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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FAAH is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
46.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
45.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
45.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
41.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
39.8
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
39.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
37.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
36.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
35.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
35.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
35.2
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
34.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
33.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
30.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
30.6
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
30.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
29.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
29.7
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
29.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
29.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
29.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
28.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
28.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
28.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
28.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
28.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
28.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
28.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
28.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
27.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
27.3
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
27.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
26.8
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
26.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
26.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
26.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
26.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
26.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
25.9
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
25.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
24.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
24.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
24.3
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
24.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
24.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
24.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
23.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
23.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
23.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
23.4
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
23.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
23.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
23.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
23.1
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
22.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
22.9
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
22.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
22.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
22.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
22.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
22.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
22.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
21.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
21.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
21.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
21.6
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
21.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
21.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
21.4
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
21.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
21.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
21.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
20.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
20.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
20.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
20.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
20.2
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
19.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
19.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
19.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
19.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
19.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
19.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
19.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
18.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
18.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
18.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
18.7
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
18.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
18.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
18.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
18.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
18.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
17.9
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
17.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
17.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
17.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
17.7
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
17.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
17.5
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
17.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
17.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
16.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
16.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
16.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
16.7
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
16.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
16.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
16.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
16.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
16.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
16.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
16.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
16.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
16.1
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
16.0
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
15.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
15.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
15.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
15.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
15.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
15.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
15.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
14.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
14.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
14.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
14.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
14.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
14.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
14.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
14.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
14.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
14.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
13.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
13.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
13.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
13.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
13.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
13.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
13.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
13.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
13.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
13.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
13.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
12.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
12.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
12.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
12.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
12.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
12.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
12.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
12.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
12.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
12.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
12.3
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
12.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
12.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
12.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
12.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
12.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
