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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSPAN1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
176.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
135.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
100.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
93.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
88.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
85.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
79.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
72.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
72.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
71.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
68.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
65.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
61.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
60.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
59.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
58.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
57.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
55.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
53.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
49.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
47.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
46.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
44.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
43.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
42.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
40.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
37.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
37.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
36.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
36.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
36.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
36.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
35.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
33.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
32.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
32.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
31.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
31.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
26.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
23.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
22.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
21.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
20.2
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
20.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
19.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
19.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
19.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
18.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
13.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
13.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
12.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
12.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
12.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
12.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
11.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
11.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
8.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
5.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSPAN1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
109.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
1619.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
947.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
908.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
651.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
643.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
621.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
609.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
592.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
572.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
522.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
509.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
502.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
499.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
492.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
480.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
448.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
446.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
444.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
443.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
428.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
428.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
423.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
411.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
402.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
385.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
376.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
375.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
375.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
365.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
358.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
353.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
350.3
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
347.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
347.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
339.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
338.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
333.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
328.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
325.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
319.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
308.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
304.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
301.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
300.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
293.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
293.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
286.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
280.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
272.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
271.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
264.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
257.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
248.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
246.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
244.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
244.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
243.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
241.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
236.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
233.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
231.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
231.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
231.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
230.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
229.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
228.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
227.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
225.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
221.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
221.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
220.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
220.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
219.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
214.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
213.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
211.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
204.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
201.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
199.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
198.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
198.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
195.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
194.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
191.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
189.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
188.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
187.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
184.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
184.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
184.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
183.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
183.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
182.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
181.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
181.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
181.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
179.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
174.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
172.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
172.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
172.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
169.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
168.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
167.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
167.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
167.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
166.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
165.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
164.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
164.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
164.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
163.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
162.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
159.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
159.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
159.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
156.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
156.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
155.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
154.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
153.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
151.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
150.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
148.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
147.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
146.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
145.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
145.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
145.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
144.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
141.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
141.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
141.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
141.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
140.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
139.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
138.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
138.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
137.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
137.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
136.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
135.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
134.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
132.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
132.2
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
132.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
131.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
130.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
129.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
128.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
128.3
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
124.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
123.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
121.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
121.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
120.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
120.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
119.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
119.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
119.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
118.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
118.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
117.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
117.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
117.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
116.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
116.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
114.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
114.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
113.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
113.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
111.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
110.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
110.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
109.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
109.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
109.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
109.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
108.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
108.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
108.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
106.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
106.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
104.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
104.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
103.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
103.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
103.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
102.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
101.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
101.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
99.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
98.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
98.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
98.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
97.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
96.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
96.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
95.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
95.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
94.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
92.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
91.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
90.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
90.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
90.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
89.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
89.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
89.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
88.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
87.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
85.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
85.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
85.2
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
85.1
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
84.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
84.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
84.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
84.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
83.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
83.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
82.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
82.7
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
82.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
82.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
82.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
82.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
79.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
79.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
77.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
76.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
75.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
75.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
75.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
75.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
75.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
74.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
73.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
73.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
73.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
73.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
72.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
72.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
71.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
71.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
70.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
70.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
69.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
69.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
69.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
68.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
68.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
68.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
67.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
67.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
64.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
64.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
64.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
63.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
63.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
62.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
62.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
61.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
61.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
60.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
60.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
60.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
59.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
59.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
58.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
58.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
58.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
58.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
57.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
56.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
56.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
55.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
55.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
55.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
55.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
55.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
54.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
53.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
53.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
53.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
52.2
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
52.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
51.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
51.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
51.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
50.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
50.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
50.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
49.5
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
49.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
49.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
49.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
48.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
47.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
47.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
47.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
46.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
46.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
46.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
45.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
45.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
44.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
44.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
44.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
44.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
43.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
43.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
42.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
42.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
42.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
42.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
42.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
42.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
42.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
41.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
41.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
40.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
40.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
40.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
39.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
39.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
39.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
39.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
39.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
38.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
38.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
38.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
38.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
37.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
37.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
37.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
37.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
36.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
36.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
36.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
36.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
36.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
35.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
35.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
34.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
34.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
33.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
33.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
33.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
32.9
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
32.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
32.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
31.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
31.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
31.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
31.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
31.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
30.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
30.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
30.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
29.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
29.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
28.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
28.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
28.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
27.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
27.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
26.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
26.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
26.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
25.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
25.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
25.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
25.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
24.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
24.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
23.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
23.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
23.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
23.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
23.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
22.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
22.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
22.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
22.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
22.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
21.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
21.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
21.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
21.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
21.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
20.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
20.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
20.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
19.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
19.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
19.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
18.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
18.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
18.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
17.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
17.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
17.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
17.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
16.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
16.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
