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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS6KA1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
77.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
49.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
37.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
35.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
35.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
34.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
34.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
29.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
27.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
26.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
26.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
26.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
22.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
21.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
19.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
19.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
18.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
16.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
15.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
15.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
15.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
14.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
13.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
13.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
13.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
12.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
12.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
10.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
10.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
10.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
9.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
8.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
8.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
8.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
7.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
7.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
6.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
6.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
6.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
6.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
5.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
5.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
5.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
5.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
5.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
5.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
5.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
5.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
4.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
4.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
3.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS6KA1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
33.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
29.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
28.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
22.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
22.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
21.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
20.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
20.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
19.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
18.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
18.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
18.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
17.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
17.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
17.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
17.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
17.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
17.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
17.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
17.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
17.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
17.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
17.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
17.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
16.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
16.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
16.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
16.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
16.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
15.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
15.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
15.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
15.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
15.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
14.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
14.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
14.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
14.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
14.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
14.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
14.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
14.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
14.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
14.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
14.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
14.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
14.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
14.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
14.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
14.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
14.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
13.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
13.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
13.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
13.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
13.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
13.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
13.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
13.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
13.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
13.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
13.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
12.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
12.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
12.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
12.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
12.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
12.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
12.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
12.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
12.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
12.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
12.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
12.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
12.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
12.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
12.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
11.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
11.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
11.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
11.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
11.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
11.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
11.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
11.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
11.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
11.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
11.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
11.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
11.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
11.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
11.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
11.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
11.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
11.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
11.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
11.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
11.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
11.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
11.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
11.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
11.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
11.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
11.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
11.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
11.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
11.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
11.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
10.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
10.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
10.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
10.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
10.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
10.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
10.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
10.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
10.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
10.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
10.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
10.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
10.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
10.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
10.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
10.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
10.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
10.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
10.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
10.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
10.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
10.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
10.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
10.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
10.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
10.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
10.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
10.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
9.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
9.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
9.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
9.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
9.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
9.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
9.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
9.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
9.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
9.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
9.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
9.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
9.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
9.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
9.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
9.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
9.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
9.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
9.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
9.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
9.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
9.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
9.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
9.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
9.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
9.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
9.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
9.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
9.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
9.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
9.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
9.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
9.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
9.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
9.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
9.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
9.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
9.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
9.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
9.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
9.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
9.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
9.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
9.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
9.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
9.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
9.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
8.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
8.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
8.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
8.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
8.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
8.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
8.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
8.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
8.9
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
8.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
8.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
8.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
8.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
8.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
8.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
8.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
8.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
8.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
8.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
8.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
8.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
8.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
8.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
8.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
8.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
8.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
8.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
8.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
8.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
8.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
8.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
8.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
8.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
8.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
8.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
8.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
8.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
8.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
8.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
8.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
8.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
8.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
8.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
8.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
8.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
8.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
8.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
8.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
8.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
8.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
8.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
8.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
8.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
8.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
8.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
8.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
8.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
8.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
8.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
8.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
8.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
7.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
7.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
7.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