12.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
12.0
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
12.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
11.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
11.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
11.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
11.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
11.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
11.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
11.6
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
11.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
11.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
11.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
11.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
11.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
11.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
11.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
11.3
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
11.2
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
11.2
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
11.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
11.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
11.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
11.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
10.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
10.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
10.6
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
10.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
10.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
10.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
10.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
10.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
10.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
10.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
10.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
10.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
10.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
10.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
10.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
10.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
9.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
9.8
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
9.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
9.7
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
9.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
9.7
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
9.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
9.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
9.4
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
9.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
9.4
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
9.4
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
9.4
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
9.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
9.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
9.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
9.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
9.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
9.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
9.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
9.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
9.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
9.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
9.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
9.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
9.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
8.9
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
8.9
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
8.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
8.9
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
8.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
8.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
8.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
8.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
8.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
8.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
8.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
8.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
8.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
8.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
8.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
8.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
8.3
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
8.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
8.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
8.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
8.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
8.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
8.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
7.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.7
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
7.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
7.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
7.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
7.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
7.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
7.3
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
7.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
7.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
7.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
7.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
7.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
7.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
6.8
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
6.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
6.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
6.5
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
6.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
6.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
6.3
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
6.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
6.3
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
6.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
6.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
6.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
6.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
5.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
5.9
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
5.8
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
5.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.5
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
5.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
5.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
5.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
5.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
5.2
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
5.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
5.1
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
5.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
5.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
5.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
5.0
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
4.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
4.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
4.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
4.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
4.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
4.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
4.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
4.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
4.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
4.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
4.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
4.2
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
4.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
4.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
4.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
4.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
3.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
3.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
3.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
3.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
3.5
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
3.5
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
3.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
3.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
3.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
3.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
3.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
2.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
2.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
2.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
2.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
2.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