16.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
15.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
15.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
15.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
15.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
15.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
15.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
15.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
15.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
15.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
15.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
14.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
14.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
13.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
13.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
13.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
12.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
12.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
12.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
12.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
12.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
12.1
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
12.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
10.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
10.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
10.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
10.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
10.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
9.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
9.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
8.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
8.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
8.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
8.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
8.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
8.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
7.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
7.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
7.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
6.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
6.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
5.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
5.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
5.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
5.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
5.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
5.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
4.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
4.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
4.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
4.5
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
4.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
3.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
3.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
3.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
3.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
3.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
3.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
2.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
2.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
2.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
2.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
2.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
2.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
2.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
2.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
2.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
2.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
2.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
2.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
2.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
2.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
1.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
1.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
1.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
1.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
1.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
1.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
1.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
1.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
1.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
1.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
1.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
1.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
1.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
0.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
0.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
0.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
0.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
0.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSPAN1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
122.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
681.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
504.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
497.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
451.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
447.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
407.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
368.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
366.1
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
365.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
293.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
293.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
291.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
287.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
285.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
285.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
284.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
265.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
240.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
235.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
233.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
224.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
198.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
196.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
193.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
192.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
186.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
159.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
147.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
147.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
144.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
131.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
129.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
129.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
123.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
123.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
121.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
114.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
113.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
108.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
105.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
104.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
103.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
103.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
100.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
93.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
87.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
85.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
83.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
82.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
80.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
77.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
75.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
74.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
70.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
69.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
64.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
64.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
57.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
54.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
51.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
47.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
43.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
41.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
39.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
35.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
31.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
29.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
25.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
25.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
24.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
23.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
22.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
18.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
16.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
14.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
13.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
13.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
12.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
10.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
8.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
8.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
8.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
8.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
7.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
7.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
6.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
6.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
5.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
4.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
4.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
4.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
4.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
2.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
2.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
1.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
1.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
1.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSPAN1 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
427.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
1575.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
1273.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
1244.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
1211.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
1080.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
1051.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
1038.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
1009.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
955.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
954.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
933.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
932.7
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
918.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
901.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
898.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
866.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
858.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
856.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
854.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
843.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
833.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
807.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
782.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
782.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
779.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
776.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
769.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
760.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
757.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
752.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
742.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
723.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
715.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
713.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
702.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
702.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
701.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
699.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
687.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
687.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
685.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
682.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
679.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
675.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
674.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
669.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
665.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
660.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
659.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
654.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
651.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
651.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
650.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
648.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
648.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
646.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
638.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
637.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
636.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
631.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
630.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
630.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
625.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
621.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
614.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
613.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
610.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
607.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
604.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
604.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
603.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
602.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
600.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
598.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
585.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
580.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
578.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
575.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
573.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
571.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
559.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
557.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
550.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
549.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
549.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
548.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
547.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
546.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
544.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
544.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
543.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
542.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
541.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
540.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
538.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
536.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
535.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
526.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
525.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
523.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
522.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
519.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
514.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
512.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
510.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
497.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
493.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
493.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
488.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
487.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
486.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
481.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
480.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
479.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
479.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
474.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
472.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
471.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
470.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
470.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
469.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
466.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
464.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
460.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
460.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
458.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
453.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
448.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
447.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
447.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
445.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
442.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
441.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
440.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
434.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
432.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
429.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
427.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
422.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
419.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
419.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
418.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
414.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
409.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
409.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
405.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
402.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
401.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
395.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
392.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
389.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
386.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
385.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
382.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
379.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
376.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
372.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
372.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
370.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
368.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
357.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
355.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
355.7
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
355.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
352.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
352.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
348.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
348.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
347.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
347.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
347.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
345.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
340.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
339.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
334.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
330.2
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
327.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
327.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
321.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
319.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
318.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
315.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
305.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
304.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
304.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
303.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
302.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
302.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
300.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
298.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
294.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
292.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
292.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
291.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
291.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
287.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
279.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
279.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
277.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
276.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
275.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
274.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
254.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
253.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
253.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
252.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
251.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
243.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
241.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
230.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
229.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
226.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
221.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
214.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
214.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
214.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
211.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
210.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
207.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
206.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
189.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
184.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
177.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
172.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
163.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
160.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
159.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
156.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
149.7
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
149.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
148.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
144.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
143.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
137.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
126.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
125.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
121.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
121.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
118.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
118.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
117.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
114.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
112.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
109.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
109.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
105.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
104.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
98.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
87.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
86.5
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
82.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
78.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
76.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
75.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
73.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
69.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
68.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
67.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
65.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
59.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
57.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
53.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
47.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
43.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
41.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
36.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
33.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
31.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
23.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
21.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
21.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
14.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
13.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
10.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
10.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
9.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
9.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
7.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