7.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
7.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
7.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
7.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
7.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
7.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
7.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
7.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
7.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
7.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
7.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
7.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
7.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
7.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
7.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
7.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
7.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
7.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
7.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
7.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
7.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
7.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
7.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
7.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
7.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
7.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
7.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
7.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
7.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
7.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
7.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
7.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
7.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
7.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
7.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
7.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
7.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
7.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
7.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
7.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
7.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
7.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
7.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
7.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
7.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
7.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
6.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
6.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
6.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
6.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
6.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
6.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
6.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
6.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
6.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
6.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
6.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
6.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
6.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
6.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
6.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
6.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
6.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
6.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
6.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
6.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
6.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
6.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
6.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
6.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
6.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
6.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
6.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
6.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
6.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
6.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
6.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
6.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
6.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
6.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
6.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
6.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
6.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
6.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
6.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
6.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
6.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
6.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
6.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
6.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
6.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
6.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
6.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
6.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
6.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
6.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
6.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
6.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
6.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
6.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
6.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
6.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
6.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
6.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
6.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
5.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
5.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
5.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
5.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
5.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
5.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
5.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
5.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
5.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
5.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
5.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
5.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
5.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
5.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
5.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
5.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
5.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
5.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
5.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
5.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
5.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
5.3
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
5.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
5.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
5.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
5.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
5.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
5.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
5.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
5.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
5.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
5.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
5.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
5.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
5.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
5.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
5.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.0
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
5.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
4.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
4.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
4.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
4.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
4.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
4.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
4.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
4.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
4.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
4.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
4.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
4.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
4.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
4.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
4.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
4.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
4.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
4.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
4.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
4.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
4.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
4.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
4.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
4.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
4.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
4.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
4.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
3.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
3.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
3.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
3.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
3.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
3.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
3.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
3.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
3.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
3.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
2.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
2.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
1.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS6KA1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
32.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
26.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
21.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
21.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
20.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
18.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
18.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
18.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
17.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
17.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
17.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
15.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
14.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
14.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
14.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
14.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
13.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
13.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
13.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
12.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
12.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
12.7
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
12.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
12.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
12.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
12.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
12.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
11.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
11.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
11.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
11.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
11.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
11.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
11.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
11.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
11.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
11.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
11.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
11.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
10.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
10.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
10.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
10.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
10.5
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
10.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
10.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
10.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
10.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
9.9
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
9.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
9.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
9.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
9.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
9.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
9.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
9.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
9.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
8.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
8.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
8.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
8.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
8.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
8.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
8.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
8.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
8.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
7.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
7.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
7.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
7.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
7.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
7.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
7.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
7.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
7.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
7.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
7.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
7.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
7.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
7.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
6.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
6.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
6.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
6.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
6.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
6.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
6.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
5.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
5.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
5.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
5.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS6KA1 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
66.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
64.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
55.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
52.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
51.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
51.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
51.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
50.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
50.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
50.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
49.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
49.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
48.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
48.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
48.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
46.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
46.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
43.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
41.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
40.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
39.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
39.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
39.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
38.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
36.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
36.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
