2
636
Normal
0.1
756
Normal
0.1
128
Normal
0.1
1014
Normal
0.1
314
Normal
0.1
354
Normal
0.1
361
Tumor
0.1
162
Normal
0.1
926
Normal
0.1
432
Normal
0.1
524
Normal
0.1
738
Normal
0.1
568
Normal
0.1
392
Normal
0.1
618
Normal
0.1
212
Normal
0.1
868
Normal
0.1
746
Normal
0.1
513
Tumor
0.1
111
Normal
0.1
472
Normal
0.1
516
Normal
0.1
185
Tumor
0.1
558
Normal
0.1
641
Tumor
0.1
1022
Normal
0.1
494
Normal
0.1
414
Normal
0.1
356
Normal
0.1
777
Tumor
0.1
196
Normal
0.1
628
Normal
0.1
488
Normal
0.1
268
Normal
0.1
362
Normal
0.1
136
Normal
0.1
564
Normal
0.1
546
Normal
0.1
944
Normal
0.1
858
Normal
0.1
924
Normal
0.1
434
Normal
0.1
232
Normal
0.1
422
Normal
0.1
364
Normal
0.1
186
Normal
0.1
446
Normal
0.1
874
Normal
0.1
396
Normal
0.1
1042
Normal
0.1
881
Tumor
0.1
188
Normal
0.1
982
Normal
0.1
536
Normal
0.1
1044
Normal
0.1
563
Tumor
0.1
137
Tumor
0.1
366
Normal
0.1
497
Tumor
0.1
435
Tumor
0.1
365
Tumor
0.1
647
Tumor
0.1
482
Normal
0.1
912
Normal
0.1
862
Normal
0.1
956
Normal
0.1
642
Normal
0.1
672
Normal
0.1
298
Normal
0.1
728
Normal
0.1
493
Tumor
0.1
224
Normal
0.1
968
Normal
0.1
938
Normal
0.1
744
Normal
0.1
376
Normal
0.1
918
Normal
0.1
284
Normal
0.1
852
Normal
0.1
416
Normal
0.1
722
Normal
0.1
386
Normal
0.1
424
Normal
0.1
428
Normal
0.1
1016
Normal
0.1
666
Normal
0.1
452
Normal
0.1
312
Normal
0.1
975
Tumor
0.1
228
Normal
0.1
421
Tumor
0.1
456
Normal
0.1
474
Normal
0.1
866
Normal
0.1
818
Normal
0.0
426
Normal
0.0
867
Tumor
0.0
214
Normal
0.0
272
Normal
0.0
468
Normal
0.0
358
Normal
0.0
662
Normal
0.0
526
Normal
0.0
571
Tumor
0.0
231
Tumor
0.0
327
Tumor
0.0
914
Normal
0.0
686
Normal
0.0
884
Normal
0.0
534
Normal
0.0
1045
Tumor
0.0
816
Normal
0.0
278
Normal
0.0
857
Tumor
0.0
423
Tumor
0.0
415
Tumor
0.0
966
Normal
0.0
745
Tumor
0.0
258
Normal
0.0
344
Normal
0.0
984
Normal
0.0
332
Normal
0.0
355
Tumor
0.0
696
Normal
0.0
1028
Normal
0.0
824
Normal
0.0
721
Tumor
0.0
518
Normal
0.0
528
Normal
0.0
352
Normal
0.0
554
Normal
0.0
737
Tumor
0.0
538
Normal
0.0
213
Tumor
0.0
383
Tumor
0.0
433
Tumor
0.0
716
Normal
0.0
814
Normal
0.0
978
Normal
0.0
395
Tumor
0.0
443
Tumor
0.0
277
Tumor
-0.1
913
Tumor
-0.1
221
Tumor
-0.1
943
Tumor
-0.1
713
Tumor
-0.1
861
Tumor
-0.1
368
Normal
-0.1
1041
Tumor
-0.1
851
Tumor
-0.1
271
Tumor
-0.1
455
Tumor
-0.1
981
Tumor
-0.1
147
Tumor
-0.1
187
Tumor
-0.1
1026
Normal
-0.1
923
Tumor
-0.1
714
Normal
-0.1
145
Tumor
-0.1
778
Normal
-0.1
685
Tumor
-0.1
451
Tumor
-0.1
161
Tumor
-0.1
471
Tumor
-0.1
218
Normal
-0.1
262
Normal
-0.1
297
Tumor
-0.1
724
Normal
-0.1
227
Tumor
-0.1
463
Tumor
-0.1
873
Tumor
-0.1
447
Tumor
-0.1
135
Tumor
-0.1
223
Tumor
-0.1
283
Tumor
-0.1
755
Tumor
-0.1
217
Tumor
-0.1
341
Tumor
-0.1
286
Normal
-0.1
191
Tumor
-0.1
1015
Tumor
-0.1
665
Tumor
-0.1
955
Tumor
-0.1
411
Tumor
-0.2
523
Tumor
-0.2
573
Tumor
-0.2
351
Tumor
-0.2
952
Normal
-0.2
671
Tumor
-0.2
883
Tumor
-0.2
715
Tumor
-0.2
343
Tumor
-0.2
465
Tumor
-0.2
1021
Tumor
-0.2
385
Tumor
-0.2
195
Tumor
-0.2
557
Tumor
-0.2
141
Tumor
-0.2
357
Tumor
-0.2
461
Tumor
-0.2
567
Tumor
-0.2
353
Tumor
-0.2
727
Tumor
-0.2
467
Tumor
-0.2
363
Tumor
-0.2
921
Tumor
-0.2
487
Tumor
-0.2
427
Tumor
-0.2
815
Tumor
-0.2
525
Tumor
-0.2
925
Tumor
-0.2
515
Tumor
-0.2
627
Tumor
-0.2
877
Tumor
-0.2
545
Tumor
-0.2
823
Tumor
-0.3
553
Tumor
-0.3
113
Tumor
-0.3
953
Tumor
-0.3
695
Tumor
-0.3
617
Tumor
-0.3
1031
Tumor
-0.3
267
Tumor
-0.3
131
Tumor
-0.3
127
Tumor
-0.3
431
Tumor
-0.3
391
Tumor
-0.3
535
Tumor
-0.3
413
Tumor
-0.3
112
Tumor
-0.4
517
Tumor
-0.4
951
Tumor
-0.4
533
Tumor
-0.4
817
Tumor
-0.4
965
Tumor
-0.4
615
Tumor
-0.4
983
Tumor
-0.4
473
Tumor
-0.4
957
Tumor
-0.4
663
Tumor
-0.4
331
Tumor
-0.4
1043
Tumor
-0.5
477
Tumor
-0.5
393
Tumor
-0.5
1025
Tumor
-0.5
367
Tumor
-0.5
537
Tumor
-0.6
865
Tumor
-0.6
285
Tumor
-0.6
743
Tumor
-0.7
661
Tumor
-0.7
937
Tumor
-0.7
967
Tumor
-0.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