2.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
2.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
2.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
2.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
2.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
2.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
1.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
1.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
1.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
1.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
1.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
0.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
0.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
FAAH is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.5
Number of samples
231
Samples
Sample
Description
TPM
DO45149
0 years, female, NA, stage:2, alive, 1260 days
163.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
93.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
54.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
49.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
47.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
47.6
DO23516
0 years, male, NA, stage:3, dead, 20 days
46.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
44.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
43.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
43.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
41.9
DO50817
0 years, male, NA, stage:2, alive, 390 days
41.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
41.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
35.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
34.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
32.6
DO23512
0 years, male, NA, stage:1, alive, 1260 days
32.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
31.8
DO23537
0 years, male, NA, stage:2, dead, 900 days
31.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
31.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
31.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
31.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
30.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
30.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
29.6
DO227643
0 years, male, NA, stage:2, alive, 1260 days
28.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
28.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
28.7
DO48674
0 years, male, NA, stage:2, alive, 1260 days
28.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
27.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
27.4
DO45297
0 years, female, NA, stage:4, dead, 1260 days
27.0
DO23517
0 years, male, NA, stage:2, alive, 1200 days
26.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
26.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
26.2
DO50802
0 years, male, NA, stage:2, alive, 930 days
26.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
25.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
25.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
25.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
25.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
25.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
25.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
24.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
24.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
23.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
23.1
DO50787
0 years, male, NA, stage:3, alive, 480 days
22.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
22.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
22.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
22.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
21.8
DO23543
0 years, male, NA, stage:2, alive, 1020 days
21.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
21.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
21.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
21.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
21.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
20.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
20.8
DO23531
0 years, female, NA, stage:3, alive, 900 days
20.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
20.3
DO45209
0 years, male, NA, stage:4, alive, 1350 days
20.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
19.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
19.8
DO23552
0 years, female, NA, stage:1, alive, 810 days
19.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
19.6
DO45171
0 years, male, NA, stage:3, alive, 600 days
19.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
19.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
18.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
18.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
18.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
18.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
18.1
DO48760
0 years, female, NA, stage:2, alive, 690 days
18.0
DO45179
0 years, female, NA, stage:2, alive, 600 days
17.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
17.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
17.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
17.2
DO50809
0 years, male, NA, stage:3, dead, 720 days
17.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
17.0
DO45095
0 years, male, NA, stage:2, alive, 1620 days
16.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
16.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
16.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
16.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
16.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
16.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
16.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
16.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
16.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
16.0
DO45111
0 years, male, NA, stage:2, alive, 1590 days
15.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
15.5
DO23547
0 years, male, NA, stage:1, alive, 1020 days
15.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
15.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
15.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
15.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
15.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
15.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
15.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
15.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
14.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
14.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
14.6
DO23544
0 years, male, NA, stage:2, alive, 960 days
14.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
14.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
13.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
13.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
13.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
13.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
13.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
13.6
DO45233
0 years, male, NA, stage:3, alive, 900 days
13.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
13.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
13.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
13.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
13.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
12.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
12.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
12.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
12.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
12.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
12.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
12.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
12.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
12.3
DO48721
0 years, female, NA, stage:1, alive, 900 days
12.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
12.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
12.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
11.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
11.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
11.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
11.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
11.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
11.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
11.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
11.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
11.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
11.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
11.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
11.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
10.9
DO48682
0 years, female, NA, stage:3, dead, 120 days
10.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
10.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
10.4
DO45119
0 years, male, NA, stage:3, dead, 510 days
10.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
10.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
10.2
DO45165
0 years, male, NA, stage:2, alive, 690 days
10.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