36.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
35.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
35.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
33.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
33.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
31.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
31.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
30.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
30.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
30.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
30.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
29.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
28.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
28.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
28.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
28.5
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
28.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
28.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
28.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
27.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
27.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
27.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
27.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
27.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
27.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
27.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
27.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
27.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
26.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
26.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
26.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
26.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
25.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
25.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
25.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
25.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
25.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
25.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
25.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
25.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
25.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
24.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
24.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
24.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
24.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
24.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
24.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
24.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
23.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
23.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
23.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
23.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
23.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
23.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
23.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
23.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
23.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
22.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
22.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
22.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
22.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
22.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
22.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
22.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
22.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
22.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
22.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
22.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
22.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
22.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
22.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
22.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
22.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
22.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
22.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
22.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
22.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
22.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
22.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
22.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
21.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
21.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
21.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
21.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
21.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
21.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
21.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
21.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
21.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
21.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
21.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
21.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
21.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
21.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
21.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
21.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
20.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
20.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
20.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
20.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
20.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
20.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
20.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
20.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
20.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
20.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
20.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
20.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
20.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
20.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
19.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
19.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
19.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
19.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
19.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
19.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
19.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
19.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
19.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
19.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
19.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
19.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
19.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
19.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
19.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
18.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
18.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
18.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
18.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
18.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
18.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
18.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
18.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
18.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
18.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
18.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
18.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
18.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
18.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
18.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
18.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
18.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
18.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
18.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
17.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
17.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
17.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
17.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
17.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
17.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
17.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
17.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
16.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
16.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
16.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
16.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
16.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
16.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
16.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
15.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
15.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
15.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
15.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
15.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
15.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
15.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
15.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
14.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
14.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
14.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
14.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
14.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
14.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
14.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
14.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
14.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
14.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
14.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
13.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
13.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
13.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
13.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
13.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
13.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
13.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
13.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
13.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
13.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
12.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
12.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
12.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
12.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
12.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
12.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
11.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
11.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
11.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
11.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
11.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
11.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
11.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
10.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
10.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
10.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
10.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
10.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
10.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
10.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
10.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
10.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
9.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
8.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
8.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
7.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
7.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
7.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
7.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
6.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
6.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
6.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
6.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
6.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
6.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
4.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
3.5
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078800003
Tumor
0.6
CPT0009080003
Normal
0.5
CPT0079430001
Normal
0.5
CPT0006730001
Normal
0.5
CPT0017450001
Normal
0.4
CPT0001350001
Normal
0.4
CPT0012770003
Normal
0.4
CPT0082010001
Normal
0.4
CPT0092800003
Normal
0.4
CPT0088920001
Normal
0.4
CPT0024670003
Tumor
0.4
CPT0077500001
Normal
0.4
CPT0066430001
Normal
0.4
CPT0078830003
Tumor
0.4
CPT0000790001
Normal
0.4
CPT0012090003
Normal
0.4
CPT0063640001
Normal
0.4
CPT0002270011
Tumor
0.4
CPT0077140001
Normal
0.3
CPT0018250001
Normal
0.3
CPT0001230001
Normal
0.3
CPT0001190001
Normal
0.3
CPT0014350001
Normal
0.3
CPT0023710001
Normal
0.3
CPT0013790003
Normal
0.3
CPT0009020003
Normal
0.3
CPT0075570001
Normal
0.3
CPT0010170001
Normal
0.3
CPT0076350001
Normal
0.3
CPT0026420001
Normal
0.3
CPT0023360001
Normal
0.3
CPT0065820001
Normal
0.3
CPT0014130001
Normal
0.3
CPT0025050003
Tumor
0.3
CPT0007870001
Normal
0.3
CPT0012570003
Normal
0.3
CPT0025610001
Normal
0.3
CPT0079000001
Normal
0.3
CPT0092740003
Normal
0.3
CPT0006530001
Normal
0.3
CPT0012920003
Normal
0.2
CPT0078840001
Normal
0.2
CPT0065450001
Normal
0.2
CPT0025060001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0088480003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0088570001
Normal
0.2
CPT0014450004
Tumor
0.2
CPT0081620001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0007470001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0012640003
Normal
0.2
CPT0087050003
Normal
0.2
CPT0092310003
Normal
0.2
CPT0086370003
Normal
0.2
CPT0078940001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0078670001
Normal
0.2
CPT0000660001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0001180009
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0065430003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0025110003
Tumor
0.1
CPT0078660003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0012180003
Tumor
0.1
CPT0088550004
Tumor
0.1
CPT0064400001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0019160001
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0088500001
Normal
0.1
CPT0012280003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0086890003
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0002370001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0065750003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0065810003
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0088970003
Tumor
-0.1
CPT0088900003
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0014160003
Tumor
-0.1
CPT0011410003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0092290003
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0009060003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0012900004
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0001260009
Tumor
-0.2
CPT0078930003
Tumor
-0.2
CPT0002350011
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0017850003
Tumor
-0.2
CPT0079480003
Tumor
-0.2
CPT0066470004
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0009000003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0063630003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0088690003
Tumor
-0.3
CPT0092790003
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0075130003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0084560003
Tumor
-0.3
CPT0079180003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0089460004
Tumor
-0.3
CPT0025290003
Tumor
-0.3
CPT0012550003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0081990003
Tumor
-0.3
CPT0019990003
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0065930003
Tumor
-0.3
CPT0007860003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0087040003
Tumor
-0.4
CPT0088630003
Tumor
-0.4
CPT0006630003
Tumor
-0.4
CPT0066480003
Tumor
-0.4
CPT0075560003
Tumor
-0.4
CPT0012670003
Tumor
-0.4
CPT0001340003
Tumor
-0.4
CPT0092730003
Tumor
-0.4
CPT0077490003
Tumor
-0.4
CPT0011240003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0015910003
Tumor
-0.5
CPT0086950003
Tumor
-0.5
CPT0025880003
Tumor
-0.5
CPT0025350003
Tumor
-0.5
CPT0089020003
Tumor
-0.5
CPT0085670003
Tumor
-0.5
CPT0088760003
Tumor
-0.5
CPT0065870003
Tumor
-0.5
CPT0017410003
Tumor
-0.5
CPT0015730003
Tumor
-0.6
CPT0086820003
Tumor
-0.7
CPT0065690003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.