10.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
10.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
10.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
10.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
10.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
10.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
10.0
DO23518
0 years, male, NA, stage:2, alive, 1320 days
9.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
9.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
9.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
9.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
9.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
9.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
9.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
8.9
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
8.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
8.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
8.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
8.8
DO45155
0 years, male, NA, stage:2, alive, 2160 days
8.7
DO48733
0 years, male, NA, stage:2, alive, 600 days
8.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
8.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
8.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
8.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
8.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
8.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
8.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
7.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
7.8
DO45279
0 years, male, NA, stage:3, alive, 1290 days
7.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
7.6
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
7.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
7.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
7.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
7.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
7.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
7.0
DO45161
0 years, male, NA, stage:2, dead, 540 days
6.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
6.9
DO45239
0 years, male, NA, stage:2, alive, 870 days
6.9
DO45221
0 years, female, NA, stage:4, dead, 390 days
6.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
6.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
6.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
6.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
6.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
6.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
6.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
6.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
5.9
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
5.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
5.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
5.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
5.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
5.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
4.9
DO50820
0 years, female, NA, stage:3, alive, 510 days
4.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
4.8
DO45145
0 years, male, NA, stage:3, dead, 60 days
4.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
4.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
4.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
4.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
4.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
4.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
4.1
DO48720
0 years, female, NA, stage:2, alive, 570 days
4.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
4.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
3.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
3.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
3.6
DO23509
0 years, male, NA, stage:3, dead, 780 days
3.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
3.4
DO45287
0 years, male, NA, stage:1, alive, 390 days
3.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
3.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
3.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
2.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
2.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
0.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
627
Tumor
1.9
615
Tumor
1.5
755
Tumor
1.3
162
Normal
1.1
698
Normal
1.0
423
Tumor
1.0
867
Tumor
1.0
466
Normal
1.0
278
Normal
1.0
357
Tumor
1.0
515
Tumor
1.0
1022
Normal
0.9
481
Tumor
0.9
436
Normal
0.9
746
Normal
0.9
857
Tumor
0.9
426
Normal
0.9
878
Normal
0.9
954
Normal
0.8
132
Normal
0.8
114
Normal
0.8
955
Tumor
0.8
685
Tumor
0.8
642
Normal
0.8
356
Normal
0.8
818
Normal
0.8
636
Normal
0.7
412
Normal
0.7
328
Normal
0.7
358
Normal
0.7
744
Normal
0.7
741
Tumor
0.7
915
Tumor
0.7
912
Normal
0.7
911
Tumor
0.7
952
Normal
0.7
452
Normal
0.7
448
Normal
0.7
938
Normal
0.7
924
Normal
0.7
861
Tumor
0.7
365
Tumor
0.7
482
Normal
0.7
488
Normal
0.7
196
Normal
0.7
616
Normal
0.7
142
Normal
0.7
393
Tumor
0.7
568
Normal
0.7
785
Tumor
0.6
648
Normal
0.6
414
Normal
0.6
868
Normal
0.6
696
Normal
0.6
138
Normal
0.6
111
Normal
0.6
416
Normal
0.6
128
Normal
0.6
484
Normal
0.6
953
Tumor
0.6
958
Normal
0.6
882
Normal
0.6
862
Normal
0.6
214
Normal
0.6
513
Tumor
0.5
462
Normal
0.5
186
Normal
0.5
428
Normal
0.5
728
Normal
0.5
866
Normal
0.5
422
Normal
0.5
944
Normal
0.5
742
Normal
0.5
914
Normal
0.5
268
Normal
0.5
362
Normal
0.5
314
Normal
0.5
366
Normal
0.5
498
Normal
0.5
824
Normal
0.5
964
Normal
0.5
342
Normal
0.5
222
Normal
0.5
456
Normal
0.5
124
Normal
0.4
981
Tumor
0.4
424
Normal
0.4
126
Normal
0.4
852
Normal
0.4
516
Normal
0.4
922
Normal
0.4
564
Normal
0.4
686
Normal
0.4
574
Normal
0.4
146
Normal
0.4
863
Tumor
0.4
137
Tumor
0.4
816
Normal
0.4
1014
Normal
0.4
272
Normal
0.4
1042
Normal
0.4
727
Tumor
0.4
926
Normal
0.4
618
Normal
0.4
478
Normal
0.4
966
Normal
0.4
444
Normal
0.4
1027
Tumor
0.3
258
Normal
0.3
344
Normal
0.3
777
Tumor
0.3
714
Normal
0.3
354
Normal
0.3
312
Normal
0.3
286
Normal
0.3
647
Tumor
0.3
461
Tumor
0.3
628
Normal
0.3
1046
Normal
0.3
352
Normal
0.3
977
Tumor
0.3
376
Normal
0.3
228
Normal
0.3
1016
Normal
0.3
212
Normal
0.3
364
Normal
0.2
672
Normal
0.2
968
Normal
0.2
224
Normal
0.2
1032
Normal
0.2
557
Tumor
0.2
446
Normal
0.2
487
Tumor
0.2
388
Normal
0.2
384
Normal
0.2
534
Normal
0.2
261
Tumor
0.2
978
Normal
0.2
492
Normal
0.2
188
Normal
0.2
518
Normal
0.2
546
Normal
0.2
864
Normal
0.2
491
Tumor
0.2
874
Normal
0.1
554
Normal
0.1
572
Normal
0.1
231
Tumor
0.1
984
Normal
0.1
396
Normal
0.1
415
Tumor
0.1
361
Tumor
0.1
433
Tumor
0.1
145
Tumor
0.1
662
Normal
0.1
943
Tumor
0.1
913
Tumor
0.1
1045
Tumor
0.1
723
Tumor
0.1
262
Normal
0.1
464
Normal
0.1
218
Normal
0.1
738
Normal
0.1
514
Normal
0.1
858
Normal
0.1
232
Normal
0.1
786
Normal
0.1
558
Normal
0.1
722
Normal
0.1
756
Normal
0.1
332
Normal
0.0
353
Tumor
0.0
716
Normal
0.0
524
Normal
0.0
298
Normal
0.0
472
Normal
0.0
865
Tumor
0.0
195
Tumor
0.0
536
Normal
0.0
136
Normal
0.0
327
Tumor
0.0
112
Tumor
0.0
161
Tumor
0.0
526
Normal
0.0
884
Normal
0.0
447
Tumor
0.0
664
Normal
0.0
528
Normal
0.0
873
Tumor
-0.1
434
Normal
-0.1
982
Normal
-0.1
257
Tumor
-0.1
563
Tumor
-0.1
918
Normal
-0.1
778
Normal
-0.1
435
Tumor
-0.1
976
Normal
-0.1
956
Normal
-0.1
916
Normal
-0.1
411
Tumor
-0.1
538
Normal
-0.1
284
Normal
-0.1
1041
Tumor
-0.1
883
Tumor
-0.1
957
Tumor
-0.2
394
Normal
-0.2
185
Tumor
-0.2
187
Tumor
-0.2
141
Tumor
-0.2
445
Tumor
-0.2
823
Tumor
-0.2
297
Tumor
-0.2
341
Tumor
-0.2
745
Tumor
-0.2
527
Tumor
-0.2
192
Normal
-0.2
477
Tumor
-0.2
172
Normal
-0.2
343
Tumor
-0.2
1044
Normal
-0.2
125
Tumor
-0.2
368
Normal
-0.2
1015
Tumor
-0.2
553
Tumor
-0.3
663
Tumor
-0.3
271
Tumor
-0.3
666
Normal
-0.3
455
Tumor
-0.3
721
Tumor
-0.3
737
Tumor
-0.3
921
Tumor
-0.3
313
Tumor
-0.3
697
Tumor
-0.3
1026
Normal
-0.3
191
Tumor
-0.4
386
Normal
-0.4
925
Tumor
-0.4
468
Normal
-0.4
277
Tumor
-0.4
641
Tumor
-0.4
695
Tumor
-0.4
465
Tumor
-0.4
217
Tumor
-0.4
171
Tumor
-0.4
113
Tumor
-0.4
494
Normal
-0.4
951
Tumor
-0.5
474
Normal
-0.5
395
Tumor
-0.5
635
Tumor
-0.5
483
Tumor
-0.5
213
Tumor
-0.5
963
Tumor
-0.5
1021
Tumor
-0.5
881
Tumor
-0.5
451
Tumor
-0.5
123
Tumor
-0.6
221
Tumor
-0.6
1043
Tumor
-0.7
665
Tumor
-0.7
923
Tumor
-0.7
432
Normal
-0.7
355
Tumor
-0.7
131
Tumor
-0.7
975
Tumor
-0.7
351
Tumor
-0.7
375
Tumor
-0.7
937
Tumor
-0.7
267
Tumor
-0.7
1013
Tumor
-0.7
148
Normal
-0.8
567
Tumor
-0.8
815
Tumor
-0.8
545
Tumor
-0.8
392
Normal
-0.8
617
Tumor
-0.8
135
Tumor
-0.8
467
Tumor
-0.8
431
Tumor
-0.8
427
Tumor
-0.9
421
Tumor
-0.9
817
Tumor
-0.9
223
Tumor
-0.9
573
Tumor
-0.9
127
Tumor
-0.9
713
Tumor
-0.9
525
Tumor
-0.9
413
Tumor
-1.0
851
Tumor
-1.0
877
Tumor
-1.0
523
Tumor
-1.0
211
Tumor
-1.0
814
Normal
-1.0
471
Tumor
-1.1
383
Tumor
-1.1
917
Tumor
-1.1
1028
Normal
-1.1
497
Tumor
-1.2
391
Tumor
-1.2
463
Tumor
-1.2
227
Tumor
-1.2
493
Tumor
-1.2
965
Tumor
-1.2
571
Tumor
-1.3
473
Tumor
-1.3
533
Tumor
-1.3
813
Tumor
-1.3
443
Tumor
-1.3
517
Tumor
-1.3
1025
Tumor
-1.3
283
Tumor
-1.4
671
Tumor
-1.4
743
Tumor
-1.4
661
Tumor
-1.4
363
Tumor
-1.4
385
Tumor
-1.4
387
Tumor
-1.5
724
Normal
-1.5
983
Tumor
-1.5
715
Tumor
-1.6
311
Tumor
-1.6
425
Tumor
-1.6
367
Tumor
-1.7
147
Tumor
-1.7
537
Tumor
-1.9
285
Tumor
-1.9
967
Tumor
-1.9
535
Tumor
-2.0
331
Tumor
-2.0
1031
Tumor
-2.2
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
